- Molecular Tool 'FoxF[TVC]>COE (Stolfi 2010)' >
- Transcript 'Cisavi.CG.ENS81.R65....' >
- Transcript 'Boleac.CG.SB_v3.S0.g...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S0.g00053.01.t
Possible name(s)
ADGRB2; ADGRB3; HMCN1
Gene model
Location
S0 [500,356 / 506,034]
Amino acid sequence
Length: 763
>Boleac.CG.SB_v3.S0.g00053.01.p
MLTLNIKIEKQSDSQDELDTSLLRKKRAVGTKPRHVRGVCGGSSYGRNGWLASPNFPGSS
YPALMTCNWTIIVFPRMVIQFDFVYIDMEDAPIQKRGGCMADYVMIQESQKEDSPLVGGQ
RYCGFDTTFPSIYTKSNKAYVYFKSDHDKEYQGFAIRWRAVEPPKAQFDCDFESIKDLCT
GWEQSKDDDYDWTTHNGQTQSGMTSPTGPLTDRTKKNEFGVYLYTEASGVKKGQKAVLLS
PTVRVTEKKGQCLXFWYHMRGETMGTLNVYQKEILSETNSTRELVFSKSGEQSQNWRRAD
INVTATNNKIQFLFEGIRGSSYKSDMAIDDIQMLRKPCPIPRPKLITTKTPATRPIFART
RRPXPSTTKATRRPTTTRRSRAITTTPFTTTTQADCFYNCKEVGNCVDEEYFCDGIRDCL
HKDDEEDCSAAKADSTSAAPTTSEWDKWSTWTSCTVTCGGGRSERERKCIRGGPFDCFGS
SSEGIECNTQQCLYWNEWADWSGCSRSCGEGVRMRSRTCNGGETGQLGCIGPYIEVDFCN
RVTCPKWSEWTQWSACQVSCGNGTKSRARTCQGAQNDDGPGCIGNATETKPCTHPTNPSC
GEWTEWTGFSECTRSCGVGRRMRSRQCRKNGVIAQGCPGSRTDEENCNTVGCPEWAEWKP
YSACSVTCGNGVRSRLRQCMQDGVESQSCSGDSKMEEECTYEACKDWAEWAPWSRCTSSC
GTGFHGRRRLCMKGEVRSVGCSGKSIETGLCNATPCPSKIRNV
Nucleotide sequence
Length: 2,292
>Boleac.CG.SB_v3.S0.g00053.01.t
ATGCTGACGTTGAATATCAAGATTGAGAAACAGAGCGATAGCCAAGATGAGCTCGACACG
AGTTTGCTACGCAAAAAGAGAGCTGTCGGAACCAAACCTCGACATGTTCGTGGAGTATGC
GGTGGTTCTAGTTATGGCAGAAACGGCTGGTTGGCATCTCCAAATTTTCCTGGCAGTTCA
TATCCAGCTCTCATGACTTGCAACTGGACGATCATCGTGTTTCCACGGATGGTTATTCAA
TTCGATTTCGTTTACATTGATATGGAGGATGCTCCGATCCAAAAACGAGGAGGATGCATG
GCTGATTACGTCATGATTCAAGAGAGCCAAAAGGAGGACAGCCCGCTTGTTGGCGGACAA
AGATATTGTGGCTTTGACACCACGTTTCCTTCAATTTACACGAAGTCTAACAAAGCATAT
GTTTACTTCAAATCTGACCACGACAAAGAGTATCAAGGATTTGCTATTCGTTGGAGAGCA
GTGGAACCTCCTAAGGCGCAGTTTGATTGCGATTTCGAATCCATCAAAGATTTGTGTACT
GGATGGGAGCAAAGTAAGGACGACGACTATGATTGGACTACGCATAATGGACAAACTCAA
TCAGGAATGACGTCACCCACTGGGCCTTTAACTGATCGAACGAAGAAGAATGAATTTGGG
GTTTATCTGTACACTGAAGCGTCCGGGGTCAAGAAAGGACAGAAGGCTGTGTTGCTGAGT
CCTACCGTACGNGTCACTGAAAAAAAGGGACAATGCCTCANATTTTGGTATCACATGAGA
GGGGAGACTATGGGGACACTGAACGTGTACCAGAAAGAAATCTTGTCTGAAACGAATTCA
ACTCGAGAGTTGGTGTTCTCGAAATCCGGTGAGCAAAGTCAAAACTGGAGGCGAGCTGAC
ATCAATGTAACAGCGACGAATAACAAGATACAGTTTCTCTTCGAGGGTATACGCGGTTCA
AGTTACAAAAGCGACATGGCGATCGATGACATTCAAATGCTGAGAAAACCATGTCCCATT
CCAAGACCAAAGCTCATCACGACAAAAACTCCAGCTACTCGTCCAATCTTTGCCAGGACG
AGGCGTCCGANCCCTTCTACAACGAAAGCCACAAGAAGGCCGACAACAACGAGGAGATCG
CGGGCAATAACAACAACTCCTTTTACAACCACAACTCAAGCGGATTGTTTCTACAATTGC
AAAGAAGTTGGAAATTGTGTCGATGAAGAGTATTTTTGTGATGGCATTCGCGATTGTCTT
CATAAAGATGACGAAGAAGATTGCTCAGCGGCCAAAGCAGATTCTACCTCTGCAGCACCA
ACGACCAGCGAATGGGACAAATGGTCGACATGGACATCGTGTACCGTAACCTGTGGTGGT
GGCAGATCNGAGCGAGAAAGGAAATGTATCAGAGGAGGCCCTTTCGATTGCTTTGGCAGT
TCTTCGGAAGGCATCGAATGTAACACACAGCAATGCTTATATTGGAACGAGTGGGCAGAT
TGGAGTGGATGCTCCAGATCATGCGGCGAAGGCGTCCGGATGAGATCTCGAACTTGCAAC
GGCGGAGAAACTGGACAGCTGGGATGTATCGGTCCATACATCGAAGTAGACTTCTGCAAC
CGAGTCACTTGTCCAAAATGGAGCGAATGGACGCAGTGGAGTGCATGTCAAGTTAGTTGC
GGGAACGGCACTAAATCTCGAGCACGAACATGTCAAGGCGCTCAAAACGACGACGGGCCG
GGATGTATAGGCAACGCTACAGAAACCAAACCATGTACCCATCCAACAAATCCATCATGC
GGAGAATGGACGGAATGGACTGGCTTTTCCGAATGTACGAGATCATGCGGTGTTGGCAGA
CGAATGAGATCGCGACAGTGTCGTAAAAATGGAGTTATTGCTCAAGGATGTCCCGGGAGC
AGGACCGATGAAGAAAACTGCAACACAGTCGGTTGCCCCGAATGGGCCGAATGGAAACCT
TACAGTGCATGCAGCGTCACTTGCGGAAACGGTGTCCGATCAAGACTACGACAATGCATG
CAAGATGGCGTAGAAAGTCAGAGTTGCTCTGGTGATAGTAAGATGGAGGAAGAATGCACG
TACGAGGCCTGTAAAGATTGGGCGGAATGGGCTCCTTGGAGTAGATGTACTTCTTCCTGT
GGTACTGGATTTCATGGACGGAGACGACTGTGTATGAAAGGGGAAGTGAGAAGCGTTGGA
TGCTCTGGAAAGAGCATTGAAACCGGCCTTTGCAACGCAACTCCTTGTCCAAGTAAGATT
AGAAATGTATGA
| Gene3D |
Sperma_CUB_dom_sf (IPR035914) - T[36-158] 7.2E-26 |
| SMART |
CUB_dom (IPR000859) - T[40-161] 2.2E-25 |
| CDD |
CUB_dom (IPR000859) - T[40-160] 4.90389E-24 |
| ProSiteProfiles |
CUB_dom (IPR000859) - T[40-161] 20.977 |
| Pfam |
CUB_dom (IPR000859) - T[40-157] 2.1E-17 |
| SUPERFAMILY |
Sperma_CUB_dom_sf (IPR035914) - T[46-161] 1.96E-23 |
| SMART |
MAM_dom (IPR000998) - T[165-340] 5.8E-41 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[167-338] 3.8E-40 |
| ProSiteProfiles |
MAM_dom (IPR000998) - T[168-340] 34.047 |
| Pfam |
MAM_dom (IPR000998) - T[170-339] 4.9E-41 |
| CDD |
MAM_dom (IPR000998) - T[170-338] 1.05915E-50 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[398-429] 9.788 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[440-492] 5.89E-8 - T[494-544] 2.49E-10 - T[544-593] 2.62E-10 - T[600-649] 7.19E-8 - T[654-704] 8.11E-10 - T[707-756] 3.27E-8 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[441-492] 2.2E-8 - T[493-545] 3.1E-11 - T[546-596] 7.9E-12 - T[598-652] 4.3E-9 - T[654-705] 2.4E-10 - T[706-756] 1.6E-8 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[442-493] 11.27 - T[495-543] 9.918 - T[544-596] 11.93 - T[600-653] 12.028 - T[655-703] 9.506 - T[704-757] 11.236 |
| SMART |
TSP1_rpt (IPR000884) - T[445-493] 6.1E-9 - T[495-545] 1.1E-11 - T[547-598] 1.4E-9 - T[603-653] 7.4E-8 - T[655-705] 1.9E-8 - T[707-757] 1.2E-7 |
| Pfam |
TSP1_rpt (IPR000884) - T[447-492] 2.2E-5 - T[497-544] 5.0E-9 - T[548-594] 1.5E-11 - T[605-652] 2.4E-4 - T[657-704] 6.1E-8 - T[709-756] 4.0E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 35.103 % | 177 | 9.49E-46 |
| AGRB2_HUMAN | 37.557 % | 143 | 7.35E-35 |
| AGRB3_HUMAN | 36.032 % | 142 | 1.1E-34 |