- Molecular Tool 'FGF8/17/18>Pax3/7::WRPW (Stolfi 2011)' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Molecular Tool 'Hr-PEM delta 172-257 mRNA' >
- Transcript 'KH2012:KH.C2.917.v1....' >
- Transcript 'Moocci.CG.ELv1_2.S65...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S656666.g31103.01.t
Possible name(s)
FBXW11; FBXW7; TRAF7
Gene model
Location
S656666 [51,133 / 55,763]
Amino acid sequence
Length: 351
>Moocci.CG.ELv1_2.S656666.g31103.01.p
MAKFCVLFFLYFGIASFYRKPMYGDLNLSNHCRWTIRRTLLYLDLLSQNQNKLNEELRDF
RQSTALITNELQDLNTRLNMGGIGFYIFDPQQIFKCKGTFVGHAAPVWCLCVHGDLLFSG
SSDKNIKVWDTATNYKCQKTLEGHTNIVLALTAHGNKLYSGSSDCTIKVWDISTLEEVKS
ISGHDNGVCTMVCSSNLLFSGSLKIIKVWKIEGNDLIHQKDLTGLNHWVRALFAAQNYVY
SGSYQTVKIWDIRTLELVHVLETSGGSVYSITVTNHHIVCGTYENCIHVWDIRTHEQLAT
LTGHIGTVYAVVAMSTPDQTKVFSASYDRSIRIYKQSQKNTKERRTLNLNK
Nucleotide sequence
Length: 1,056
>Moocci.CG.ELv1_2.S656666.g31103.01.t
ATGGCAAAATTTTGTGTTTTGTTCTTTTTATACTTTGGAATTGCATCATTTTACCGGAAA
CCAATGTATGGAGATTTGAATTTGTCAAATCACTGTAGATGGACCATAAGAAGAACATTG
TTGTATTTAGATTTACTCAGCCAGAACCAAAACAAACTAAACGAGGAACTGCGAGATTTT
CGCCAGAGCACAGCCTTGATTACGAATGAACTACAGGATCTTAATACCAGGCTTAATATG
GGTGGAATTGGATTTTATATATTTGACCCACAACAAATATTTAAATGTAAAGGAACATTT
GTTGGCCATGCTGCTCCAGTCTGGTGCCTCTGCGTTCATGGGGATCTTCTTTTTAGTGGG
TCGTCTGACAAAAATATTAAGGTTTGGGACACAGCGACCAATTATAAATGCCAAAAGACT
CTTGAAGGTCACACAAATATTGTACTTGCACTCACAGCACATGGTAACAAGTTATACAGT
GGTTCCTCAGATTGTACCATAAAGGTGTGGGACATTAGTACACTGGAGGAAGTAAAGTCT
ATAAGTGGTCATGATAACGGAGTATGTACGATGGTCTGTAGCTCTAATTTATTGTTCAGC
GGTTCCCTTAAAATTATCAAGGTTTGGAAAATAGAAGGAAATGATCTTATCCACCAGAAA
GACTTGACAGGTTTAAACCACTGGGTGCGTGCATTGTTTGCGGCACAGAATTATGTTTAT
AGCGGATCCTATCAAACTGTCAAGATCTGGGACATTCGAACCTTGGAATTGGTTCATGTA
CTTGAGACATCTGGTGGTAGTGTTTACTCGATAACTGTCACCAATCACCACATTGTATGT
GGCACCTACGAAAACTGTATTCATGTATGGGACATCCGAACTCATGAACAGCTAGCAACC
TTGACAGGACATATCGGTACAGTTTATGCAGTAGTAGCCATGAGCACTCCAGACCAAACC
AAAGTGTTCAGTGCATCTTATGATAGGTCTATAAGGATATACAAACAATCACAAAAAAAT
ACCAAAGAAAGGCGTACACTTAACTTAAATAAATAG
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[82-133] 6.6E-10 - T[134-350] 9.1E-48 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[87-338] 2.29E-59 |
| SMART |
WD40_repeat (IPR001680) - T[93-130] 1.2E-8 - T[134-171] 1.4E-7 - T[174-210] 0.31 - T[215-251] 51.0 - T[254-291] 0.16 - T[294-335] 0.0039 |
| Pfam |
WD40_repeat (IPR001680) - T[95-130] 5.6E-7 - T[136-171] 4.0E-6 - T[227-251] 0.25 - T[297-334] 0.0023 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[100-139] 11.277 - T[141-180] 12.915 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[100-344] 36.675 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[117-131] . - T[158-172] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[117-131] 6.6E-7 - T[158-172] 6.6E-7 - T[278-292] 6.6E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBXW7_HUMAN | 30.165 % | 109 | 3.58E-26 |
| FBW1B_HUMAN | 29.87 % | 101 | 1.4E-23 |
| TRAF7_HUMAN | 70.27 % | 439 | 1.69E-150 |