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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S109...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S1094.g00935.01.t

Possible name(s)

NPTX1; NPTX2; NPTXR

Location

S1094 [8,892 / 10,609]

Sequences

Amino acid sequence

Length: 213

>Boleac.CG.SB_v3.S1094.g00935.01.p
MKKFVLPDARSFRDRKKHIGGRNWGMCPLGACVKGDGPYFLVNHLVVRMRCEILQVIKDA
VYLPTAEDDGSRRTSVKKSTASVTSSIPRAWITGDIIDQGQRAMTVCSWVKSLDQSGTGT
VFVYVTKKERVEFGLVGISKESSKDSEEPHDLFVVFKGKKSDPIKLGLDDVRWHHICTTW
SSRYGVWKVYKDGILVSQGKQMKVLSVETNQAY

Nucleotide sequence

Length: 642

>Boleac.CG.SB_v3.S1094.g00935.01.t
ATGAAGAAGTTTGTGTTGCCAGACGCCCGGAGTTTCAGGGACAGAAAAAAGCATATAGGT
GGTAGAAACTGGGGAATGTGCCCGTTGGGCGCATGCGTGAAGGGCGACGGACCTTATTTT
TTAGTTAACCACCTCGTTGTTCGGATGAGATGTGAAATACTTCAAGTTATAAAAGACGCC
GTGTACCTCCCGACGGCAGAGGATGATGGATCGAGACGGACATCTGTAAAGAAATCCACA
GCGAGTGTCACATCATCCATTCCAAGAGCATGGATAACTGGAGATATAATTGATCAAGGC
CAACGCGCTATGACTGTATGCTCATGGGTCAAATCGCTGGATCAAAGCGGAACAGGAACA
GTATTTGTTTACGTCACAAAGAAGGAAAGAGTCGAATTTGGTTTGGTCGGGATTTCAAAA
GAGTCGTCAAAAGATTCAGAGGAACCTCACGACCTTTTTGTGGTCTTCAAAGGAAAGAAA
TCAGACCCAATTAAACTTGGCCTTGATGACGTCAGATGGCATCATATCTGCACCACGTGG
TCATCCAGATATGGAGTATGGAAGGTGTACAAAGATGGGATTCTTGTGAGCCAAGGAAAG
CAAATGAAAGTTTTATCTGTTGAAACAAATCAAGCCTACTAA

InterProScan

ProSiteProfiles
Pentraxin-related (IPR001759) - T[69-213] 9.998
SUPERFAMILY
ConA-like_dom_sf (IPR013320) - T[91-203] 9.99E-13
Pfam
Pentraxin-related (IPR001759) - T[102-209] 3.6E-7
ProSitePatterns
Pentaxin_CS (IPR030476) - T[175-182] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value