- Transcript 'Boleac.CG.SB_v3.S123...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S123.g01802.01.t
Possible name(s)
PAX2; PAX5; PAX6
Gene model
Location
S123 [67,165 / 68,233]
Amino acid sequence
Length: 126
>Boleac.CG.SB_v3.S123.g01802.01.p
ACEVSGHSGVNQLGGMFVNGRPLPEATRQKIVHMAHRGARPCDISRALQVSNGCVSKILA
RYYETGTIQPRAIGGSKPRVATPEVVSMISHYKRESPSIFAWEIRDRLINENVCNVDNIP
SVSTSK
Nucleotide sequence
Length: 381
>Boleac.CG.SB_v3.S123.g01802.01.t
GCATGTGAAGTGTCCGGTCACAGTGGCGTGAATCAGCTAGGAGGGATGTTTGTGAACGGA
CGGCCACTCCCGGAAGCTACCAGACAAAAAATTGTTCATATGGCTCATCGCGGTGCCAGG
CCTTGTGACATTTCGAGAGCACTCCAAGTATCGAACGGGTGTGTCAGCAAAATTTTAGCC
AGGTACTATGAGACCGGTACTATTCAACCCAGAGCGATTGGGGGGAGTAAGCCGAGGGTG
GCAACACCTGAAGTAGTGTCCATGATATCACATTACAAAAGAGAAAGTCCAAGTATCTTT
GCCTGGGAGATAAGAGATCGTCTCATAAATGAAAACGTATGCAACGTAGATAACATCCCC
AGTGTGAGTACATCGAAATGA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[2-74] 1.5E-40 - T[75-123] 9.6E-27 |
| Pfam |
Paired_dom (IPR001523) - T[6-124] 1.8E-63 |
| ProSiteProfiles |
Paired_dom (IPR001523) - T[6-126] 56.749 |
| SMART |
Paired_dom (IPR001523) - T[6-126] 2.5E-76 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[8-123] 2.99E-35 |
| PRINTS |
Paired_dom (IPR001523) - T[10-25] 7.7E-42 - T[28-46] 7.7E-42 - T[48-65] 7.7E-42 - T[66-83] 7.7E-42 |
| ProSitePatterns |
Paired_dom (IPR001523) - T[40-56] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PAX5_HUMAN | 69.167 % | 188 | 8.14E-60 |
| PAX2_HUMAN | 68.908 % | 186 | 5.87E-59 |
| PAX6_HUMAN | 83.051 % | 210 | 3.55E-68 |