- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C3.424.v1....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.L149.2.v10...' >
- Transcript 'Boleac.CG.SB_v3.S0.g...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S0.g00029.01.t
Possible name(s)
KCNQ1; KCNQ3; KCNQ5
Gene model
Location
S0 [257,459 / 267,537]
Amino acid sequence
Length: 666
>Boleac.CG.SB_v3.S0.g00029.01.p
MADEIKLMKLKSVSFPSSYQCDLSSIVKGQDYRDIKTRTTDTTTCVCNSDQVINLQAERN
SENNPSFNMELDDSDSADYIDEWDNELSLGSGTSGFYSVAKHHLMVKSSPRTNTSIDDGG
RKPPRLLENYEMSAIESADKEEKGEWPHSELCDYLRDSEPKVGIKGKKIKMKKRIQIYIY
NFLERPSGAKCIAYHVTVFLMVVACLICSAISTVESLNETIMSTLLTMEYVMVVFFALEY
CVRLWSAGSIGKYKGFYGRLRFARKPIFLLDLFVVIASTVVLLFSQNGNVFATSAVRGIR
FLQILRILHMDRQGGTWRLLGSVVYVHRQELITTLYIGFLALILSSYFVYLAEKPESANG
TEIHGNSSILYDNRFDNYADALWWGVVTVTTIGYGDLVPKTWVGKVVASCFSIFAISFFA
LPAGILGSGFALKVQQKQRQKQFNRQIPAAATLIQASWRCYATRRESNCSATWKLYALPT
RHRNDSTMSSTKLKTTRRDSHKSKRSDSVVPTHTISPSSWNDVIHEVMSSSESEPLSLPA
SYKTVVRALRVLIFLVRKKEFHHCRKPYDVRDVFEQYSHGYVNITVRLKELQRRMDQTLG
KPASFNEDNAYGSDRRRQTVGFRLRRLEMKVDRIERKLDEILRRLSLVLGQIGQGSLSRE
DLQSNV
Nucleotide sequence
Length: 2,163
>Boleac.CG.SB_v3.S0.g00029.01.t
ATGGCCGATGAGATTAAACTGATGAAGTTAAAATCAGTTTCATTCCCATCTTCCTACCAA
TGTGATTTGTCATCCATTGTAAAAGGTCAAGACTATCGCGACATCAAAACGAGAACAACT
GATACAACAACTTGCGTTTGCAATTCTGATCAAGTTATCAATTTACAAGCAGAAAGAAAT
AGCGAAAATAATCCTTCCTTCAATATGGAGTTGGACGACTCAGATTCTGCTGATTATATC
GATGAATGGGACAATGAACTCAGTCTAGGTTCTGGAACATCTGGATTTTATTCTGTCGCC
AAGCATCATCTTATGGTAAAATCCTCACCACGGACTAATACGTCGATAGACGATGGTGGA
AGAAAACCTCCTCGTTTGTTGGAAAATTACGAAATGTCAGCAATAGAAAGTGCTGACAAA
GAAGAAAAAGGAGAATGGCCGCATTCGGAGTTATGTGATTACTTGCGAGATTCTGAACCT
AAGGTTGGAATCAAAGGAAAGAAAATCAAAATGAAAAAACGCATTCAAATATATATTTAC
AATTTTCTTGAGCGACCATCCGGTGCGAAGTGTATAGCTTATCATGTAACTGTGTTTCTA
ATGGTTGTGGCATGCCTGATCTGCAGCGCAATATCGACGGTCGAATCACTAAATGAAACA
ATAATGTCGACGCTACTTACAATGGAATATGTCATGGTTGTATTTTTTGCTCTTGAATAT
TGTGTGCGGTTATGGTCGGCCGGCAGCATAGGAAAATATAAAGGATTTTATGGAAGACTC
CGATTCGCCAGGAAGCCAATATTTTTACTAGATTTATTTGTTGTAATCGCGTCCACTGTT
GTACTATTATTCAGTCAAAATGGAAATGTTTTTGCTACATCAGCAGTCAGAGGAATACGT
TTTCTTCAAATTTTACGAATACTTCATATGGACAGACAAGGAGGTACATGGAGACTATTA
GGAAGTGTTGTATATGTACATCGGCAAGAACTCATCACTACTCTATATATTGGCTTTTTG
GCGCTTATTCTTTCGTCGTATTTCGTGTATCTTGCTGAAAAACCAGAAAGTGCAAACGGC
ACAGAAATTCATGGGAACAGCTCCATTCTTTACGATAATCGATTTGATAACTACGCCGAC
GCCCTTTGGTGGGGAGTGGTCACCGTGACTACTATTGGATATGGAGACTTGGTGCCCAAA
ACGTGGGTAGGAAAAGTGGTGGCTTCATGTTTCTCAATATTCGCCATATCTTTCTTTGCT
CTTCCTGCCGGGATACTGGGCTCCGGTTTCGCACTCAAAGTTCAGCAAAAGCAACGCCAA
AAGCAATTTAACCGGCAAATACCAGCGGCTGCAACCCTCATACAAGCCAGCTGGAGATGT
TACGCCACACGGCGTGAATCGAACTGTTCCGCAACTTGGAAATTATATGCGTTACCAACA
AGACATCGAAACGACTCGACAATGTCCTCGACGAAATTGAAAACAACAAGACGAGATAGT
CATAAATCGAAACGGTCTGATTCGGTGGTGCCGACACACACGATTTCACCTTCAAGTTGG
AACGATGTCATTCATGAGGTGATGTCATCAAGTGAGTCTGAACCTCTCAGCTTGCCAGCT
TCGTACAAGACTGTTGTGAGAGCACTAAGGGTCTTGATTTTTCTAGTTCGCAAAAAAGAG
TTTCACCATTGTCGCAAGCCATACGATGTGAGGGACGTCTTCGAGCAATATTCTCACGGA
TACGTTAACATAACTGTTCGTCTCAAGGAACTACAACGACGAATGGATCAAACTCTCGGA
AAGCCAGCTTCATTCAATGAGGATAACGCTTATGGATCAGATCGGCGACGACAAACGGTT
GGATTCCGTCTTCGAAGGTTGGAGATGAAGGTTGATAGAATTGAAAGAAAATTAGACGAA
ATTCTTCGACGGCTTTCGTTGGTCTTAGGCCAGATAGGACAAGGAAGCCTATCGAGGGAG
GATCTGCAAAGTAATGTGTGACGAATTGACTAAACTGCCCTTTTCCTACTTACTGCTGCA
CCTGCCATCTGCTACAGAATTGTAACATCGCTGTTGCTTTCGCTATTCTTGGATGACAAA
ACTCGGATTGAGATTCTATAAGCCTACCCACCCGACTTGAAAATTACTGTACCAGAGTAC
CAC
| PANTHER |
VG_K_chnl (IPR028325) - T[166-487] 8.2E-199 - T[491-643] 8.2E-199 |
| Pfam |
Ion_trans_dom (IPR005821) - T[196-433] 2.9E-26 |
| PRINTS |
VG_K_chnl (IPR028325) - T[227-250] 1.6E-13 - T[375-397] 1.6E-13 - T[404-430] 1.6E-13 |
| PRINTS |
K_chnl_volt-dep_KCNQ (IPR003937) - T[235-254] 3.7E-21 - T[255-274] 3.7E-21 - T[317-336] 3.7E-21 |
| Pfam |
K_chnl_volt-dep_KCNQ_C (IPR013821) - T[521-642] 7.5E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KCNQ1_HUMAN | 50.738 % | 499 | 2.13E-169 |
| KCNQ3_HUMAN | 42.268 % | 357 | 4.75E-112 |
| KCNQ5_HUMAN | 42.495 % | 396 | 2.05E-126 |