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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S0.g...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S0.g00121.01.t

Possible name(s)

TRAM1; TRAM1L1; TRAM2

Gene model

Boleac.CG.SB_v3.S0.g00121

Location

S0 [1,139,906 / 1,143,379]

Sequences

Amino acid sequence

Length: 383

>Boleac.CG.SB_v3.S0.g00121.01.p
MPMPRKKPKNPPVMSHEFVIQNHADIVSCVAIVLMLGLMFEVSAPLSKVFVFLQYGILEE
EKDEDGEKIGLYLTITLQKTFPSEFNRGWFDGFTIFFQALIIIVLHAVIQEYVIDKMSKK
LHLSKTKTSKFNESGQLSIWSAIAAIWAGYCVYQCDIFMXIPSLWDEYPHTVMQWQYKLF
MSIQLAYWLHMFPELYLQKVRKEEIPSRVQYYCLYFVFIAVAYAFYFWKFCLVALMLHYS
MEFVFHTSRMLYFADKNEXAQIGFKVWAVLYPIVRFVSLSLTVLVFWFGLRSAPEQGIDV
AAGNFNSNSIRTVCMTGMCFLQMWLLWQYLQLLSRRSKEQKQAASQAAKKKPAAKSKGGK
GKQKKNADSEEESRVSNGKVKKS

Nucleotide sequence

Length: 1,893

>Boleac.CG.SB_v3.S0.g00121.01.t
TTACAGAACCATTTTGGCCCTCTATTGGCAACACTAGTGTAGAGGATTTCAATTTAACTT
CTTGGGTTGCTGAAGAGGTGAGCACGATACTACAACATTTGATAGTGCGTGGCAAAAAGA
CATTAAAGACTGGTGCAATATAATTTGGAATAATTGAAAGCTTTACGGAATAATTCGATT
AAAATGCCTATGCCAAGAAAGAAGCCAAAGAATCCCCCTGTTATGAGCCATGAGTTTGTA
ATACAGAATCATGCGGATATTGTCTCATGCGTGGCTATTGTACTTATGCTTGGTCTCATG
TTTGAGGTTTCAGCTCCGCTCAGCAAGGTTTTCGTATTCCTGCAGTACGGTATCCTGGAA
GAAGAGAAGGATGAAGATGGAGAGAAAATTGGTTTGTATCTGACAATTACTTTGCAAAAA
ACCTTCCCATCAGAATTCAACAGGGGTTGGTTTGATGGATTCACAATCTTCTTCCAAGCA
CTCATTATCATTGTCCTTCATGCAGTTATTCAGGAGTATGTAATAGATAAAATGTCCAAA
AAGCTTCATCTATCCAAAACAAAGACGAGCAAATTTAACGAGTCCGGACAGTTGAGCATA
TGGTCAGCAATTGCAGCCATATGGGCTGGGTACTGTGTGTATCAGTGTGACATTTTTATG
ANTATTCCAAGCTTATGGGATGAATATCCTCATACCGTCATGCAATGGCAATATAAGCTC
TTTATGTCCATTCAGCTGGCATACTGGCTTCACATGTTTCCAGAGCTGTATCTTCAAAAA
GTTCGTAAAGAAGAGATTCCTTCAAGAGTGCAGTATTACTGCCTATATTTTGTGTTCATC
GCTGTGGCTTATGCCTTCTATTTTTGGAAGTTTTGTTTGGTTGCTCTCATGCTTCATTAC
TCGATGGAGTTTGTCTTCCACACATCAAGAATGCTGTACTTTGCAGACAAAAATGAACAN
GCTCAGATTGGATTCAAAGTATGGGCAGTATTGTATCCCATTGTGCGGTTTGTCTCTCTC
TCCCTCACAGTTCTTGTTTTTTGGTTCGGGCTACGAAGTGCTCCTGAACAAGGAATCGAT
GTTGCTGCGGGGAATTTCAACAGTAATTCGATAAGAACTGTGTGCATGACGGGAATGTGC
TTCTTGCAAATGTGGCTTTTGTGGCAATACCTTCAGTTGCTGTCGCGAAGGAGTAAAGAG
CAAAAACAAGCAGCAAGTCAAGCGGCTAAGAAAAAACCTGCGGCCAAATCTAAAGGAGGA
AAGGGCAAACAAAAGAAAAATGCCGATTCAGAGGAGGAAAGTCGAGTCAGCAATGGCAAA
GTGAAGAAAAGCTGAGAAAATTTTGAAAAGCAATAACTATGAATATTATGTTCAGCCTTG
CAATGTCATTGGTGGTCTGAAATAGGTAATAGAGACGAGGTTTATGGGATTCTCTCCTTT
ATTTTCAATTTCTATGGTTTTGTTGTGAAGTCACACTGGCTAAAATCTTTTGGTTATTTC
CTACCGATCTAGTGGAGTACCTGACTCGTGAATCCTCAAAATGCCAAAGCATGGATTAGT
ACTTCTGAAGCATCCCCTCACCTATCAAATCCGAGGGTGATGCTTCGCATCGATTTGTCC
AATATCGTGATTTATATGCTGGCTGTTAGTGGTCGTAGTTCTTGCCACGTATCCTTGTCT
CAGTGCCAGATGGTTTACTCCAGGGTTGGACATGACCTTGATAACTGCTGATTCTCAATG
TGTATGCGGTGTCAAATGTTCAACTTNACTGGTAATTTCATGCGGTCCTGAAAGCGGGTG
TACTTTTTCTTGATGAATTTAAACGGATCTCGATATTTTTCAATTTTTGGTGATGAAAGA
AAGGTATGTTGAATGTGAATTTCCAGCTCTGTG

InterProScan

PIRSF
Translocation_assoc_membrane (IPR016447) - T[1-383] 3.5E-140
Pfam
TRAM1 (IPR013599) - T[49-127] 4.4E-12
ProSiteProfiles
TLC-dom (IPR006634) - T[126-340] 9.043
SMART
TLC-dom (IPR006634) - T[129-340] 9.2E-25
Pfam
TLC-dom (IPR006634) - T[130-329] 4.3E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRAM1_HUMAN 42.188 % 297 1.07E-98
TRAM2_HUMAN 40.365 % 265 3.23E-86
TR1L1_HUMAN 34.677 % 213 6.05E-66