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  1. Transcript 'Boleac.CG.SB_v3.S0.g...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S0.g00002.01.t

Possible name(s)

MED13; MED13L

Location

S0 [9,196 / 15,844]

Sequences

Amino acid sequence

Length: 1,741

>Boleac.CG.SB_v3.S0.g00002.01.p
MSSGNSLANGGKLDDCHSSIYSLAKLDCLRWRTFTGSLSLPTSPSDDPILDAFGKCLXQD
IVAVWRKKPKNSSFSMGFGGFNNNGXNSRSDIKKELWIFWWGDQNEPSVAAIGNTQGLTL
ESESSWEDQGLSYECRTLLFKAIHNLIEKCLLQKGFVXIGKWFVQPHRREDDDNKYQKLS
ISFTFFIRGEQWICTTVDIAQHQPIERINNHQISPXKEVILSPYGLRATLTGVSFKSQHD
QSVRSVVSEWQMFYPIKHFESSGDEIPVPPVIEVYLCGVRMNYPSMYLLVPFEIQSPVKE
NNPSWNNDKRAATDNSMQGDFPSIGSFQDSVGLSMNEMMTSPTSESHHDPSMSESTTCLV
TKLLNRVVHASQLSTENEINGTIHHSATEKLLPWPKLSCQFKKARHRIRNYQPSSDEDLN
QSSRQKYAGKWFVQPHRREDDDNKYQKLSISFTFFIRGEQWICTTVDIAQHQPIERINNH
QISPXKEVILSPYGLRATLTGVSFKSQHDQSVRSVVSEWQMFYPIKHFESSGDEIPVPPV
IEVYLCGVRMNYPSMYLLVPFEIQSPVKENNPSWNNDKRAATDNSMQGDFPSIGSFQDSV
GLSMNEMMTSPTSESHHDPSMSESTTCLVTKLLNRVVHASQLSTENEINGTIHHSATEKL
LPWPKLSCQFKKARHRIRNYQPSSSFNKIQLEHSINFTSRKRKMEEETQLQDHTDNNAHH
VQNAVMRQHVQVGVVSGSLAGMAVSSDPYEFEEDEIGNDSTPSFTWPSDNATSEMITKKN
PNIASLLQQNPHNNMRGFMFNEPIGNDKPLSSLKEKEDLKVSPLDLVNIFDDNAMSGHPL
SKQPLTRDYAPLVLKPSKLMQGMSYTPSWQIPVEXYMTQNNVVASIENHEEGSFMRTPDP
PTPAPPSYSVXTPASVPLQSPAPQQTPRTPRTPRTPRPGSSPATSTPNPAAQGRFPVHTP
QTSVSSSVAHSVIGNCRASSIYVNLMXSDSVLNFFRDISFDQCPMCVCNDNPGINIRSRD
VDLGYXPSMVLNSTDGQCACSCGFSAVRNRNLSVGAGLFLEDELDIVGKDLEDLIIKSRD
AERKPPDSSVQEAMDLALKHAANPYFKVKGIDSQSYVKSQAYNVAAHHDIKEACVEAING
GITVMETSTQPKIKXENCRNVIHSWNDSRYMKNPSSSDMYQIMLNLQPTLQDAIQNIKQD
RSYQFVQRVQGPLTWLDFCKDSNPGNTGSSGPLPIPMFLVGQSHDWATVSPFALDYWEKL
YLEPYAGKTNISYLTVCPDIEHIFVAAKFFFSELSQAYDLCRLGTMKPLCRNDNGLICVS
NNAMNTLNMPDSNKGTENGNQQSSLPNHVGANSWEKSVERYVSACRDSLYPLFNIXLPTP
NENSAMKEESPSQIPGTMPNAVGKSMSNRPPTPLPPRLKMSKDFLAPFTSKSNSNDGTML
VVYFIDPFIVDECSLFSIAIWKCYGEIXKSLPEAKKYSVVIQIVPLDXXLQNAGSLHKSS
LSKQVYQLCNQCRVTGYKHPSVYSACLISMEPEGAFTILPDSVVKITLFGRNAGSGQQVT
LKTPEDASCTHIYVFPTSSVVQTSLGGGFQNENIDDIIGLNGFTLPIGDEEDFDGINDIF
SAPSPTSNMQPTDDIGQMKQQPDRLMSTDMTEEISLQQQPLALGYYVSTAPAGPLPDTFW
NSCPHAKSKCPFALHIQVGSEXMGNMGSGAPNXEHSKLDSHKTADVLRYVMENYNALSWL
T

Nucleotide sequence

Length: 5,223

>Boleac.CG.SB_v3.S0.g00002.01.t
ATGAGCTCTGGAAACTCTCTTGCAAATGGGGGAAAGTTAGATGACTGCCATTCATCGATC
TATTCACTTGCTAAATTGGACTGCTTGCGATGGAGAACATTCACTGGATCATTATCGTTA
CCAACCAGTCCTTCAGACGATCCCATCTTGGATGCATTTGGAAAATGTTTGGNNCAAGAT
ATTGTTGCAGTATGGCGNAAGAAACCAAAAAATTCATCATTTTCAATGGGCTTTGGTGGA
TTTAATAATAATGGAATNAACTCTAGAAGTGATATTAAAAAAGAACTTTGGATATTTTGG
TGGGGAGATCAAAATGAGCCTTCGGTTGCNGCTATTGGAAATACTCAAGGACTAACTCTG
GAATCTGAAAGCTCATGGGAAGATCAAGGACTTTCGTATGAATGCAGAACTTTATTATTT
AAAGCTATTCATAATCTAATAGAAAAATGTTTACTTCAAAAAGGTTTTGTGNGAATCGGC
AAATGGTTTGTTCAACCGCATAGAAGAGAAGATGATGACAACAAGTATCAAAAATTGTCA
ATATCTTTTACGTTTTTTATTCGTGGTGAGCAGTGGATATGCACCACTGTTGATATCGCA
CAGCATCAGCCTATTGAAAGGATCAACAACCATCAAATTTCCCCANCTAAAGAAGTGATA
TTGAGCCCTTATGGACTGAGAGCTACTCTTACTGGAGTGAGTTTTAAATCACAGCATGAC
CAATCTGTACGGTCTGTTGTAAGTGAATGGCAGATGTTTTATCCAATCAAACATTTTGAA
AGCTCAGGTGATGAAATTCCTGTTCCTCCGGTCATTGAAGTTTATTTGTGTGGTGTTCGT
ATGAATTATCCTTCAATGTATTTGTTAGTCCCGTTTGAGATCCAATCTCCTGTTAAAGAA
AACAACCCATCCTGGAACAACGATAAGAGAGCTGCCACTGATAATAGCATGCAAGGAGAT
TTTCCCTCAATTGGTTCCTTCCAAGATAGTGTCGGACTATCCATGAATGAAATGATGACA
TCACCCACATCAGAATCTCATCATGACCCGTCTATGTCTGAATCTACCACCTGTCTCGTC
ACTAAACTTTTGAACCGGGTTGTGCATGCCAGTCAGTTATCCACAGAAAATGAAATCAAT
GGCACCATACATCATTCAGCGACGGAAAAGCTCTTGCCATGGCCGAAGTTGTCTTGCCAA
TTCAAAAAAGCGCGACATAGAATACGCAATTATCAACCTTCAAGTGATGAAGATTTAAAT
CAGTCTTCCCGCCAAAAATACGCNGGCAAATGGTTTGTTCAACCGCATAGAAGAGAAGAT
GATGACAACAAGTATCAAAAATTGTCAATATCTTTTACGTTTTTTATTCGTGGTGAGCAG
TGGATATGCACCACTGTTGATATCGCACAGCATCAGCCTATTGAAAGGATCAACAACCAT
CAAATTTCCCCANCTAAAGAAGTGATATTGAGCCCTTATGGACTGAGAGCTACTCTTACT
GGAGTGAGTTTTAAATCACAGCATGACCAATCTGTACGGTCTGTTGTAAGTGAATGGCAG
ATGTTTTATCCAATCAAACATTTTGAAAGCTCAGGTGATGAAATTCCTGTTCCTCCGGTC
ATTGAAGTTTATTTGTGTGGTGTTCGTATGAATTATCCTTCAATGTATTTGTTAGTCCCG
TTTGAGATCCAATCTCCTGTTAAAGAAAACAACCCATCCTGGAACAACGATAAGAGAGCT
GCCACTGATAATAGCATGCAAGGAGATTTTCCCTCAATTGGTTCCTTCCAAGATAGTGTC
GGACTATCCATGAATGAAATGATGACATCACCCACATCAGAATCTCATCATGACCCGTCT
ATGTCTGAATCTACCACCTGTCTCGTCACTAAACTTTTGAACCGGGTTGTGCATGCCAGT
CAGTTATCCACAGAAAATGAAATCAATGGCACCATACATCATTCAGCGACGGAAAAGCTC
TTGCCATGGCCGAAGTTGTCTTGCCAATTCAAAAAAGCGCGACATAGAATACGCAATTAT
CAACCTTCAAGCTCCTTTAATAAAATACAGCTGGAGCATTCAATAAATTTCACTAGTAGG
AAAAGAAAAATGGAAGAGGAAACTCAACTTCAAGATCATACAGATAATAATGCTCACCAT
GTTCAAAACGCTGTGATGCGTCAACACGTTCAAGTTGGTGTTGTTTCAGGTAGCCTTGCT
GGCATGGCTGTGTCATCCGATCCTTATGAATTTGAAGAAGATGAAATTGGAAACGACAGC
ACCCCATCATTCACTTGGCCTAGTGACAATGCTACGTCGGAGATGATTACTAAGAAAAAT
CCAAACATCGCAAGTCTGCTGCAGCAAAACCCCCACAACAATATGCGAGGATTTATGTTC
AATGAGCCAATTGGTAATGATAAACCACTGTCTTCCCTCAAGGAAAAAGAAGATTTGAAA
GTTTCCCCACTTGATTTGGTAAACATTTTTGATGACAATGCNATGAGTGGGCACCCTTTG
AGCAAACAACCCCTCACCAGGGACTATGCCCCACTTGTACTGAAACCATCAAAATTGATG
CAAGGTATGTCGTACACACCTTCATGGCAAATTCCTGTTGAGNCATATATGACTCAAAAC
AATGTGGTAGCATCTATTGAAAATCATGAAGAAGGTTCATTTATGCGAACACCCGATCCT
CCNACTCCTGCTCCTCCCTCCTACTCTGTANACACACCTGCATCAGTGCCACTGCAATCT
CCTGCACCTCAACAAACACCTCGTACGCCGAGAACTCCAAGGACTCCACGCCCTGGTTCC
TCCCCTGCGACATCTACGCCCAACCCTGCCGCTCAAGGACGATTTCCTGTACACACTCCT
CAAACAAGTGTTTCATCATCCGTCGCACACTCAGTGATTGGGAATTGCCGTGCTTCTTCC
ATATATGTTAATTTGATGNTGTCTGATTCTGTCTTAAATTTTTTTCGTGATATCTCGTTC
GATCAATGCCCAATGTGTGTATGCAATGATAATCCAGGCATCAATATCCGTAGTCGGGAT
GTCGATTTGGGGTACNTCCCNTCAATGGTTCTTAATTCAACTGACGGCCAATGTGCATGC
TCATGTGGATTTAGTGCTGTCCGAAACCGCAACCTATCTGTTGGTGCTGGNCTGTTTTTG
GAAGATGAATTGGATATTGTCGGTAAAGATCTTGAAGATTTGATAATCAAGTCTAGGGAT
GCAGAGCGTAAGCCGCCGGACTCGTCTGTGCAAGAAGCTATGGATTTGGCACTGAAACAT
GCTGCTAATCCATATTTTAAAGTGAAAGGTATAGACAGTCAATCNTATGTTAAAAGCCAA
GCTTACAATGTTGCTGCTCATCATGATATCAAAGAAGCGTGTGTTGAAGCCATCAATGGT
GGAATTACAGTGATGGAGACCAGTACTCAACCAAAGATCAAANTTGAAAATTGCAGAAAT
GTTATCCATTCGTGGAATGATTCACGATATATGAAAAATCCTAGTTCTTCAGACATGTAC
CAGATTATGCTAAACCTGCAACCTACGTTACAAGATGCAATTCAAAATATCAAGCAGGAC
CGATCTTATCAATTTGTACAACGAGTCCAAGGCCCTCTTACGTGGCTTGATTTTTGTAAG
GACAGTAATCCTGGTAACACTGGTTCATCGGGTCCACTTCCAATACCAATGTTTCTTGTT
GGGCAAAGTCATGATTGGGCCACTGTTTCGCCATTTGCTCTTGATTATTGGGAGAAACTG
TACTTGGAACCATATGCAGGCAAAACCAACATTTCATACCTTACGGTTTGCCCTGATATC
GAACACATTTTTGTGGCAGCCAAGTTCTTTTTTTCGGAATTAAGTCAGGCGTATGATCTT
TGCCGACTTGGTACTATGAAACCTCTTTGTAGAAATGACAACGGACTGATTTGTGTGTCA
AATAATGCCATGAATACTTTAAATATGCCTGATTCAAACAAAGGTACAGAAAACGGAAAT
CAGCAATCATCTCTTCCAAATCATGTCGGGGCGAACTCGTGGGAAAAGTCTGTTGAACGT
TATGTCTCNGCATGTCGTGATTCTTTGTACCCNCTTTTCAATATTGANTTACCAACTCCT
AATGAAAACTCTGCCATGAAAGAGGAATCTCCNAGTCAGATTCCTGGTACAATGCCAAAT
GCGGTGGGNAAGTCAATGTCTAACCGCCCACCAACACCCTTGCCGCCAAGACTCAAAATG
AGCAAAGACTTTCTAGCACCGTTTACTAGCAAAAGTAACTCCAATGATGGAACTATGTTG
GTTGTTTACTTCATAGATCCGTTCATTGTTGATGAATGCTCGTTATTCTCCATTGCAATT
TGGAAATGTTACGGGGAGATTATNAAATCTTTACCAGAGGCCAAAAAATATTCAGTTGTG
ATACAAATAGTACCTCTCGATGANNTCCTACAGAACGCAGGCTCACTACATAAATCAAGC
CTATCTAAGCAGGTTTATCAACTATGCAATCAATGCCGGGTCACAGGATACAAACATCCG
AGTGTGTACAGTGCATGTCTGATTTCAATGGAGCCAGAAGGTGCTTTCACGATTTTGCCA
GACTCGGTAGTAAAGATTACCCTTTTCGGTCGAAATGCAGGAAGTGGACAACAAGTTACA
CTGAAAACTCCAGAAGATGCATCCTGTACTCATATATACGTATTCCCAACATCGTCGGTC
GTTCAGACATCATTGGGGGGAGGCTTCCAAAATGAAAATATTGATGATATCATAGGCCTC
AATGGATTCACTCTACCTATTGGCGATGAGGAAGATTTTGATGGCATTAATGATATATTT
TCTGCGCCATCGCCTACAAGCAATATGCAACCTACTGATGATATCGGTCAAATGAAGCAG
CAGCCGGATCGATTAATGTCAACTGATATGACTGAAGAAATCTCATTGCAACAACAGCCT
TTGGCTTTGGGATATTATGTTTCAACAGCACCGGCTGGTCCACTGCCTGATACATTTTGG
AATTCATGTCCACATGCAAAATCCAAATGTCCGTTTGCCCTCCATATCCAAGTAGGCAGT
GAGGANATGGGCAATATGGGGAGTGGTGCCCCTAACGANGAACACAGTAAGTTGGACTCT
CACAAAACTGCGGATGTTTTGAGATATGTAATGGAGAATTATAATGCTTTATCGTGGCTC
ACA

InterProScan

Pfam
Mediator_Med13_N_met/fun (IPR021643) - T[7-308] 1.5E-54 - T[428-577] 1.3E-16
Pfam
Mediator_Med13 (IPR009401) - T[1441-1516] 8.0E-5 - T[1519-1741] 2.3E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MD13L_HUMAN 42.949 % 236 1.84E-62
MED13_HUMAN 38.387 % 223 2.4E-58