- Transcript 'Moocci.CG.ELv1_2.S98...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S98530.g01451.01.t
Possible name(s)
SHMT1; SHMT2
Gene model
Location
S98530 [7,619 / 11,065]
Amino acid sequence
Length: 463
>Moocci.CG.ELv1_2.S98530.g01451.01.p
MNGDNGSDWLQQPLQQADPDVYQIIRKEKERQRCCLELIASENFTSRAAHDSLGSCLSNK
YSEGYPGIRYYGGNENIDELERLTQKRALEAYKLDPNEWAVNVQPYSGSPANFAVYTAIV
EPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVDPKTGLIDYDLLAQNAKL
FKPKLIIAGMSCYPRVFDYKRMREIADENKAYLLADMAHISGLVAAGVTPSPFEYSDIVT
TTTHKTLRGPRAGIIFCRKGARRVDAEGKVLEKYNLEKPINEAVFPGLQGGPHNHQIGAI
AICLGQAMSDKFVMYQKQVIVNAKHMAAKLLKLGYDVVTGGTDTHLILVNLQSKGTDGNR
ADKVLDAIGVTCNKNTCPGDKSALRPSGLRLGSPALTSRGFKEDDFTKVVEFLDQGIKLT
LEIQKMAGPKAPIKEFKAILNENEEIVKKHSVSLEQLLVWPPY
Nucleotide sequence
Length: 1,392
>Moocci.CG.ELv1_2.S98530.g01451.01.t
ATGAATGGTGATAATGGATCAGATTGGTTGCAACAACCTCTACAACAAGCCGATCCTGAT
GTGTATCAGATAATTCGCAAAGAAAAAGAAAGACAACGATGCTGTTTAGAGTTAATTGCT
TCAGAAAACTTCACAAGCAGAGCTGCACATGACAGTTTGGGGTCTTGCCTGTCTAATAAA
TATTCAGAGGGTTATCCAGGTATTCGATACTATGGCGGAAATGAAAATATCGATGAATTG
GAAAGATTAACACAGAAAAGGGCTCTTGAAGCCTACAAACTGGACCCTAATGAGTGGGCA
GTAAATGTTCAACCTTATTCAGGATCCCCAGCTAATTTTGCAGTTTACACAGCAATCGTT
GAACCACATGGTAGAATAATGGGTCTTGATTTACCTGATGGTGGTCATTTGACCCATGGA
TTCATGACAGAGAAAAAAAAGATTTCAGCAACTTCAATATTTTTTGAATCAATGCCTTAT
AAAGTTGACCCTAAAACTGGTTTAATTGATTACGATTTGTTAGCTCAAAATGCAAAGTTG
TTTAAACCGAAACTTATCATTGCTGGAATGAGCTGTTATCCGCGAGTGTTCGATTATAAA
AGAATGAGAGAAATAGCTGATGAAAATAAGGCTTATTTATTAGCAGATATGGCTCATATA
AGTGGATTGGTTGCAGCCGGAGTTACTCCATCACCATTTGAATATAGCGACATTGTAACG
ACAACAACTCATAAAACACTAAGAGGTCCAAGGGCTGGTATTATTTTCTGTAGAAAAGGA
GCCAGAAGAGTTGATGCTGAAGGGAAGGTTTTGGAGAAATACAATTTGGAAAAACCTATA
AATGAGGCGGTGTTTCCAGGTTTGCAAGGAGGGCCTCATAACCACCAAATAGGAGCTATT
GCAATTTGTCTTGGTCAAGCAATGTCTGATAAATTTGTCATGTATCAGAAACAAGTAATT
GTTAATGCTAAGCACATGGCTGCTAAATTACTTAAGCTTGGGTATGATGTCGTAACTGGT
GGCACAGATACCCATTTAATACTTGTTAATTTACAATCCAAAGGTACTGATGGAAACAGA
GCGGACAAAGTATTAGATGCCATAGGTGTGACTTGTAACAAAAATACTTGTCCTGGTGAC
AAGTCTGCTCTTAGACCAAGCGGATTAAGGTTAGGTTCTCCTGCATTGACATCTCGTGGC
TTTAAGGAGGATGATTTTACGAAGGTTGTGGAATTTCTGGATCAGGGAATTAAGCTAACT
TTAGAGATTCAAAAAATGGCCGGACCAAAAGCCCCAATTAAAGAATTCAAAGCAATCTTA
AATGAAAATGAAGAGATTGTAAAAAAACATTCTGTTTCGCTTGAGCAGCTTTTGGTTTGG
CCCCCATACTAG
| PIRSF |
Ser_HO-MeTrfase (IPR001085) - T[4-459] 3.6E-172 |
| SUPERFAMILY |
PyrdxlP-dep_Trfase (IPR015424) - T[9-444] 2.04E-172 |
| Hamap |
Ser_HO-MeTrfase (IPR001085) - T[13-454] 41.949 |
| CDD |
Ser_HO-MeTrfase (IPR001085) - T[16-436] 0.0 |
| Gene3D |
PyrdxlP-dep_Trfase_dom1 (IPR015422) - T[18-42] 1.4E-204 - T[318-449] 1.4E-204 |
| Gene3D |
PyrdxlP-dep_Trfase_major (IPR015421) - T[43-317] 1.4E-204 |
| ProSitePatterns |
Ser_HO-MeTrfase_PLP_BS (IPR019798) - T[237-253] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLYC_HUMAN | 70.07 % | 608 | 0 |
| GLYM_HUMAN | 60.802 % | 577 | 0 |