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- Transcript 'Boleac.CG.SB_v3.S113...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S113.g01236.01.t
Possible name(s)
KDM8; LRWD1; TYW5
Gene model
Location
S113 [270,412 / 273,019]
Amino acid sequence
Length: 764
>Boleac.CG.SB_v3.S113.g01236.01.p
METHITAPSPSKIRRKSCSEATPPALQAHSFMQIHDSDNNSENFAVQIWCCKFKPESSDI
VATCGGETVCIIDANGAKVKSKFFKQGEEFYTLDWAQVSSEKFDSNILACGGVLGTVYLI
HAEQFCVYGYFRAHAKPVQTLCFIPGNPSKLLTAGNEKKICLWDIGELSLPDYNFCSRKL
AVFEGFHFSPLKMLTLQQHYLFCATEGGLLCWYVQDGFTMNDNTKIKKFSTPSEVQFLFV
EDEPVIDGLEIIRDDLMATKCAQSGVIFLWKPSSLFEKVRQGKSSVKADLVDELKWSNTE
QLYLNIAVADNRYLFAGDENGCIWIYDCNCGSVQRNNNTKNKAYRYIPGKPRPALEIVNW
PICEREDQTVVDAICTGSMMNNITCGYGLRYLVAATDNNLICIYKIAFFIPVAFDIVRLH
MDFYEPIKVKRKRNLDVEEFEKDFLVPQCPVIIEDHLSDLPQSKWSIDYLLERVSDNKIN
VRGRTNQEDYRVGKNYILRTTTFGEYVTDMKKANARGASSYMAVQNISKVFPEIASECRM
PKYVKKIHNGPFLWIAYSGHYEFCHFDSSEGMLMMISGIKRIKLFRSSDLDYLYPNPLGS
KGKTIQSQVDCENPDTMKHPNFLKAQCYSCVLSEGEMLYIPAFWWHQVTSETEAVSVNVF
FGDEGSNSFISRHLISPSWPAFKYWLLNVIEQNRPHDSFARTLERLSLCVENFLLKQFHE
IATPEQLNFLLQTIMDHVGVKKLPEFTHGGKHPPMLKIRGLRWR
Nucleotide sequence
Length: 2,295
>Boleac.CG.SB_v3.S113.g01236.01.t
ATGGAAACTCACATCACTGCACCATCTCCTTCAAAAATCAGAAGAAAGTCCTGTTCAGAA
GCAACTCCGCCAGCTCTTCAGGCTCATTCTTTCATGCAGATTCATGATTCAGATAACAAT
TCAGAGAACTTTGCTGTACAGATTTGGTGCTGCAAGTTCAAGCCTGAATCATCGGATATA
GTTGCTACATGCGGGGGAGAGACTGTTTGCATCATTGATGCCAATGGCGCTAAAGTCAAA
TCTAAGTTCTTCAAGCAGGGTGAGGAGTTCTACACATTAGATTGGGCACAAGTTAGTTCA
GAAAAGTTTGACTCAAACATCCTGGCGTGTGGTGGTGTTCTTGGTACTGTATATTTGATA
CATGCTGAACAGTTCTGTGTGTATGGATATTTCCGTGCCCATGCAAAACCTGTTCAAACT
CTATGTTTCATTCCTGGAAATCCTTCAAAGCTATTGACTGCTGGAAATGAGAAAAAGATC
TGCCTGTGGGATATTGGAGAGTTGTCTCTTCCTGATTATAATTTCTGTAGTAGAAAACTT
GCAGTGTTTGAAGGATTTCATTTTAGCCCTCTGAAAATGCTAACTCTTCAGCAACATTAT
CTGTTCTGTGCGACTGAAGGTGGATTATTGTGCTGGTATGTTCAAGACGGCTTTACCATG
AACGACAACACAAAAATTAAAAAGTTTTCAACACCATCTGAGGTTCAATTTCTATTCGTC
GAAGATGAACCAGTCATCGATGGCTTGGAAATTATTCGTGATGATCTCATGGCTACAAAA
TGTGCCCAAAGTGGAGTCATATTCTTATGGAAACCAAGTAGTCTATTTGAAAAAGTAAGA
CAAGGAAAATCGTCAGTTAAAGCTGACCTGGTCGATGAGTTGAAATGGTCCAATACGGAG
CAACTCTATTTGAATATTGCAGTAGCTGATAACAGATATCTATTTGCTGGTGATGAAAAT
GGCTGCATATGGATTTATGACTGTAACTGTGGCTCAGTTCAACGTAACAATAATACCAAA
AACAAGGCATATCGATATATTCCTGGTAAACCAAGGCCTGCGTTGGAAATTGTAAATTGG
CCAATATGTGAGCGGGAGGATCAAACAGTTGTGGATGCTATATGCACTGGAAGCATGATG
AATAATATTACATGTGGATATGGCTTGCGATATTTGGTTGCTGCCACTGATAACAATTTA
ATATGCATTTACAAAATCGCTTTTTTTATCCCTGTTGCCTTTGATATTGTACGATTACAT
ATGGATTTCTATGAACCCATCAAGGTGAAACGCAAAAGAAATCTTGATGTTGAAGAATTT
GAAAAAGATTTCCTTGTGCCACAATGTCCGGTTATTATTGAGGATCACCTGAGCGACTTG
CCTCAATCAAAATGGAGTATTGACTATCTACTTGAGAGAGTCTCTGACAACAAAATCAAT
GTAAGGGGAAGAACGAATCAAGAAGATTACAGAGTTGGAAAAAATTACATCCTGAGAACG
ACAACATTTGGAGAATACGTAACTGATATGAAGAAAGCTAACGCTAGAGGCGCCAGCTCG
TATATGGCGGTACAGAATATCAGCAAGGTATTCCCAGAGATTGCATCTGAATGCAGGATG
CCAAAGTACGTGAAGAAAATCCATAACGGGCCATTTTTATGGATTGCTTATAGTGGTCAT
TATGAATTCTGCCATTTTGACTCTAGTGAAGGGATGTTAATGATGATAAGTGGGATCAAA
AGGATAAAATTATTTAGAAGTTCAGATTTAGACTATTTATATCCCAACCCACTTGGCTCT
AAAGGTAAAACTATCCAATCTCAAGTAGACTGTGAAAACCCAGACACTATGAAACATCCA
AACTTTCTCAAAGCTCAATGCTATTCTTGTGTTCTTAGTGAAGGCGAAATGTTATATATT
CCAGCGTTTTGGTGGCACCAGGTAACGTCAGAGACAGAGGCCGTCTCAGTAAATGTATTT
TTTGGCGATGAAGGCTCAAACTCTTTCATTTCAAGGCACTTAATTTCTCCATCGTGGCCT
GCTTTTAAATACTGGTTGTTAAATGTCATTGAACAAAATCGACCGCATGATTCATTCGCA
CGAACTCTAGAGCGATTGTCTTTGTGTGTGGAGAATTTCTTATTGAAACAATTTCACGAA
ATTGCAACTCCGGAACAGCTCAACTTTTTGCTTCAAACAATCATGGACCACGTAGGGGTC
AAAAAGTTACCCGAGTTCACCCATGGCGGTAAGCATCCACCGATGTTGAAAATCAGAGGC
TTGAGGTGGAGATGA
| SMART |
WD40_repeat (IPR001680) - T[27-73] 68.0 - T[124-164] 3.8E-4 - T[287-327] 170.0 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[47-330] 2.93E-26 - T[377-406] 2.93E-26 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[131-173] 8.65 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[131-165] 9.305 |
| SMART |
JmjC_dom (IPR003347) - T[520-676] 2.0E-5 |
| ProSiteProfiles |
JmjC_dom (IPR003347) - T[520-691] 20.67 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRWD1_HUMAN | 30.296 % | 186 | 3.8E-50 |
| KDM8_HUMAN | 27.917 % | 92 | 1.23E-19 |
| TYW5_HUMAN | 28.287 % | 103 | 3.06E-24 |