- Transcript 'Phfumi.CG.MTP2014.S8...' >
- Transcript 'Phfumi.CG.MTP2014.S8...' >
- Transcript 'Mooccu.CG.ELv1_2.S71...' >
- Transcript 'Cisavi.CG.ENS81.R97....' >
- Transcript 'Boleac.CG.SB_v3.S135...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S135.g02402.01.t
Possible name(s)
PAX3; PAX5; PAX7
Gene model
Location
S135 [217,365 / 225,250]
Amino acid sequence
Length: 302
>Boleac.CG.SB_v3.S135.g02402.01.p
MMHRPSTFRPAFPLEGQGRVNQLGGVFINGRPLPNHIRHKIVEMAASGVRPCVISRQLRV
SHGCVSKILCRYQETGSIKPGAIGGSKPKVSNAEIESKIEQYKKDNPSMFSWEIREQLIK
LFLYDSKRLSETTKPISIGHRRSFHDCKLIPTRIDYYLQKAILHEQQSPPQSFRPPAATG
QGRVNQLGGVFINGRPLPNHIRHKIVEMAASGVRPCVISRQLRVSHGCVSKILCRYQETG
SIKPGAIGGSKPKVSNAEIESKIEQYKKDNPSMFSWEIREQLIKNMKRFLKEILCVASDA
VT
Nucleotide sequence
Length: 906
>Boleac.CG.SB_v3.S135.g02402.01.t
ATGATGCACAGACCGAGTACATTCCGTCCGGCTTTTCCTCTTGAAGGACAAGGTCGCGTC
AATCAGCTTGGAGGTGTATTTATCAATGGACGTCCACTTCCTAATCACATCCGACACAAA
ATAGTAGAAATGGCTGCTTCTGGAGTTAGACCTTGCGTCATAAGCAGACAACTAAGAGTT
TCACATGGTTGTGTCAGCAAAATTCTCTGTCGATATCAAGAAACTGGTTCCATAAAGCCT
GGTGCAATCGGTGGGAGTAAACCCAAAGTCAGTAATGCAGAAATTGAATCAAAAATTGAG
CAATATAAAAAAGACAATCCGTCCATGTTTAGTTGGGAAATTAGAGAGCAACTCATAAAG
CTGTTTCTTTATGATTCAAAGCGATTATCTGAGACCACTAAACCTATAAGTATTGGTCAC
CGACGAAGTTTTCATGACTGTAAATTGATACCAACACGTATAGACTATTATTTACAAAAG
GCAATATTACACGAGCAGCAAAGCCCACCACAATCATTCCGTCCGCCGGCGGCAACAGGA
CAAGGTCGCGTCAATCAGCTTGGAGGTGTATTTATCAATGGACGTCCACTTCCTAATCAC
ATCCGACACAAAATAGTAGAAATGGCTGCTTCTGGAGTTAGACCTTGCGTCATAAGCAGA
CAACTAAGAGTTTCACATGGTTGTGTCAGCAAAATTCTCTGTCGATATCAAGAAACTGGT
TCCATAAAGCCTGGTGCAATCGGTGGGAGTAAACCCAAAGTCAGTAATGCAGAAATTGAA
TCAAAAATTGAGCAATATAAAAAAGACAATCCGTCCATGTTTAGTTGGGAAATTAGAGAG
CAACTCATAAAGAATATGAAACGATTCTTGAAAGAGATCCTCTGCGTTGCATCAGATGCT
GTTACG
| Pfam |
Paired_dom (IPR001523) - T[16-127] 5.7E-61 - T[180-285] 6.7E-61 |
| SMART |
Paired_dom (IPR001523) - T[16-141] 4.1E-67 - T[180-291] 3.7E-66 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[16-84] 6.3E-39 - T[85-130] 2.9E-16 - T[180-248] 6.3E-39 - T[249-298] 2.4E-16 |
| ProSiteProfiles |
Paired_dom (IPR001523) - T[16-143] 51.124 - T[180-302] 50.221 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[18-123] 1.37E-34 - T[182-285] 2.82E-34 |
| PRINTS |
Paired_dom (IPR001523) - T[20-35] 7.0E-38 - T[38-56] 7.0E-38 - T[58-75] 7.0E-38 - T[76-93] 7.0E-38 |
| ProSitePatterns |
Paired_dom (IPR001523) - T[50-66] . - T[214-230] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PAX5_HUMAN | 70.476 % | 163 | 1.9E-47 |
| PAX7_HUMAN | 77.966 % | 194 | 2.5E-58 |
| PAX3_HUMAN | 76.423 % | 196 | 2.63E-59 |