- Transcript 'Moocci.CG.ELv1_2.S65...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S654947.g30906.01.t
Possible name(s)
SMTN; SMTNL1; SMTNL2
Gene model
Location
S654947 [13,661 / 19,575]
Amino acid sequence
Length: 666
>Moocci.CG.ELv1_2.S654947.g30906.01.p
MSRVNRSEYDSSIPNTPASEVAPSTFGSKETKQPVEEVLIKEENAGSLQTEISVSLNNVN
VDALNFQSKVSTPDSPIPSDSSSKVKTEEEEVITEDYNKEKDNVKVKNTDTKSHSSDDEV
TTSAAVNESNEIESSEKAKKGLEELVQDDVSHTEGKDKPVAEFENKETEPCKENDIKSSD
TKKEKSKKVLEKEGTEKSVKIQKEESGDKKTQINEDDKENPVAKPRRRRIRSNIDDTSNT
LPEIKEVSTEHIEDLSGKKTSRKRTEEKSRKKSERIEEKTEKSSKKEKSVPEIKVQETKD
EKKEAEKPQEDQEMHFTVENVDQCKDEEILERMLENATVFEDRKVIRRALRTLRRVKNEE
AIAGKLSMLKSGRRESKTRDDIMITEYNRSVSAGDGDSKRSISTHVKKTEIVSPGINHNK
LLSTSVSATQRTKMTTREPKKIGSIFDREDDESSKPRTGGSKYELEKRVAERRHDIQRIR
SMPSSSSSKDARKAFVAKLESQSPKPSGNKKIGRSPTFVVPNAKNVKQMLLKWLQAKTRG
YAHVDVTNFSSSWANGMAFCALVHHFFPDSFDYDKLDPKNRAENFTLAFNTAEKLANADQ
LLDVEDMLIMGNRPDSKCVFTYCQSLYNKLRKFEAPLKPLKLANPTPPVKEMEEMSFGAA
PESEDL
Nucleotide sequence
Length: 2,454
>Moocci.CG.ELv1_2.S654947.g30906.01.t
ATGTCGCGTGTTAATAGAAGTGAATATGACAGTTCGATTCCAAATACTCCTGCTTCTGAA
GTCGCACCATCCACCTTTGGATCAAAAGAAACTAAACAACCAGTAGAAGAGGTTTTAATA
AAAGAGGAAAACGCTGGTTCTTTACAAACAGAAATAAGCGTTTCTCTCAATAATGTTAAC
GTGGATGCTTTAAATTTCCAAAGCAAAGTATCCACGCCAGATTCCCCGATTCCTAGCGAC
AGTTCATCTAAGGTTAAAACTGAAGAAGAGGAAGTAATAACTGAAGACTATAATAAAGAA
AAAGATAATGTAAAAGTAAAAAACACAGATACAAAGAGTCACAGTTCAGACGATGAAGTC
ACAACGTCCGCAGCAGTCAATGAAAGCAATGAAATTGAATCCAGTGAGAAAGCTAAAAAG
GGATTAGAAGAATTAGTCCAAGACGACGTAAGCCACACAGAAGGTAAAGACAAACCTGTC
GCGGAATTTGAGAACAAAGAAACTGAGCCGTGTAAAGAAAATGACATAAAGTCTAGTGAC
ACCAAAAAAGAAAAATCTAAAAAGGTTTTGGAAAAAGAAGGCACTGAAAAATCAGTTAAG
ATACAAAAAGAGGAGAGTGGTGATAAAAAGACGCAGATTAATGAAGACGACAAAGAAAAT
CCAGTGGCTAAACCAAGACGAAGACGAATAAGATCTAATATAGACGATACTTCAAATACC
CTACCTGAGATAAAAGAAGTTTCGACGGAGCACATAGAAGATTTGTCTGGAAAGAAAACT
TCCAGAAAACGAACGGAAGAAAAATCAAGGAAAAAATCTGAAAGGATTGAAGAAAAAACA
GAAAAGTCTTCAAAAAAAGAGAAGTCAGTACCCGAAATTAAAGTGCAGGAAACGAAGGAC
GAGAAAAAAGAAGCGGAAAAACCTCAAGAGGACCAAGAAATGCATTTTACAGTAGAAAAC
GTTGACCAGTGTAAAGATGAGGAAATTTTGGAAAGAATGCTTGAAAATGCAACAGTTTTT
GAAGATAGAAAAGTAATCAGGAGAGCTCTTCGTACTTTGCGAAGAGTTAAGAATGAAGAA
GCAATAGCTGGTAAATTATCTATGCTTAAATCTGGTCGTCGTGAATCTAAGACTCGAGAT
GATATCATGATAACGGAATATAACCGAAGTGTTTCGGCTGGGGATGGCGACTCCAAGCGA
TCCATCAGCACCCATGTGAAAAAAACTGAAATAGTGTCGCCAGGTATTAATCATAACAAG
TTGTTATCGACTTCTGTATCTGCGACACAGCGAACAAAAATGACAACGCGAGAACCTAAA
AAGATTGGAAGCATTTTTGACCGAGAAGACGATGAAAGTTCTAAACCAAGAACAGGTGGA
TCCAAATATGAACTGGAAAAACGAGTGGCTGAAAGGCGTCACGACATTCAACGCATTAGG
TCAATGCCATCATCATCATCTTCGAAAGACGCAAGAAAAGCTTTTGTAGCTAAGTTGGAA
TCGCAATCCCCTAAACCATCTGGGAATAAGAAAATTGGTAGAAGTCCAACATTTGTTGTT
CCAAATGCCAAAAACGTAAAGCAAATGTTACTGAAGTGGCTTCAAGCAAAAACCAGAGGA
TATGCACATGTCGACGTTACTAACTTCTCAAGTAGTTGGGCAAACGGTATGGCTTTCTGC
GCACTTGTACACCACTTTTTCCCAGACTCTTTCGATTACGATAAACTGGATCCAAAGAAT
CGCGCTGAAAATTTTACCCTCGCATTCAACACAGCAGAAAAACTAGCAAATGCGGATCAA
CTGTTAGATGTTGAAGATATGCTTATCATGGGCAATCGACCGGATTCAAAATGCGTTTTT
ACGTATTGCCAGTCCTTGTATAATAAATTGCGGAAATTCGAAGCACCGTTGAAACCCCTT
AAATTAGCAAACCCGACACCCCCTGTTAAGGAAATGGAGGAGATGAGTTTTGGCGCAGCT
CCAGAAAGTGAAGACTTATAATATGAAAAATTCGAATTCTTTTTTCATTTATACAAATTT
GCGCGTTTAAAAAAGATTAAACTTAATAAATTATGTATAGGCTATACATATTAACATTTA
CAATGTTAACGCAAATATTTTACTTCTCGTCTTTATTAATAATCCATAAATCATAATTTA
TATGTAGTCTATAAATGAACTACCTAATAATTTTAATATTTTATTGCACATGCATTTATC
ACATTGATAACATATATTTTAATTTTTAATTAGAGTAGAGTATTTGTTTTGCTTTGCTTT
ATTATTTTATGACATTACTTCGCATACCGATCAGTGTGTATTTTAGATTTTATTTTTATT
ATTTTTTTTTGCAAATTGTGTGAACTTTATTGCTCGTGGTGAATTTAACATGACCGTTAA
TGCTGTTGGTTATCATATATAGGACGATGACAATAGAGAATTTAAAGCATAAAA
| Pfam |
SMTN (IPR022189) - T[315-355] 2.5E-9 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[519-632] 1.31E-32 |
| Gene3D |
CH_dom_sf (IPR036872) - T[522-635] 6.1E-37 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[524-608] 13.841 |
| SMART |
CH-domain (IPR001715) - T[526-626] 2.0E-21 |
| Pfam |
CH-domain (IPR001715) - T[526-631] 2.9E-20 |
| CDD |
CH-domain (IPR001715) - T[527-631] 2.58084E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMTN_HUMAN | 43.44 % | 260 | 9.25E-76 |
| SMTL2_HUMAN | 52.047 % | 199 | 6.23E-57 |
| SMTL1_HUMAN | 54.676 % | 167 | 2.09E-45 |
