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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S10....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S10.g00315.01.t

Possible name(s)

DMBX1; DRGX; OTX1

Gene model

Boleac.CG.SB_v3.S10.g00315

Location

S10 [192,216 / 193,540]

Sequences

Amino acid sequence

Length: 113

>Boleac.CG.SB_v3.S10.g00315.01.p
MGQLSPELYAQIACHYPHLQPTYREQVLSLEKFAGAYFESRFGLRAHKQRRSRTAFTTDQ
LKALEAVFKETQYPDVLTRERLAVYTNLPEARVQVCDGSCVRKSISSTFTVSC

Nucleotide sequence

Length: 723

>Boleac.CG.SB_v3.S10.g00315.01.t
ATGGGCCAGCTTTCTCCGGAGTTGTATGCTCAAATTGCATGTCATTATCCTCATCTGCAA
CCGACCTATCGAGAGCAAGTGCTGTCACTTGAAAAATTTGCGGGTGCGTATTTTGAATCG
CGATTTGGACTCCGCGCGCACAAGCAAAGGAGAAGCAGAACAGCATTCACTACAGATCAG
CTCAAAGCCCTCGAAGCTGTATTCAAAGAAACTCAGTACCCTGATGTGCTGACTCGTGAA
CGATTGGCTGTTTATACCAATTTACCAGAAGCTAGAGTGCAGGTTTGCGACGGTTCTTGT
GTACGTAAATCGATAAGCAGCACGTTCACTGTTTCCTGTTGACTCCAGGTTTGGTTCAAG
AACAGGAGGGCGAAATTTCGTAAACAGCAGCGACTTGGTACGCATACTGTGTCAAGCGTA
AAGAACACTGACAACAAAAGCGAGGAACTGTCAGAGGACAAAAAGCATTACGAAGTCGAT
GAAAAACCCATAAGCGATCAACAACGATTGGAACAAGCAAATGATAACGCGAACAAAAAT
GTTGCGGATGATCTAAAAGAATTGAGAAATAACGTATTTTCGGTCAGCGACATACTACAG
GGTTGCAGCAGCAGTTCGAGTGTTTCCCATTTCGCAACATCTCCATTTCTGTGGAATCAA
ACGCATCGACTTTCAGCACAAATGATGGCCATGTCTAATGGATTGCTACCATTATCTTGC
ACT

InterProScan

SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[46-95] 1.28E-15
ProSiteProfiles
Homeobox_dom (IPR001356) - T[47-95] 11.305
SMART
Homeobox_dom (IPR001356) - T[49-103] 8.9E-9
Pfam
Homeobox_dom (IPR001356) - T[50-95] 1.4E-13
CDD
Homeobox_dom (IPR001356) - T[50-95] 4.10931E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DMBX1_HUMAN 57.831 % 87.8 9.23E-22