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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C11.274.v1...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'Boleac.CG.SB_v3.S127...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S127.g01996.01.t

Possible name(s)

RPS3A

Gene model

Boleac.CG.SB_v3.S127.g01996

Location

S127 [128,580 / 132,231]

Sequences

Amino acid sequence

Length: 267

>Boleac.CG.SB_v3.S127.g01996.01.p
MAVGKNKRLTKGGKKGGKKKIVDPFSKKDWYDVKAPAMFKQRQIGKTLVSRTVGTKIASD
GLKGRVFECNQADLHGDESTYRKMRLIVEEVQGKHCLTNFHGMSLTRDKLCSMVKKWQTL
IEANIDLATTDGYKVRLFCIGFTHRRNNQIKKTSYAQHQQIRNIRRKMVDIMTREVTTSD
LREFVNKLIPDSIAKDIEKACQGIYPLHDVHIRKVKILKKPKFDIGRLMELHGEGKGAKS
AANEEGGDTGTKVSRADGFEPPVQETV

Nucleotide sequence

Length: 1,480

>Boleac.CG.SB_v3.S127.g01996.01.t
ATCGGTCAAAGGTCGTGTTAATCAACCACGTCCAAATTGTGAGCGCTGGTCTTCCTTTTC
TAGCTTGTCGCAAAGATGGCTGTGGGCAAGAATAAGCGCCTGACTAAAGGCGGTAAAAAA
GGTGGCAAAAAGAAGATCGTCGACCCGTTCTCCAAAAAGGACTGGTATGATGTGAAAGCC
CCAGCAATGTTCAAGCAACGCCAAATTGGCAAAACGTTAGTCTCAAGAACTGTTGGTACA
AAAATTGCATCAGATGGTTTGAAAGGACGTGTCTTCGAGTGCAATCAGGCTGATCTTCAT
GGAGATGAATCGACCTATAGGAAGATGAGATTGATCGTCGAGGAAGTTCAAGGAAAGCAC
TGTCTGACAAACTTCCATGGCATGAGTCTCACAAGGGACAAGCTTTGCTCAATGGTTAAA
AAATGGCAAACNTTGATTGAAGCCAATATTGATCTTGCAACCACGGATGGATACAAAGTC
CGTTTGTTTTGCATCGGTTTCACCCACAGAAGAAACAACCAGATCAAGAAAACCTCCTAT
GCTCAACATCAGCAGATTCGTAACATCAGGAGAAAAATGGTCGATATCATGACCCGTGAA
GTGACAACTTCTGATCTACGGGAGTTTGTGAACAAACTGATCCCTGATTCGATTGCCAAG
GACATCGAAAAGGCTTGCCAAGGCATTTATCCATTGCATGATGTCCACATTAGGAAGGTC
AAGATTCTGAAAAAGCCCAAATTTGACATTGGCCGTTTGATGGAACTTCATGGCGAAGGC
AAGGGCGCCAAGTCTGCTGCTAACGAGGAGGGAGGCGATACCGGGACCAAGGTCAGCAGA
GCTGATGGTTTCGAGCCACCTGTTCAAGAAACCGTCTGAGTAAAATAAATAAATCACTTA
TGATTGACCTCCTTGATTTGATGGTTCGTGTGGAATGCTTGAGATTTCTCTGACAGATTA
ACGTTCTCATAAGCCTGTAATGGAGACTGGTGCGATCGGTTTTCTCGCAGCTCCTGTTAC
CGGCTTCAAGGGCCTAGCTTTTCCAAAGGTTTCGGTGCAGTTGCGCTCTGATGGAGCTGA
TAGAAATTTGACCCAGCCCTAGTACCTAGATTTGTGTTTTGTTGACTTCACGCAAGATTA
GCCAGCTACTGCAGCAGGTAGGCATANATAGACAACACTAGTTGCGTGTAGTTCCTTCTG
GGAACTCTTGATCTGGCTGCGGGTCTTACTCTCATCGGTAGCCTACCCCATTTAGAAATG
ATCGTCGGATCAACTGTGAAGCATAGTGCGATATAGGCCTACGATATTNGGCTACATATT
GCTCGTTTGATAGCTTCTGTACCAGACAAGATAACCACGCTAAAAGTGCACTTGCGCTGT
GTGTACGATTTGCCAACTTGCATGCCATTGCGCGGGCTTCATCAGTTTAGTTTAGAATCA
CGTTTAAATTGGTAATACCACATGCATGCAAAAATTACTG

InterProScan

Hamap
Ribosomal_S1/3_euk (IPR027500) - T[1-267] 40.813
Pfam
Ribosomal_S3Ae (IPR001593) - T[16-221] 3.5E-99
SMART
Ribosomal_S3Ae (IPR001593) - T[16-221] 2.3E-139

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS3A_HUMAN 75.655 % 411 5.48E-147