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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S9...' > 
  2. Clone 'cilv001m07' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'Boleac.CG.SB_v3.S23....' > 
  5. Transcript 'Boleac.CG.SB_v3.S113...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S113.g01218.01.t

Possible name(s)

CNNM1; CNNM2; CNNM4

Gene model

Boleac.CG.SB_v3.S113.g01218

Location

S113 [94,263 / 95,517]

Sequences

Amino acid sequence

Length: 417

>Boleac.CG.SB_v3.S113.g01218.01.p
MGLGAQNVSCFFEGEELICNGTIYVKKENPLDYHDEWFWIYLGIYVGLVLVAGLVSGLTM
GLLSLDMMSLNVLASGGKPHERKYAAKIIPIIKRHHLLLVTLLLTNAAAVESMPLFLDRI
SDPVTAIAVSVTAVLIFGEVVPQAICTRYGLAIGAHLSPLVIFLMFITLPISWPLSKLLD
CILGTEHGTFFRRAELSVLVDLHQQNDHENEEPLSKDEAMIIKGALSMRDKRVRDICTPL
SKVYSLDITGVMDERTMEEILNTGHSRIPVHEQDKSNLLGILLVKKLIKLDPEDSIPIHS
IFENDGRDLPSIQEDVQLFDLLNQFQNGRSHMCKVVDTSQNYGEVIGIITLEDVIEELIQ
EEILDETDLDVMQRLQIAKVKSVRRKLLSSRDRSYPSSPQHTYDATSDSDSHPLLAS

Nucleotide sequence

Length: 1,254

>Boleac.CG.SB_v3.S113.g01218.01.t
ATGGGTCTAGGAGCACAAAACGTCAGTTGCTTCTTTGAAGGCGAAGAACTGATATGCAAT
GGGACTATCTACGTCAAAAAAGAAAACCCGTTGGACTACCATGACGAATGGTTCTGGATA
TACTTGGGCATTTATGTTGGATTAGTATTAGTTGCCGGCCTAGTGAGTGGTTTAACGATG
GGCCTTTTGTCGCTTGATATGATGAGTTTGAATGTGTTGGCTTCTGGAGGTAAACCTCAT
GAGCGAAAATATGCTGCCAAAATTATACCAATCATAAAGCGTCACCATCTGCTATTGGTG
ACTTTGCTCCTTACGAACGCTGCAGCAGTTGAAAGTATGCCTTTGTTCTTGGATAGAATA
TCCGACCCTGTTACTGCGATTGCAGTTTCCGTAACTGCAGTTCTAATTTTTGGGGAGGTT
GTTCCTCAAGCCATATGCACAAGATACGGTCTTGCTATCGGAGCACATCTATCTCCATTG
GTAATATTTTTGATGTTCATCACTCTCCCTATATCATGGCCCTTATCAAAACTGCTGGAT
TGCATATTGGGAACTGAGCATGGGACATTTTTCCGTCGTGCCGAGTTGAGTGTGCTNGTG
GACCTACACCAACAAAATGATCATGAGAATGAAGAACCTTTATCCAAAGATGAGGCAATG
ATTATAAAAGGTGCTTTATCGATGAGAGACAAAAGAGTGCGNGATATCTGCACTCCNCTC
AGTAAAGTCTATTCATTAGATATAACAGGGGTTATGGATGAACGCACCATGGAAGAAATA
CTGAACACTGGTCATTCAAGGATTCCTGTTCATGAGCAGGACAAGTCAAACCTGCTTGGT
ATTTTATTGGTCAAGAAGTTGATCAAACTTGATCCAGAAGATAGTATTCCAATACACTCA
ATTTTTGAAAATGATGGGCGCGATTTGCCATCGATACAAGAAGACGTCCAACTTTTTGAC
CTACTGAATCAATTTCAAAATGGCCGAAGTCACATGTGCAAGGTTGTCGATACATCACAA
AACTATGGAGAAGTCATTGGCATCATTACACTAGAAGATGTNATTGAAGAACTTATACAG
GAAGAGATATTGGACGAAACAGACTTAGATGTGATGCAAAGACTTCAAATAGCAAAGGTC
AAGTCTGTGAGAAGGAAGCTGTTGTCATCACGTGACAGGAGCTATCCGTCCAGTCCNCAG
CATACNTATGATGCCACATCAGATTCCGATTCCCATCCCTTACTGGCTTCATAA

InterProScan

Pfam
DUF21 (IPR002550) - T[44-209] 5.4E-33
ProSiteProfiles
CBS_dom (IPR000644) - T[237-298] 7.346 - T[305-366] 10.778
SMART
CBS_dom (IPR000644) - T[247-292] 100.0 - T[308-359] 6.1E-4
Pfam
CBS_dom (IPR000644) - T[307-358] 4.7E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CNNM2_HUMAN 40.616 % 254 1.11E-76
CNNM4_HUMAN 36.869 % 237 7.21E-71
CNNM1_HUMAN 35.362 % 157 9.46E-42