- Transcript 'KH2012:KH.C9.580.v1....' >
- Transcript 'Harore.CG.MTP2014.S4...' >
- Transcript 'Moocci.CG.ELv1_2.S65...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S656146.g31058.01.t
Possible name(s)
C1QTNF7; COL6A5; EDA
Gene model
Location
S656146 [81,453 / 86,636]
Amino acid sequence
Length: 381
>Moocci.CG.ELv1_2.S656146.g31058.01.p
MDEETKKRLSHNMIDLGNSCEDEMLKETYKETKIRNDLNSKSIWQISELRQNFHELQAEL
DKTSGIETLVLAEEGYAQVVQENQNNKIKDHEKLTFIYDDKSPLEKQKMATPRARREAPE
TPDDLTKIKRDKRGKRQGRTKKPRLNCRKGRCNHKVMRGPPGRDGRDGRDGSKGDPGPPG
LQGPPGKSIRGPRGLEGPQGIQGPPGQKGPRGLPGKPQTFDVIHVHGDGSSRVTASSNGI
LTHWTEDGGSSNSNFILFPHNGTLQVLSGGIYFIYSQILAVNSGTTYTSHEMKVNGNTFL
RCKRSSKVSTCFTSDLFTAGVRKLNKNDNIYVVMTYPETQVDMLKDDSFFGLVKWSDDGN
HIKVITRKCVYLLLHFNSNIR
Nucleotide sequence
Length: 1,146
>Moocci.CG.ELv1_2.S656146.g31058.01.t
ATGGATGAAGAAACGAAAAAAAGATTAAGCCACAACATGATTGATTTGGGTAATTCTTGT
GAAGATGAAATGCTTAAAGAAACCTATAAAGAAACAAAAATTAGAAATGACTTGAACTCA
AAATCAATTTGGCAAATATCGGAACTGCGACAAAACTTTCATGAATTACAAGCTGAATTA
GATAAGACATCAGGAATTGAAACACTGGTTTTAGCAGAAGAAGGATATGCTCAAGTAGTT
CAAGAAAATCAAAATAATAAAATTAAAGATCATGAAAAATTGACATTCATTTATGATGAT
AAAAGTCCACTAGAAAAACAAAAAATGGCGACACCTAGAGCAAGGCGGGAAGCACCAGAA
ACTCCTGATGATTTAACTAAAATTAAAAGAGATAAAAGAGGGAAACGCCAAGGGCGAACC
AAAAAGCCCAGGCTTAACTGCCGTAAAGGCCGATGCAATCATAAAGTTATGCGTGGACCA
CCTGGTAGAGATGGCAGAGATGGAAGGGATGGATCCAAAGGAGACCCAGGACCCCCTGGT
TTACAAGGTCCACCAGGGAAATCTATTAGAGGACCACGTGGATTAGAAGGTCCCCAGGGT
ATTCAAGGTCCTCCTGGTCAAAAAGGTCCCAGAGGTTTACCTGGAAAGCCGCAAACATTT
GATGTTATTCATGTTCATGGAGATGGATCCTCTAGAGTTACTGCATCTTCAAATGGAATA
TTAACACATTGGACAGAAGATGGTGGCAGTTCTAATTCAAATTTTATTTTATTTCCACAC
AATGGAACACTTCAAGTTTTATCTGGAGGGATTTATTTTATTTATAGCCAGATATTAGCT
GTAAATAGTGGTACCACATATACAAGTCACGAAATGAAAGTAAATGGGAATACGTTTTTG
AGATGTAAAAGGAGTTCAAAGGTTAGCACCTGTTTTACGTCAGATTTATTCACTGCTGGT
GTACGCAAACTAAACAAGAACGATAACATCTACGTGGTCATGACATATCCAGAAACACAA
GTGGATATGCTTAAAGATGACTCGTTCTTTGGTCTTGTAAAATGGTCAGATGACGGAAAT
CATATCAAAGTCATAACACGAAAATGCGTTTACCTACTTCTTCATTTTAACAGCAATATT
AGATAG
| Pfam |
Collagen (IPR008160) - T[159-217] 8.3E-8 |
| Gene3D |
Tumour_necrosis_fac-like_dom (IPR008983) - T[216-354] 3.7E-25 |
| ProSiteProfiles |
TNF_dom (IPR006052) - T[222-354] 10.677 |
| SUPERFAMILY |
Tumour_necrosis_fac-like_dom (IPR008983) - T[242-356] 2.71E-21 |
| Pfam |
TNF_dom (IPR006052) - T[243-354] 2.9E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|