- Region 'REG00000361' >
- Clone 'cima878566' >
- Transcript 'Boleac.CG.SB_v3.S100...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S100.g00403.01.t
Possible name(s)
CRISPLD1; CRISPLD2; VIT
Gene model
Location
S100 [296,713 / 308,239]
Amino acid sequence
Length: 785
>Boleac.CG.SB_v3.S100.g00403.01.p
MGIFQGIVVLLAVTSGIFAFMPRGGKYVRMQAIGDDEKLDRYDENRRDLNFLRSDYDPCY
IQEVKTSISVSCYTEAGHIDDTVFTATCPPGCDQIVNNVIGTGAYTENSAICRAAIHDGV
IEADVGGAVAVRKIEGRSSYRQSTRNGISSEGQKGGSKRSIIFQNADQARRPTYDVTCVV
QGDWIRDADFNIICPSGCGVMGDRIWGNQMYSDASSLCAAAIHNGAIQDSIGGKVHVMKT
GFQNRFGRSTKNGITSYASNIGKEAFQLEKFDVKEATMTHEVSCYFQADHIMEDVFTVIC
PPGCEEVTDKIHGTGIYTRDSFVCASAIHAGRISAPVGGLITVYKTAGKIGFVGSIQNEV
SSTGKPHGANSFIFQDTTVREPDISTVGCAIRGDNLRDDVATLACPANCDHETYEVWGTE
TYKSDSYICAAAAHAGVIDVSRGGSVTVKRVPGLQSYEASTHQRIVGKSFGKWDKSFIFA
DNIQKTSSVLAVNCDFTADLMNDTVFSIQCPSACSNVAKKVWGDGIYTSDSPLCTAATHD
GYIKDSIGGVVTVHKVEGKANYRDALRSNIQSFSYGSWSKSSVIFQRPSIEVESVYPVTC
ETRADFMVDDVFTVICPAGCDAIDNDVWGSNEYTDDSYVCGAAIHNGRIDGXANSTLAPS
QLDRIGDLELSFXNYNLQPFSTSADVGGQVTLGKIPGLDSYVGTERNSIRSNDKTKWRKS
IIFRDIVQRRASTYTISCKVEGSMIWELLYTIICPPGXXXXXXXXXXACVCQRRYLYTQN
SEVSS
Nucleotide sequence
Length: 2,486
>Boleac.CG.SB_v3.S100.g00403.01.t
TGTTTTTATTTACAGAGTTGAAACACTGCTGATTAAAACTCGCTCTTTGTCTATATCACT
ACAAACTGCCAACACATTTGGCATCGAAACTAAGCCTGCCCAAGTCAACAACATTGTCAG
GTTTCAGCATGGGCATTTTTCAAGGAATAGTTGTTTTGTTAGCTGTGACGTCCGGAATTT
TCGCTTTTATGCCACGAGGCGGAAAGTATGTGCGAATGCAAGCGATCGGGGACGATGAAA
AATTGGACCGCTACGACGAAAATCGCAGAGACTTGAATTTCTTGAGATCAGATTATGATC
CATGTTACATTCAAGAAGTGAAAACAAGTATTTCAGTGTCATGCTATACTGAAGCAGGTC
ATATCGATGACACAGTATTCACCGCCACATGTCCACCAGGATGTGACCAAATCGTCAACA
ACGTCATAGGTACCGGCGCCTACACAGAAAATTCTGCCATATGCAGAGCAGCCATCCACG
ACGGAGTAATAGAGGCTGATGTGGGAGGTGCCGTGGCGGTGAGAAAAATCGAAGGGAGAA
GCTCCTACAGACAAAGCACTCGTAATGGGATTTCATCAGAAGGACAAAAAGGAGGATCAA
AACGATCGATTATTTTTCAAAATGCCGATCAAGCAAGAAGACCTACATATGACGTAACGT
GTGTGGTGCAAGGTGATTGGATTCGTGATGCTGACTTCAATATAATTTGCCCTTCCGGTT
GTGGAGTAATGGGTGATAGGATATGGGGAAACCAAATGTACTCGGATGCGTCATCCTTAT
GCGCAGCAGCAATTCACAATGGCGCTATTCAAGATTCTATTGGCGGAAAGGTGCACGTAA
TGAAAACAGGTTTTCAGAATCGATTTGGAAGAAGCACTAAAAACGGAATCACAAGTTACG
CCTCAAACATCGGAAAAGAAGCATTTCAATTGGAAAAATTTGACGTGAAAGAAGCTACGA
TGACACACGAAGTGTCGTGCTACTTCCAAGCTGACCATATCATGGAGGATGTCTTCACTG
TAATATGTCCACCNGGATGTGAAGAAGTGACTGATAAGATACATGGCACGGGAATTTACA
CAAGAGATTCATTCGTATGTGCGAGTGCCATCCACGCAGGAAGAATTAGCGCACCAGTTG
GAGGCCTCATAACAGTTTACAAAACTGCTGGCAAAATCGGTTTCGTTGGAAGTATACAAA
ATGAAGTGAGTTCAACAGGGAAACCTCACGGAGCTAATTCTTTCATATTCCAAGATACGA
CCGTGAGAGAGCCTGATATTTCAACAGTCGGATGCGCCATCCGCGGAGATAATTTACGAG
ATGATGTGGCAACGTTAGCGTGTCCAGCAAATTGCGACCACGAAACTTACGAAGTGTGGG
GGACNGAAACATACAAGTCCGATTCATATATTTGTGCAGCTGCAGCTCATGCTGGAGTTA
TAGACGTTTCTCGCGGTGGTTCTGTGACTGTGAAACGAGTTCCAGGATTACAATCGTACG
AGGCATCAACTCATCAACGAATTGTAGGAAAATCGTTTGGAAAATGGGATAAATCATTCA
TTTTTGCAGATAATATTCAGAAGACCAGTTCAGTCCTTGCAGTGAATTGCGATTTTACTG
CTGATTTGATGAACGACACAGTGTTCTCGATCCAATGTCCGTCTGCTTGTAGCAACGTCG
CTAAAAAAGTTTGGGGTGACGGTATATACACAAGTGATTCACCTTTATGTACCGCAGCTA
CACACGATGGATACATTAAAGACTCCATCGGCGGTGTCGTAACAGTTCATAAAGTGGAAG
GGAAGGCTAATTACAGAGATGCACTGCGAAGTAACATCCAGTCCTTCAGCTATGGCTCAT
GGTCGAAATCGTCTGTCATATTTCAACGGCCGTCAATTGAAGTGGAATCGGTTTACCCTG
TCACTTGCGAAACCAGAGCAGATTTCATGGTTGACGATGTCTTCACTGTTATTTGTCCCG
CAGGATGTGACGCCATTGACAATGACGTTTGGGGTAGCAACGAGTACACCGATGACTCAT
ACGTTTGTGGTGCAGCTATACATAACGGCAGGATTGACGGTNAGGCCAATTCAACCTTGG
CGCCAAGCCAACTCGATCGGATTGGCGACCTTGAATTGAGTTTTTNTAACTATAATCTTC
AACCGTTTTCAACATCAGCTGACGTTGGCGGGCAAGTTACACTTGGAAAGATTCCTGGGT
TAGATTCTTATGTCGGGACCGAAAGGAATTCGATTCGTAGCAACGACAAAACAAAGTGGA
GAAAGTCTATCATATTTCGAGATATAGTCCAACGTAGAGCATCGACATACACTATATCTT
GTAAGGTGGAAGGAAGTATGATATGGGAGTTGTTATATACAATAATATGTCCTCCTGGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCATGTGTCTGTCAACGACGTTATTTATACA
CTCAAAATTCAGAAGTGTCTAGTTAG
| Gene3D |
LCCL_sf (IPR036609) - T[65-163] 1.5E-25 - T[172-270] 8.4E-23 - T[277-376] 6.3E-23 - T[384-481] 1.4E-26 - T[487-586] 1.5E-23 - T[594-660] 7.0E-16 |
| ProSiteProfiles |
LCCL (IPR004043) - T[66-150] 21.962 - T[172-266] 21.665 - T[278-372] 18.816 - T[383-477] 22.766 - T[488-582] 19.127 - T[594-721] 19.479 |
| SMART |
LCCL (IPR004043) - T[68-151] 3.2E-19 - T[174-257] 4.6E-15 - T[280-363] 4.4E-10 - T[385-468] 1.5E-13 - T[490-573] 4.8E-14 - T[596-712] 4.2E-5 |
| SUPERFAMILY |
LCCL_sf (IPR036609) - T[68-156] 3.27E-23 - T[173-266] 5.49E-22 - T[279-374] 5.1E-23 - T[386-479] 2.09E-24 - T[490-584] 7.59E-24 - T[597-652] 2.88E-16 |
| Pfam |
LCCL (IPR004043) - T[78-152] 1.9E-19 - T[187-260] 6.0E-17 - T[290-371] 6.4E-17 - T[400-477] 8.9E-20 - T[501-581] 2.5E-18 - T[607-720] 3.3E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CRLD2_HUMAN | 30.435 % | 83.2 | 1.47E-16 |