- Transcript 'Boleac.CG.SB_v3.S0.g...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S0.g00042.01.t
Possible name(s)
SLCO4A1; SLCO4C1; SLCO5A1
Gene model
Location
S0 [397,111 / 400,145]
Amino acid sequence
Length: 564
>Boleac.CG.SB_v3.S0.g00042.01.p
MLNNGIVLVNVSTIERRFHFTSTKSGIIASCYDITSCILCPLVTYFGSNSHKPRFVAAGL
MVYVVGCILNFMPHFITESYYPPESAGAGLCSESSNISETSNASGKSSAPLVLFIMGSIS
LGAGTVSLITLGLAYIDDNTTKGKSASYIGIIGGLSSIGSMCGFLIGGYSLSFYVNVGDD
THGLSSKDPAWVGNWWAPYILATAMAVCCVLMLLQFPKEIESTYTYEWYYHFARRPCFVR
LENRVSDDDKARARLNDAEFNKWLSGLPTAIKTLMKNSVMILTIVANAVDSFLLSGFSVF
FPKFLQNQFLLSPTMASVLEGTVSVPGAFVGHVASGFIVRRYQIAVPAMLKTIGIATSIS
GILSLSMMLHCSNPVKYGNAVGACQLDEHCHCDSFAFRPVCGNDSNVYFSPCHAGCRRQS
PDTGHFQDCLCINQNISSSAGTAKSGRCDERCETLIPFLILLFFLILLSFFTMTPALMVV
MRCVSPTQKSLAVGLYWLVNRLLGSIPGPLVLGKVFDASCTVWMKQGDGGQFCWVYDNAK
LARTAVILSENHLSYIELQPIITR
Nucleotide sequence
Length: 1,695
>Boleac.CG.SB_v3.S0.g00042.01.t
ATGTTGAACAACGGCATTGTTCTTGTCAACGTATCCACCATTGAACGCCGCTTTCACTTC
ACAAGCACAAAATCTGGAATCATAGCAAGCTGTTATGACATCACGTCGTGCATCTTATGC
CCTTTGGTGACGTACTTCGGAAGCAACAGCCATAAGCCACGTTTTGTTGCGGCAGGGTTG
ATGGTTTACGTTGTCGGTTGCATACTCAATTTCATGCCTCATTTCATCACGGAATCTTAC
TACCCTCCTGAAAGTGCCGGTGCAGGTCTGTGCTCCGAATCATCGAACATTAGTGAGACG
TCGAATGCATCCGGGAAATCATCAGCACCATTGGTTCTCTTCATAATGGGATCGATTTCG
TTGGGTGCAGGAACCGTGTCTCTCATCACACTGGGTTTGGCCTACATCGATGACAATACT
ACGAAAGGAAAGTCAGCCTCATATATAGGTATCATAGGCGGTCTGTCATCCATTGGATCT
ATGTGTGGTTTTCTGATTGGAGGATATTCGTTGTCATTTTATGTGAACGTTGGTGATGAC
ACTCATGGTTTATCGAGCAAAGATCCAGCTTGGGTCGGCAATTGGTGGGCTCCGTATATA
CTTGCTACAGCTATGGCAGTTTGTTGTGTGCTAATGCTGCTGCAATTCCCTAAAGAAATT
GAAAGTACGTATACATATGAGTGGTATTACCACTTTGCTAGGCGTCCGTGTTTCGTGCGT
TTAGAAAATAGAGTTTCTGATGATGACAAGGCGCGCGCGAGACTGAACGATGCCGAATTC
AACAAATGGCTATCAGGTCTGCCAACTGCAATCAAGACACTTATGAAGAACTCTGTTATG
ATATTGACCATCGTTGCGAACGCAGTTGATAGCTTTCTCCTGAGTGGATTCTCAGTGTTC
TTTCCGAAATTCCTCCAGAACCAGTTCCTCTTATCACCGACGATGGCTTCCGTTTTAGAA
GGTACAGTCAGCGTTCCAGGAGCTTTCGTCGGGCATGTCGCTTCTGGTTTTATTGTCAGG
AGGTATCAGATAGCTGTTCCAGCTATGCTAAAGACTATTGGTATTGCAACATCCATTTCT
GGTATCCTCTCTCTGTCCATGATGTTGCACTGTTCAAATCCAGTAAAGTACGGAAATGCC
GTCGGTGCGTGTCAGCTCGATGAACATTGCCACTGCGACTCTTTCGCGTTTCGACCGGTA
TGCGGGAATGATTCAAATGTCTATTTCTCGCCCTGCCATGCGGGCTGCAGGCGGCAATCG
CCCGACACAGGGCATTTTCAGGATTGTTTATGCATAAATCAGAATATTTCCTCATCCGCG
GGAACCGCAAAAAGTGGGAGATGTGATGAGCGCTGTGAAACATTGATACCCTTTCTGATT
TTGTTGTTTTTCCTCATATTACTCAGCTTCTTTACAATGACACCAGCACTGATGGTCGTA
ATGAGATGTGTTTCACCTACTCAAAAGTCACTCGCGGTCGGTTTGTATTGGTTGGTAAAT
AGACTTTTGGGAAGTATCCCGGGACCATTGGTACTGGGCAAAGTTTTTGACGCAAGTTGT
ACTGTTTGGATGAAACAAGGTGACGGTGGACAGTTTTGCTGGGTATACGACAACGCTAAA
CTCGCACGAACAGCGGTGATATTAAGTGAGAATCATCTATCATACATTGAACTGCAACCG
ATTATAACGCGATGA
| CDD |
MFS_dom (IPR020846) - T[1-384] 2.81507E-6 |
| PANTHER |
OATP (IPR004156) - T[1-546] 3.0E-149 |
| SUPERFAMILY |
MFS_trans_sf (IPR036259) - T[2-74] 3.53E-30 - T[106-228] 3.53E-30 - T[262-375] 3.53E-30 - T[457-519] 3.53E-30 |
| Pfam |
OATP (IPR004156) - T[2-541] 1.2E-130 |
| TIGRFAM |
OATP (IPR004156) - T[2-548] 6.0E-110 |
| ProSiteProfiles |
Kazal_dom (IPR002350) - T[378-430] 9.453 |
| SUPERFAMILY |
Kazal_dom_sf (IPR036058) - T[385-423] 9.7E-6 |
| Pfam |
Kazal_dom (IPR002350) - T[389-431] 8.6E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SO4A1_HUMAN | 32.804 % | 299 | 8.68E-93 |
| SO4C1_HUMAN | 31.882 % | 275 | 7.57E-84 |
| SO5A1_HUMAN | 27.504 % | 238 | 3.32E-69 |
