- Transcript 'KH2012:KH.L149.2.v5....' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Cisavi.CG.ENS81.R14....' >
- Transcript 'Boleac.CG.SB_v3.S112...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S112.g01140.01.t
Possible name(s)
ARIH1; RNF144A; RNF144B
Gene model
Location
S112 [21,572 / 27,605]
Amino acid sequence
Length: 409
>Boleac.CG.SB_v3.S112.g01140.01.p
MAEYHTVINIENDEESTQLMPQEESSNPCKLCLEEIQPGKKFYLKACGCFFCLECMTTYV
KLLVDDGVALNISCPDADCVVQGRLQLDEVSSLIHEATLERYLQLRQEQEVAVNPLSTFC
PTPDCSNICAVPEAKSHSMLKRMKNLGKKLPAIPLKVYCSKVGLYEFLLPHLQSKREFLM
IDTFLRLKFHEFFSFPQWSNKHKCQEQEFQAGNNEILSKRRALMASNRTDALIKRCPVCN
ILIEKDRGCGQMICKNCNHVFCWHCLKLLDNDFMLRHYDKGPCKNFLGHTRSQVFRHRLG
VIGLFAAFCLLVLTIAPILLLAAPIFLCCKWKDCCERAWQRAQFENNNALFAELQPTQTH
QSTVETVPVVMRQESQISTAMLLPNQVPDEHSTSIFIENHPTTSSTTTV
Nucleotide sequence
Length: 2,592
>Boleac.CG.SB_v3.S112.g01140.01.t
AGAACTATACCCACGGTACGTTTCAAGATGTAGAAAATGTAGGCTATCGTGTCAAAGGTA
ATGCCTTGGAATATGTAATAAGAGACGCTATGCAGGATGGCTGAATATCACACTGTTATC
AACATCGAAAATGACGAGGAGTCGACACAATTAATGCCTCAAGAAGAGAGCTCAAATCCT
TGCAAACTATGTCTGGAAGAGATCCAACCCGGGAAGAAATTTTACCTAAAAGCATGCGGA
TGTTTTTTCTGCCTAGAGTGCATGACAACCTACGTCAAGCTGCTGGTCGATGACGGAGTG
GCGTTGAATATTTCATGTCCTGATGCAGATTGTGTTGTGCAAGGCCGCCTTCAACTCGAT
GAGGTCAGCAGTCTGATTCATGAAGCGACGTTAGAACGCTACCTTCAGCTACGACAAGAA
CAAGAAGTGGCAGTTAACCCTCTAAGCACATTCTGCCCAACTCCAGACTGTTCAAATATC
TGTGCTGTACCGGAGGCCAAGTCACACTCGATGTTGAAGAGGATGAAAAATCTCGGCAAA
AAGTTACCGGCCATACCGTTGAAAGTGTACTGTTCGAAGGTCGGCTTGTACGAATTCCTT
CTGCCACATTTGCAAAGCAAGCGTGAGTTTCTAATGATAGATACTTTTCTGCGATTGAAA
TTCCATGAATTTTTTTCATTTCCTCAGTGGTCAAATAAACACAAATGTCAGGAACAAGAA
TTCCAAGCTGGAAATAATGAGATCTTATCAAAGAGGAGAGCTTTGATGGCTAGCAATCGA
ACAGATGCCCTCATCAAACGATGCCCTGTTTGCAATATTCTGATCGAGAAAGATCGAGGG
TGCGGTCAGATGATTTGTAAAAACTGCAATCATGTCTTCTGCTGGCATTGTTTGAAACTT
CTAGACAATGACTTCATGTTGCGACATTATGACAAAGGTCCTTGTAAGAATTTCCTTGGA
CACACGAGGTCTCAAGTCTTCCGTCATCGACTTGGGGTTATTGGACTGTTTGCTGCATTT
TGCCTCCTGGTTCTTACCATTGCACCAATATTACTACTTGCTGCTCCGATATTCCTCTGT
TGTAAGTGGAAAGACTGCTGCGAACGGGCGTGGCAAAGAGCTCAATTTGAGAATAATAAC
GCTCTATTTGCTGAGCTTCAACCAACACAGACGCACCAATCTACTGTGGAAACTGTCCCT
GTTGTTATGAGGCAAGAAAGCCAAATCTCTACTGCCATGCTATTGCCAAATCAGGTTCCT
GACGAACACAGCACTTCCATATTTATCGAAAATCATCCTACAACAAGCTCGACAACGACA
GTCTGACTTCTCCAATCGGTATCCTTATTCCATGAAAACCTGCCAACCTGTCTTGAGTGT
CTTTTTTTGCATAGCCTACCTGAATACTATACGGCCGCGGGCGCAGCGACAACTGTGGAG
TGGATACTACTTGGACTACAGAAACACTATAATTCCACCCGGTCTGAATCGGTGACGGCT
CTAGAGCGGCGTTCTGGGGGCCAGGCTGAATTTCCGCTTTGAACTACCATTTTTCCCCGT
CAAAGGGTGCTTCCTAAAAAAAGGTCGTCACCCTGGCTGCAGTCGCCGGAACCATTTTTC
AACTTTACGCCGTGTATTAATACTTTTGACGATCAAAGACCGGCGGTCTGGTAACCTAGA
CGAGATCTTTGGCGTTTGGAAAGCTCCCACCTTCGCCCCCCTCTACAATCCACCCCCTGA
CCTAAAGTGATGCGGGATGCCTATGTGTAACTGTCCTCTTAATGGCGTTGGACTGTCCCC
ACACCGCAGCCTTCCCTCACTGCGTGAAATCTCTACTGAGTGCGTGTAGCGTATTCGTCC
ACAGCAGCAAGCTTTCTGGAAGAGGTGAGGTTTGTTTGAAGTCGTTGATCCGAGAATACG
TCAAGGCCGCAAGCAGTTTTGTCTGTATACCTTGTACCTATCCGGAATTATCGGTGCGTT
TTATGATTTAAGCGGTATATGGAAGTTACTATGTTGGACTTTTACGGGGAAGTGGATGTC
TCTTTTCGCCCTTATTGCCGCATACGTGGCGGGTAACTTTTGAATTCTGATCTCTGTTGC
CCCATTCTGGACGTTATTGATGTTTTTCTGGCTGAGTATTTTTCCTTGGAAGGCACACTC
TACTGTTGTTTTATCTAACCTCTGTAAATTTCTATTTCACAAAGCTACCTTGTGTAATTT
TTATCTCGATCTCTGATTTTAACGGTTATACCGGACTGGTTTAACCTCGCTTTGGTTGCA
ATTTTGCCGCGAAGACGTCGTTCCGTTTCGTCTCGGCACCGAAAATATGTTTAGAACAGC
CATCTCACCGACAGGGGGAGTAAAGTAGAATTTCTGACTGGAGTTTCCGCAGTTATTGCT
CATGTAACTTTGCACTTGTACTTTGTGAATTGATTCCTGTTCTTTCCGTTATTGTTATTA
ACACTACTCCTCTCTAAAGGAAGTCGTTCGAATCGACCGACGTATAGCCTATGTTAGTCG
TCTGGGCAATGTGGGCATGCATGATTCACAAATATATCGAATTTTTCGCGCCTTGGCGGA
ATCCTGAATACA
| PANTHER |
E3_UB_ligase_RBR (IPR031127) - T[22-162] 1.3E-73 - T[197-329] 1.3E-73 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[23-115] 1.5E-18 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[29-75] 9.288 |
| SMART |
IBR_dom (IPR002867) - T[100-283] 6.7E-5 |
| Pfam |
IBR_dom (IPR002867) - T[228-268] 1.9E-8 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[257-266] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| R144A_HUMAN | 37.785 % | 205 | 2.48E-63 |
| R144B_HUMAN | 34.967 % | 191 | 5.04E-58 |