- Transcript 'Boleac.CG.SB_v3.S13....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S13.g02139.01.t
Possible name(s)
PRDM1; ZFP14; ZNF683
Gene model
Location
S13 [148,004 / 149,999]
Amino acid sequence
Length: 481
>Boleac.CG.SB_v3.S13.g02139.01.p
MGDKIERKKPFFSISDIIKEEKVENTESVLNLSRRSNDKSDFRNESTSDNIKSDSAPIIK
SFGQKTFSAADSGYGSASPSPDCIVGSPLNPNAPPLGLPHPILPERTSPNFPTSLFPAIN
PNLLSEMNQQFLLSTQAALVNKSLHSIRDDLMAKDNKKTANKSRSARFQNMNNITSSIAA
GSNYPKFVPGSMPSYTPYFPPLATWPYFFYGEQYRLMLSLLQNCNNPRNKDTSMGNFPNN
SSAQESTAMHSKKTTXCRPHFGFDSEYSPPFSNSFQSEKSKFNKSGNDTSSSSKMKRGPN
SGYRSLPYPLRKENGKIIYECNVCLKVFGQLSNLKVHLRVHTGERPFSCNECGKGFTQLA
HLQKHHLVHTGEKPYECKSCQKRFSSSSNLKTHSRLHSGEKQFQCKLSSPKSTGQEVVSP
RGMSPITRPGFDHSAALPRTLYQPNIFTHNRLLGSMLDQSLLGFGKSNPMSLLKPRNRND
K
Nucleotide sequence
Length: 1,804
>Boleac.CG.SB_v3.S13.g02139.01.t
ATGGGTGATAAAATTGAAAGAAAGAAGCCGTTTTTTAGCATCAGTGATATTATCAAGGAG
GAAAAGGTGGAGAACACAGAAAGCGTTTTGAATCTATCAAGAAGATCAAATGACAAATCT
GACTTTCGGAATGAAAGTACTTCTGATAATATCAAATCTGATTCGGCGCCAATTATAAAA
TCGTTTGGGCAGAAAACATTTTCTGCTGCGGATAGTGGCTATGGAAGCGCAAGCCCAAGT
CCAGATTGTATAGTCGGATCTCCGTTAAACCCAAATGCTCCTCCATTGGGGCTGCCTCAT
CCGATTTTACCAGAAAGAACTTCTCCAAATTTTCCAACATCGCTTTTCCCCGCCATCAAT
CCAAACCTGCTGTCGGAAATGAACCAACAATTTCTGTTGTCAACGCAAGCCGCGTTAGTC
AACAAAAGCCTACATTCTATTCGAGACGATCTTATGGCGAAAGATAATAAGAAGACAGCC
AACAAGAGTCGCTCTGCAAGATTTCAAAACATGAACAATATTACGTCTTCAATCGCAGCT
GGTTCAAATTACCCAAAGTTTGTTCCAGGCTCAATGCCATCATACACACCGTATTTTCCA
CCTTTGGCAACCTGGCCATACTTTTTCTACGGGGAGCAATATCGTCTCATGTTATCATTG
CTTCAAAACTGCAATAACCCAAGAAATAAAGACACATCGATGGGAAATTTTCCAAATAAC
TCATCAGCTCAGGAATCAACCGCGATGCATTCGAAGAAAACAACANCTTGTCGACCACAT
TTCGGTTTTGATTCGGAATATTCGCCGCCATTTTCAAACTCCTTCCAAAGTGAAAAGTCA
AAATTCAACAAAAGCGGCAACGACACAAGTTCTAGCAGCAAGATGAAGCGCGGACCAAAT
TCTGGATATAGATCTTTGCCATACCCATTGAGAAAAGAAAATGGCAAAATCATATACGAA
TGCAATGTTTGTTTGAAAGTGTTCGGGCAATTATCCAATTTAAAGGTTCATTTGCGCGTC
CACACTGGAGAGCGTCCGTTCAGTTGTAACGAGTGCGGAAAAGGTTTTACACAATTGGCG
CATTTACAGAAACATCATTTGGTTCACACTGGAGAAAAACCCTACGAATGCAAGAGTTGC
CAGAAACGTTTCAGCTCATCAAGTAATCTGAAGACGCACAGCCGACTTCACAGTGGGGAA
AAACAGTTTCAATGTAAACTCTCCTCGCCGAAATCAACCGGGCAAGAAGTGGTCAGTCCA
AGAGGAATGTCGCCGATTACAAGACCTGGATTTGATCACTCCGCTGCACTGCCGAGGACT
TTATATCAGCCTAATATATTCACCCACAATCGTTTATTAGGAAGCATGTTAGATCAGTCT
CTTTTGGGATTTGGCAAATCCAACCCGATGTCGCTTCTAAAACCCAGGAATCGTAATGAC
AAGTAATGTGTTTACCACCAACTTTTATTTGTAGCAACATTTGGCACATTTGGCTTTTCA
TTTTTCGGTCAAACAATTTTGCGTGTAACGTTTTTTAAGATTTCTAGGACTGCGAAATCC
GTTTCGCGATATATAGATATGGCCGATTTGCATTACCAGACTTTATGCTTATTGTTCACG
TACTAAACAGGCTCTCGTTTGAGTTGAGTTCATTCGCTAATGAATTTTTCTGCTTAACAT
TGATCCACTGTGACTTTAACGCCTATGGAAAATGTCACAAATCCTTGGGTTAATGCAATT
CATTTGCTTGTTTCTGTGAATACCACTAAAGGAATAAGACTTTTCCATAATAAACGGAAA
CATT
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[315-365] 7.79E-17 - T[356-407] 1.12E-16 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[319-346] 16.103 - T[347-374] 17.018 - T[375-402] 15.646 |
| SMART |
Znf_C2H2_type (IPR013087) - T[319-341] 0.0017 - T[347-369] 0.0061 - T[375-397] 0.0088 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[321-341] . - T[349-369] . - T[377-397] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRDM1_HUMAN | 76.106 % | 194 | 4.66E-54 |
| ZN683_HUMAN | 57.042 % | 167 | 3.9E-46 |
| ZFP14_HUMAN | 55.914 % | 119 | 5.34E-29 |
