- Transcript 'Boleac.CG.SB_v3.S145...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S145.g02806.01.t
Possible name(s)
TGFBRAP1; VPS39
Gene model
Location
S145 [44,461 / 47,203]
Amino acid sequence
Length: 913
>Boleac.CG.SB_v3.S145.g02806.01.p
MTNAIKAFNLQLLVGRENIMGSKHKVSIESIDSRDKNLYIGTNDGSXYHFLILEDVAESP
GRAEPKFNSFLQAQTRISSKKAIVQIKASVXLKCLLVNADGLIQGYSMLDLSPSFAMLSR
VKNVNRFYINQHPVXSDPFSVEMYVTFIRKKNIQLYQVQEDXVVPLRDFSFHETPLSVAV
DGHFMCVGGTTSYFIYDTSSNKKQDLLPVEGGRAFVHRVASGEFLLAAPNSLGVFVTSDG
ISQRAPIQWAPDVAQACFVHPYVVALENQRVTVHSVLDQEAKQYWPFQGGVSIVKDSNSV
LLCTSKDVFILSLTPFSEQVSKLIEQGLIEEGLELAKECAKVIRRGPLRELLQMTYRKAG
FQYMKQFNFDKADEMYVKGEIDVREIISLYPNALPTGTTYVSHSPPYHKMKSVYDFSAES
PKYVEXCYQFLSQYLRNHILTNLMQSNATEYSKSNVNGGYINDVLMSAIAVFAKLHETNN
LXYVFHGSEDSSAITKCALSPHFSLFRSNSAVILKLLGSNECYHASADFKILLGHVDDAI
TEWKELVLNQKSDKDFPGPQFVADMLSHHYTKTDILWKHAEWMLHYDERIGITVFTSHVC
LQPEGDNDPKDLSSAFPKADEIIDFLHPFKDSVLHYLEHLVFVCQVQKEKYHTHLAVLYL
EIVLXSSDKNIDKYADIRKKFQKLLKESSLYRISLILGKVQDSNLFQEHVILCGKQGEHK
KALEILVNKMKDPAAAESYCLDQSEDFETRKDLFKALLKVYLNKITASSTANSKYVIAVA
DLLNRQAEFYNPLDVMHLLSNDWSMQLLHQFLSGTMLANIHTRWTSNIEKMLACGRLKAV
NNDLVTALQKSVLLTEDSLCGVCDSTFQDPDCVVYPNLVTVHPKCGTNKHVCPVTGKLFK
VENKPHNQSKQTE
Nucleotide sequence
Length: 2,742
>Boleac.CG.SB_v3.S145.g02806.01.t
ATGACAAATGCAATCAAGGCGTTCAACTTGCAACTTCTTGTTGGGAGAGAAAATATCATG
GGAAGCAAGCACAAAGTTTCCATTGAATCTATTGATTCTAGAGACAAAAACCTCTACATA
GGCACAAACGATGGCTCAATNTATCATTTTCTCATCCTTGAAGATGTTGCTGAAAGTCCT
GGACGGGCAGAACCCAAATTCAATTCATTTCTACAAGCGCAAACAAGAATATCTTCCAAG
AAAGCAATTGTTCAAATTAAAGCATCTGTTGNTTTGAAGTGTCTGCTTGTAAATGCAGAT
GGCTTAATACAGGGTTACAGTATGCTGGATCTAAGTCCGTCATTTGCAATGCTGAGTCGA
GTGAAAAACGTCAACAGGTTTTATATAAATCAACACCCTGTACNTTCTGATCCATTCTCT
GTTGAAATGTATGTTACTTTCATTAGAAAGAAGAATATTCAACTGTATCAAGTGCAAGAG
GACANTGTCGTACCTTTGAGAGATTTTTCTTTCCATGAAACACCACTTTCCGTGGCGGTC
GATGGTCATTTTATGTGTGTGGGTGGTACAACAAGTTATTTCATATATGATACCAGTTCT
AACAAGAAGCAAGACTTACTCCCCGTTGAAGGGGGGAGAGCATTTGTTCACAGAGTTGCT
TCAGGAGAGTTTCTTTTAGCAGCTCCAAATTCTCTTGGTGTTTTTGTTACATCAGACGGA
ATCTCCCAACGTGCTCCAATACAATGGGCACCTGATGTAGCNCAAGCATGTTTTGTCCAC
CCTTACGTCGTAGCTTTGGAAAATCAACGTGTCACAGTACATAGTGTGTTGGATCAAGAA
GCGAAACAATATTGGCCGTTTCAAGGGGGTGTGTCAATTGTAAAAGACAGCAACAGTGTT
CTGTTATGCACTAGTAAAGATGTATTCATTCTATCCCTTACACCATTTTCTGAACAAGTT
TCTAAGCTTATCGAACAGGGATTGATAGAAGAAGGGTTGGAGCTTGCAAAAGAATGCGCA
AAAGTAATTCGTAGAGGACCACTGCGCGAGTTGCTCCAAATGACGTATCGAAAAGCTGGA
TTTCAGTACATGAAACAATTCAACTTTGATAAAGCAGATGAGATGTATGTAAAAGGAGAG
ATTGATGTGAGAGAAATTATCTCATTATACCCCAATGCATTACCTACGGGAACAACTTAT
GTTTCACACTCACCACCATACCATAAAATGAAATCGGTATATGATTTTTCTGCTGAGTCA
CCAAAATATGTAGAAANATGCTATCAATTCTTGTCNCAGTATTTGCGCAATCATATTCTA
ACCAATCTGATGCAATCTAATGCAACAGAATACTCAAAAAGCAATGTAAATGGTGGATAT
ATTAATGATGTGTTAATGTCTGCAATTGCTGTTTTTGCCAAGTTACATGAGACCAATAAT
TTGCANTATGTTTTCCATGGCAGTGAGGACAGCAGTGCAATCACAAAGTGCGCTTTATCA
CCACATTTCAGTTTATTCAGATCAAATTCTGCTGTTATATTGAAGCTACTTGGCTCAAAC
GAATGCTATCATGCTTCAGCTGATTTCAAAATCCTCCTTGGACATGTTGATGATGCAATA
ACTGAGTGGAAAGAGTTGGTTTTAAATCAGAAATCTGACAAGGATTTCCCTGGTCCTCAA
TTTGTGGCTGATATGCTGAGTCATCATTACACAAAAACTGATATTTTGTGGAAACATGCT
GAATGGATGCTGCATTATGATGAAAGAATCGGCATTACTGTATTTACAAGCCATGTGTGT
CTACAGCCGGAAGGCGATAATGATCCTAAAGATTTGTCAAGTGCATTTCCTAAAGCAGAT
GAGATCATAGATTTTCTTCACCCATTCAAAGATTCCGTTCTGCATTATCTAGAGCATTTG
GTGTTTGTATGTCAAGTACAAAAAGAAAAATATCACACACACTTAGCTGTGTTGTATTTG
GAAATTGTCTTAANATCTTCAGACAAAAATATTGACAAGTACGCAGATATCAGAAAAAAG
TTTCAAAAATTACTCAAAGAATCAAGCCTGTATAGAATTTCATTGATATTAGGAAAAGTT
CAAGATTCTAATTTATTTCAAGAGCATGTGATCCTATGTGGAAAACAAGGAGAACACAAA
AAAGCATTGGAAATATTAGTGAATAAAATGAAAGACCCTGCAGCTGCCGAATCATATTGC
TTAGACCAAAGTGAGGATTTTGAAACAAGAAAAGATCTTTTCAAAGCTCTTCTGAAAGTC
TATCTAAATAAAATCACAGCTTCATCAACTGCAAATTCAAAGTATGTCATAGCGGTAGCA
GATCTGTTGAATCGACAGGCAGAATTCTATAACCCTCTCGATGTTATGCACTTACTTTCC
AATGATTGGTCAATGCAACTGCTACATCAATTCTTGTCAGGCACTATGCTGGCTAACATA
CATACGCGTTGGACAAGTAACATTGAAAAGATGCTTGCTTGTGGAAGATTGAAAGCTGTT
AATAATGACTTGGTGACGGCCCTTCAAAAAAGTGTTTTGCTCACAGAAGATAGCCTATGT
GGTGTTTGTGATTCTACTTTTCAAGATCCAGATTGTGTTGTCTATCCGAACCTTGTCACA
GTTCATCCAAAATGTGGAACAAACAAGCATGTGTGTCCAGTCACGGGTAAACTGTTTAAA
GTAGAGAATAAACCACACAATCAATCGAAACAAACTGAATAA
| PANTHER |
Vam6/VPS39/TRAP1 (IPR032914) - T[16-889] 1.4E-146 |
| ProSiteProfiles |
CNH_dom (IPR001180) - T[25-300] 18.199 |
| Pfam |
CNH_dom (IPR001180) - T[33-283] 7.6E-13 |
| ProSiteProfiles |
Clathrin_H-chain/VPS_repeat (IPR000547) - T[606-766] 16.278 |
| Pfam |
VPS39/TGF_beta_rcpt-assoc_2 (IPR019453) - T[781-886] 3.6E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VPS39_HUMAN | 21.734 % | 113 | 1.4E-25 |
| TGFA1_HUMAN | 35.502 % | 494 | 8.48E-162 |
