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- Transcript 'Boleac.CG.SB_v3.S104...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S1046.g00682.01.t
Possible name(s)
SRP72
Gene model
Location
S1046 [21,673 / 23,743]
Amino acid sequence
Length: 689
>Boleac.CG.SB_v3.S1046.g00682.01.p
MAEPSPLQSMFXELNKAIHVSDYKQVLKISNKIIHSKDGNKDEKAMHCKVVALIYLSQFE
EALKFIQTTPEIQNVLIFEKAYCHFRLRQMDEALDAVNESKELDNRQMELKAQILFKLGS
YEEALSLYKKLIKECSDDFESERKANLLAATASMALWKNQHTEIKLPLNTYEQMYNKGCE
LLGKGKSXEGEKMLENAIKACKDYFAEYPESEEEEIQDELSPLQVQLGYALQLQGREEEA
LKIYNQVLRSRPSDVGTVAIASNNIITINREQNVFDSKKKLKATLLTESQQKLVPKQLSL
MEMNKALLYMYSNQWEACRKLLKNLQRSEKNSDVPCLIQASQLQREKNHEKAITYLEDFI
ENHSDPDVHSIDLTHIKLTLVQFLYSQGHIDRACNVLESIDQICHTPGIVSLIIALCEXK
KGKESKAIKILNDAVAWHKKKQSADDIQRKLLWENAQYKIKHGRHEQAAEMLERLRVVDR
NNVKVLAQLIFAYSMFNPTKAHQLSEDLPSLEEMSVSVDVESLERNATQLLAPRYVKRQA
KQLAKMQENKEKASGDKAAPKKAVVSEAKTDQVIKTDKKKRKKXKRLPKDFNPSIEPDPE
RWTPLRERSYYKGRRRDKRKGVGTGTQGTAGSTVTDNLDMSKQSSSAGATATTKPASSPQ
VNSPKPPAGARPKGKQTARSRKKKGKGGW
Nucleotide sequence
Length: 2,070
>Boleac.CG.SB_v3.S1046.g00682.01.t
ATGGCTGAACCTAGTCCACTTCAGTCTATGTTCNCTGAGTTGAATAAAGCAATCCATGTT
TCTGACTACAAGCAAGTTCTGAAAATCAGCAACAAAATTATTCACTCAAAAGATGGAAAT
AAAGATGAAAAAGCAATGCATTGCAAGGTAGTTGCCTTGATTTATTTGAGCCAATTTGAA
GAAGCATTGAAATTCATCCAAACTACACCNGAGATTCAAAATGTTTTGATCTTTGAGAAA
GCATATTGCCATTTTCGTTTGCGTCAAATGGACGAAGCACTTGATGCTGTCAATGAATCA
AAGGAATTGGATAACCGACAAATGGAGTTGAAAGCACAGATTCTGTTTAAACTTGGCTCA
TACGAAGAGGCACTCTCTTTATATAAGAAATTGATCAAAGAGTGCTCTGATGATTTTGAA
AGTGAGCGTAAAGCTAATCTACTTGCTGCTACAGCTTCGATGGCACTTTGGAAAAATCAA
CATACCGAAATCAAACTTCCTTTAAATACGTATGAGCAAATGTACAATAAAGGATGTGAG
CTGTTGGGCAAAGGCAAAAGTAANGAAGGTGAAAAAATGCTTGAAAATGCGATCAAAGCT
TGTAAAGACTACTTTGCGGAATACCCAGAGAGTGAAGAAGAGGAAATTCAAGATGAGTTA
TCTCCGTTACAAGTACAATTGGGATACGCTCTTCAACTTCAAGGTAGAGAAGAGGAAGCA
TTGAAAATATACAATCAAGTATTGAGATCTCGTCCGTCTGATGTAGGAACTGTTGCGATT
GCATCTAACAATATCATCACCATCAACAGAGAACAAAATGTGTTTGACTCGAAGAAAAAG
TTGAAAGCGACTTTGCTAACTGAAAGCCAGCAAAAATTGGTCCCGAAACAGTTGAGTTTG
ATGGAAATGAACAAAGCTCTCCTGTACATGTATTCCAACCAATGGGAAGCTTGTAGAAAA
TTGCTGAAAAATTTGCAGCGTTCTGAGAAAAACAGTGATGTTCCATGTTTGATTCAAGCA
TCGCAACTGCAACGAGAGAAAAATCATGAGAAAGCCATCACATATCTGGAAGATTTTATC
GAAAATCATAGTGACCCGGATGTCCATTCCATTGATTTGACTCATATCAAATTGACGCTT
GTGCAGTTTCTTTACAGTCAAGGACACATTGATCGTGCTTGTAACGTACTGGAGAGCATC
GACCAAATATGTCACACGCCTGGAATTGTATCTTTGATCATTGCACTTTGTGAGNAGAAA
AAAGGAAAAGAATCGAAGGCCATCAAGATATTGAACGATGCAGTTGCATGGCATAAGAAA
AAACAGAGCGCTGATGATATACAGAGAAAATTGCTNTGGGAAAATGCNCAATACAAAATA
AAACATGGCCGGCATGAGCAAGCTGCTGAAATGCTNGAAAGATTGCGAGTTGTAGACCGT
AACAATGTCAAAGTCTTGGCACAGTTAATTTTCGCATACTCAATGTTCAACCCTACCAAG
GCTCATCAGTTGAGTGAAGATTTGCCATCTTTAGAGGAAATGTCTGTGTCCGTTGATGTG
GAAAGTCTTGAGAGAAATGCAACTCAGCTGCTTGCTCCTAGATATGTTAAACGACAAGCG
AAACAATTGGCTAAAATGCAAGAAAATAAAGAGAAGGCGTCCGGTGATAAGGCAGCACCG
AAAAAAGCAGTTGTCTCGGAAGCTAAAACCGACCAAGTGATTAAAACTGACAAAAAGAAA
CGCAAGAAGAANAAGCGACTTCCCAAAGATTTCAACCCATCTATTGAACCGGACCCCGAG
AGGTGGACGCCTTTACGTGAACGATCGTATTACAAAGGACGTAGAAGAGACAAGAGAAAG
GGTGTTGGAACTGGAACGCAAGGCACAGCAGGATCAACAGTTACCGACAATCTAGACATG
TCCAAACAGAGTAGTTCTGCTGGTGCGACCGCAACTACAAAACCAGCATCATCGCCACAA
GTTAATTCCCCAAAACCTCCTGCTGGAGCAAGGCCGAAAGGAAAACAGACCGCAAGAAGT
CGTAAAAAGAAAGGCAAAGGGGGTTGGTGA
| PANTHER |
SRP72 (IPR026270) - T[1-686] 6.8E-188 |
| PIRSF |
SRP72 (IPR026270) - T[2-689] 5.0E-180 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[6-164] 6.1E-44 - T[169-370] 1.8E-12 - T[372-518] 3.1E-8 |
| Pfam |
SRP_TPR-like (IPR031545) - T[21-151] 7.2E-20 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[52-138] 7.31E-14 - T[162-487] 6.32E-8 - T[221-257] 7.31E-14 - T[315-361] 7.31E-14 |
| SMART |
TPR_repeat (IPR019734) - T[74-107] 40.0 - T[110-138] 130.0 - T[171-204] 43.0 - T[221-254] 0.29 - T[449-482] 360.0 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[105-138] 6.726 - T[221-254] 8.88 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[105-138] 7.576 - T[221-254] 9.8 |
| Pfam |
TPR_repeat (IPR019734) - T[223-253] 0.017 |
| Pfam |
Signal_recog_part_SRP72_RNA-bd (IPR013699) - T[562-613] 1.5E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRP72_HUMAN | 39.556 % | 432 | 7.22E-143 |