- Transcript 'Cisavi.CG.ENS81.R77....' >
- Transcript 'KH2012:KH.C14.172.v1...' >
- Transcript 'KH2012:KH.C1.96.v1.A...' >
- Clone 'cslv006k09' >
- Transcript 'Moocci.CG.ELv1_2.S98...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S98530.g01452.01.t
Possible name(s)
SRP72
Gene model
Location
S98530 [10,842 / 25,028]
Amino acid sequence
Length: 690
>Moocci.CG.ELv1_2.S98530.g01452.01.p
MAEVTPLQSSFTELNKAIQVADYKQVLKIANKILHSKDGNAEVKAMHCKVVAFIHMDMFS
EALKYIETNEACNSTLIFEKAYCQYRLLQTEKALDTLEESPSSDIRIIELKAQILYKLGY
YEDSFNLYRQLIKDCADDYDEERKTNLLASHSALCLWEEAKQADLGLKAETYEQMYNKAC
SYLGENKYQKALDLLSKAISSCREIYADDDEISEEEIESEIVVMKVQQGFALQMLGKVDE
ALAIYNQVLKIRPNDVALVAVASNNIISINKEQNVFDSKKKLKATMVQGVDQKLTSHQMK
IIEFNRALLYMYSNQWDACRKLLKSLQRRHKDSDIPCLIQAAQHAREKNYNKAIDYLKNF
IETYSDPDISSLNLTNVKLALVQLLLDQDKIDDVCILLSSMEDLSNSPAIVSALVALRGN
RQNNITAAVEILTRAIDWHKEHKSDKKIICKLLWECSQWLLKAKNPKKAAEVLEELREQD
KGNVKILAQLIFAYTQFNQKKAHQVSEHLPSLEEMSVDINVNELERTSSLFTPRYVKRQA
KQKQKTTADVKTVTAEKKKDGKEVVSETRDAETKIKKKRKKKNKPAQNVDPKVGADPERW
LPLRERSYYKGRRKDRRKGVGKGTQGTTAAASDAYDITKTTSQTPASPKPGSSNSTPINS
PKPSASMGAKPKAAQAKQNAKKKKKKKGGW
Nucleotide sequence
Length: 2,312
>Moocci.CG.ELv1_2.S98530.g01452.01.t
GATTTGCAACGTGTGTGTGTGGTCGTTAAAACATGTTTTAAAATAGGTATTCTTAAAAGT
TTGTCCACAAAAATAAATAACTGGTAGGCCTTAAATATGGCCGAAGTTACTCCTTTGCAA
TCGTCTTTTACGGAATTAAACAAAGCTATTCAAGTTGCTGATTATAAACAAGTTTTAAAG
ATCGCTAATAAAATCCTACACAGCAAAGATGGAAATGCAGAGGTTAAAGCCATGCATTGC
AAGGTCGTTGCTTTCATACACATGGACATGTTTTCAGAAGCGCTAAAATATATTGAAACC
AACGAGGCTTGCAATAGCACTTTGATATTTGAAAAAGCATATTGTCAATATCGCCTTTTG
CAAACGGAGAAAGCTTTGGATACCTTGGAAGAATCTCCAAGTTCTGATATTCGAATTATA
GAATTGAAAGCTCAAATACTGTACAAACTTGGATATTACGAAGATTCGTTTAATCTGTAC
AGACAGTTGATCAAAGATTGTGCAGATGATTATGACGAAGAAAGAAAAACAAACCTACTT
GCTTCGCATTCAGCATTGTGTTTGTGGGAAGAAGCTAAGCAGGCTGATCTGGGACTAAAA
GCAGAAACATATGAACAAATGTACAACAAAGCTTGCAGTTATTTAGGGGAAAATAAGTAC
CAGAAAGCGCTTGATTTGTTGAGTAAAGCGATTTCGTCATGTCGCGAAATTTATGCTGAC
GATGATGAAATTAGTGAGGAAGAAATTGAAAGTGAAATTGTTGTTATGAAGGTACAACAA
GGTTTTGCCCTTCAAATGCTTGGTAAAGTTGACGAGGCTTTGGCGATATACAACCAAGTT
CTTAAAATTCGTCCGAACGATGTCGCGCTTGTTGCTGTCGCTTCTAATAACATCATCAGT
ATTAATAAAGAGCAAAATGTGTTTGATTCCAAGAAGAAACTGAAAGCAACGATGGTGCAG
GGTGTTGATCAGAAATTAACGAGCCACCAAATGAAAATCATCGAGTTTAACAGAGCTCTT
CTTTATATGTATTCTAATCAGTGGGATGCTTGCCGGAAATTGCTAAAGTCTCTGCAACGT
CGGCACAAGGACAGCGATATTCCATGTTTAATTCAAGCGGCCCAACATGCCAGGGAGAAG
AACTACAATAAAGCAATCGATTATTTGAAGAACTTCATCGAGACATATTCTGACCCCGAT
ATTTCAAGCCTCAATTTGACCAACGTAAAACTGGCTCTTGTACAACTGCTACTGGACCAA
GACAAGATTGACGATGTCTGCATTTTGCTTTCATCGATGGAGGACCTCAGTAATTCACCA
GCCATTGTTTCTGCGTTGGTCGCATTGCGCGGAAACCGTCAAAATAACATCACAGCTGCC
GTAGAGATATTAACCAGGGCTATTGATTGGCATAAGGAACATAAATCGGATAAAAAAATA
ATATGCAAGCTTTTATGGGAGTGCTCACAATGGCTGTTAAAAGCGAAGAACCCTAAGAAA
GCCGCAGAAGTATTAGAAGAGTTGAGGGAACAAGACAAGGGCAATGTTAAGATTCTCGCT
CAGCTTATCTTTGCTTATACACAGTTCAACCAAAAAAAAGCACACCAAGTAAGTGAACAT
TTGCCTTCCCTTGAAGAGATGTCAGTCGACATTAATGTTAACGAATTAGAACGAACGTCG
AGTTTATTTACCCCTCGATATGTCAAACGACAAGCAAAACAGAAGCAGAAAACCACTGCG
GACGTTAAAACCGTTACTGCTGAGAAAAAGAAAGATGGAAAAGAGGTTGTTTCTGAAACT
AGGGATGCAGAGACAAAAATAAAGAAAAAGCGCAAGAAGAAAAACAAGCCGGCACAGAAT
GTTGACCCGAAAGTTGGGGCAGACCCAGAACGGTGGCTTCCATTACGAGAAAGATCCTAC
TACAAAGGCAGGAGGAAAGACAGAAGAAAGGGAGTCGGGAAAGGAACTCAGGGAACAACA
GCCGCTGCAAGTGATGCATATGACATCACGAAGACAACTTCTCAAACCCCAGCATCACCG
AAACCTGGTTCTTCCAACAGCACACCAATTAACTCCCCAAAACCCTCTGCTAGTATGGGG
GCCAAACCAAAAGCTGCTCAAGCGAAACAGAATGCTAAAAAGAAAAAAAAGAAAAAGGGA
GGGTGGTAGATACTGTTCTATATCATCGTTGCTATTTCTATGGTGTAATTTTTTTCGGAA
ACAACAAAATACAAACATCTTTGTGTGCAATGGCTTGAGTGAGTGTAATAAAAGAATTTT
ATTATGGGAAATAAATCATTGAATTTTGAAAA
| PIRSF |
SRP72 (IPR026270) - T[1-690] 1.2E-179 |
| PANTHER |
SRP72 (IPR026270) - T[2-687] 4.1E-194 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[6-162] 3.8E-43 - T[163-280] 7.0E-10 - T[281-509] 4.8E-10 |
| Pfam |
SRP_TPR-like (IPR031545) - T[21-152] 7.7E-24 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[49-133] 3.8E-7 - T[105-257] 1.59E-13 - T[222-257] 2.98E-11 - T[300-376] 2.98E-11 - T[422-499] 4.81E-5 |
| SMART |
TPR_repeat (IPR019734) - T[172-205] 0.57 - T[222-255] 0.013 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[172-205] 5.959 - T[222-255] 8.821 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[172-205] 6.7 - T[222-255] 9.934 |
| Pfam |
TPR_repeat (IPR019734) - T[227-254] 0.12 |
| Pfam |
Signal_recog_part_SRP72_RNA-bd (IPR013699) - T[543-611] 5.3E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRP72_HUMAN | 39.97 % | 460 | 1.27E-153 |