- Transcript 'KH2012:KH.C5.202.v1....' >
- Region 'REG00000362' >
- Molecular Tool 'Mesp>CaveolinP189L' >
- Transcript 'Boleac.CG.SB_v3.S127...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S1276.g02028.01.t
Possible name(s)
ACTN1; ACTN2; ACTN3
Gene model
Location
S1276 [2,965 / 10,492]
Amino acid sequence
Length: 610
>Boleac.CG.SB_v3.S1276.g02028.01.p
MXYNILLQFQTFTAWCNSHLRKAGTQIEDIEQDFRNGLKLMLLLEVISGEHLPKPDRGKM
RFHKIANVNKALDFIEAKGVRLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEESS
AKEGLLLWCQRKTAPYRNVNVQNFHMSWKDGLAFCALIHRHRPDLIDYDKLRKDDPITNL
NTAFDVAEKYLDIPKMLDAEDFAGARPDEKAVMTYVSCYYHAFSGAQKCVKFHVNCSDSS
YLSYHSFIDIVNMAKPDERSIMTYVAAFYHAFSGNDQTETAANRICKVLHVNQENERLMD
EYERLASDLLEWINRMKPWLEDRATDNTMNGVQKKLDDFRDYRRHQKPPKAEEKGQLEAA
YNTLQTKLRLSNRPAFMPSEGKLVSDIANAWKGLEGAEKGYEEWLLSEMRRLERLDHLAK
KFYHKAQIHESWTEGKEEKLAEEDYKQCQLQEIKALIKKHDAFETDLAAHQDRVEQIAAI
AQELNDLEYHDAATINQRCGTICEEWDRLGDATGKRREALHNVEKCMEAIEQLHLEFAKR
AAPFNIWMDGATEDLEDMFIVHSTEEIKVMLLESTKPRHRREQSGASSQHMSNSKLLSVM
PSKKRTSLCH
Nucleotide sequence
Length: 1,833
>Boleac.CG.SB_v3.S1276.g02028.01.t
ATGGNTTATAACATTCTCTTGCAATTCCAGACATTTACAGCATGGTGCAACTCACATCTC
AGAAAAGCTGGTACACAAATCGAAGATATTGAGCAGGATTTTCGAAATGGATTGAAGTTG
ATGCTTTTATTGGAGGTTATATCAGGAGAGCATCTGCCAAAACCTGATCGTGGTAAAATG
AGGTTTCACAAGATTGCAAATGTCAACAAAGCTTTAGATTTCATTGAAGCCAAAGGAGTA
AGGCTTGTTTCTATTGGAGCTGAAGAAATTGTGGATGGAAATGCAAAGATGACACTTGGT
ATGATCTGGACGATTATCCTCAGATTTGCCATTCAAGATATCTCTGTGGAAGAATCATCT
GCCAAAGAGGGTCTTCTACTATGGTGTCAACGAAAAACAGCTCCGTACAGGAATGTCAAC
GTTCAAAATTTCCATATGAGTTGGAAAGATGGACTTGCGTTCTGTGCTTTGATTCACCGA
CACCGACCTGATCTTATTGATTATGACAAATTGAGGAAGGACGATCCCATCACCAATCTG
AACACTGCTTTCGATGTGGCAGAGAAATATTTGGACATCCCAAAAATGTTGGACGCTGAA
GATTTTGCTGGCGCGAGGCCAGATGAGAAAGCTGTTATGACATATGTGTCATGCTATTAC
CATGCGTTTTCTGGGGCTCAAAAGTGTGTGAAATTTCATGTGAACTGTTCTGATTCTTCA
TATCTGTCTTATCATTCATTCATAGACATTGTGAACATGGCTAAGCCTGATGAACGGTCT
ATCATGACCTACGTGGCTGCTTTCTATCATGCTTTCTCTGGCAATGATCAGACTGAAACT
GCTGCCAACCGTATTTGCAAAGTACTCCACGTCAACCAAGAAAATGAAAGACTCATGGAT
GAATATGAAAGGCTCGCCTCGGATCTATTGGAATGGATAAATCGCATGAAGCCATGGCTG
GAGGATAGAGCTACTGATAACACAATGAATGGTGTTCAGAAGAAACTCGATGACTTCAGA
GATTATAGAAGACACCAAAAGCCACCTAAGGCTGAAGAGAAAGGTCAACTTGAAGCTGCT
TACAACACTCTTCAAACTAAGTTGAGATTGAGCAATAGACCAGCTTTCATGCCATCNGAA
GGAAAATTGGTGTCTGATATTGCAAATGCTTGGAAGGGTCTNGAAGGTGCTGAAAAAGGC
TACGAAGAGTGGCTTCTATCTGAAATGAGAAGGTTAGAACGTTTGGACCATTTGGCCAAG
AAATTCTACCACAAGGCACAGATTCACGAGTCATGGACTGAAGGAAAAGAGGAGAAACTG
GCTGAAGAAGACTATAAGCAATGTCAGCTGCAAGAGATTAAGGCTTTGATTAAGAAGCAT
GATGCTTTTGAAACCGACCTTGCAGCTCATCAAGATCGGGTGGAGCAAATTGCTGCTATT
GCACAAGAATTGAATGATTTGGAATATCATGATGCTGCAACTATAAATCAACGTTGTGGT
ACTATATGTGAGGAATGGGATCGCCTTGGTGATGCNACTGGAAAGCGAAGAGAAGCGCTG
CATAATGTTGAAAAATGCATGGAAGCTATCGAACAGCTTCATCTTGAATTCGCAAAACGA
GCAGCNCCTTTCAACATATGGATGGATGGTGCTACCGAAGATTTGGAAGACATGTTTATT
GTACATTCAACGGAAGAAATCAAGGTGATGCTTTTGGAAAGCACAAAACCGCGTCATCGT
CGAGAACAATCGGGGGCCTCATCTCAGCACATGAGCAATTCAAAGCTACTCTCAGTGATG
CCGAGCAAGAAAAGAACATCATTATGTCATTGA
| Gene3D |
CH_dom_sf (IPR036872) - T[5-114] 9.0E-42 - T[115-230] 3.2E-50 - T[242-282] 1.3E-6 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[6-110] 16.862 - T[119-221] 15.38 |
| SMART |
CH-domain (IPR001715) - T[8-108] 7.4E-22 - T[121-219] 1.3E-23 |
| ProSitePatterns |
Actinin_actin-bd_CS (IPR001589) - T[8-17] . - T[82-106] . |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[9-223] 4.59E-82 |
| CDD |
CH-domain (IPR001715) - T[10-110] 3.62388E-22 - T[120-223] 3.57051E-27 |
| Pfam |
CH-domain (IPR001715) - T[10-110] 2.9E-23 - T[120-224] 1.2E-26 |
| Pfam |
Spectrin_repeat (IPR002017) - T[298-406] 7.0E-13 - T[418-521] 1.7E-22 |
| SMART |
Spectrin/alpha-actinin (IPR018159) - T[300-406] 0.55 - T[420-521] 5.1E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTN2_HUMAN | 70.567 % | 830 | 0 |
| ACTN3_HUMAN | 67.925 % | 824 | 0 |
| ACTN1_HUMAN | 67.002 % | 819 | 0 |