Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 898

>Moocci.CG.ELv1_2.S653808.g30764.02.p
MEQQQQYDGMPVSESDYMQQEDMWDREGLLDPAWERQQRKTFTAWCNSHLRKAGTQIEDI
EKDFRNGLKLMLLLEVISGERLPKPDRGKMRFHKIANVNKALEFIASKGVKLVSIGAEEI
VDGNPKMTLGMIWTIILRFAIQDISVEESSAKEGLLLWCQRKTAPYKNVNVQNFHMSWKD
GLAFCALIHRHRPDLIDYNKLKKDDPLTNLQTAFDVADKHLDIPKMLDAEDIIDMAKPDE
RSIMTYVAAFYHAFSGNDKTETAANRICKVLNVNKENEALMDEYETLASDLLKWINSVRP
WLENREADNDINGVQSQLDAFRDYRRNQKPPKSEEKGTLEATFNTLQTKLRLSNRPAFMP
SEGKLVSDISNAWKGLEGAEKGYEEWLLSELRRLERLEHLAKKFQHKAKIHEAWAEGKED
FLKSEDYKNCNLNEVKALIKKHQAFESDLAAHQDRVEQIAAIAQELNDLDYCRINEINPV
CQKICDEWDRLGDATNKRKTSLDNMEKYLEAIEQLHLEFAKRAAPFNNWMDSAMEDLEDM
FIVHSIEEIQGLIGAHEQFKATLPEAEKEKNQILQLDAEAQKLMRQYNIAAEMENVYTAL
TPEEVNLKYGQVKEYVPKRDRSLQTELAKQQNHERLRTQFAALANKVGPWIQAKTEEISH
MAMNIQGSLENNLANLKQYMENVNMYGSNIEQLEEVHKEMQECLIFDNKHTFFTMEHIRV
GWEHLKTTITRTINEIDNQILLRDAKGITEEQMNEFRQSFNHFDRDETGQLNCDEMNGCL
TSLGYEVDLNTPKGESEFQRIMAVVDPNNTGMVTFQSFIDFMTRESIDRDSAEQVITSFR
ILAGDKAYITPDELRRELPPDQAEYCIGRMSKYTGPDAPPDALDYTSFSTALYGESDL

Nucleotide sequence

Length: 3,731

>Moocci.CG.ELv1_2.S653808.g30764.02.t
TTTACATTTATCCAGGGGCATAAGTAGTCGCCTAGCGACATAGGTTGTAAATAGAATTAA
AGAAATTTAAACTGTAAAAGATTTCGTCAATTTTAACTTTTTGTTGGGCACCGAAATCTA
TTAAATATGGAGCAACAACAGCAATACGATGGTATGCCGGTGAGCGAAAGCGATTACATG
CAACAGGAAGATATGTGGGACAGGGAAGGACTGTTGGACCCAGCTTGGGAAAGACAGCAA
CGAAAGACTTTTACTGCCTGGTGTAACTCACATTTAAGAAAAGCTGGTACTCAGATAGAA
GACATTGAAAAAGACTTTAGAAATGGTCTTAAACTTATGCTGCTGTTGGAGGTCATATCT
GGTGAACGTCTTCCAAAACCAGACAGAGGCAAAATGCGTTTTCATAAAATAGCAAATGTA
AATAAAGCCCTTGAATTTATAGCATCCAAGGGCGTAAAATTGGTGTCTATTGGTGCTGAA
GAAATTGTTGATGGAAACCCAAAGATGACTCTTGGTATGATTTGGACCATCATCTTGCGA
TTTGCCATCCAAGATATTTCTGTTGAAGAGTCTTCTGCCAAAGAAGGTTTACTCTTGTGG
TGCCAACGCAAAACTGCTCCGTACAAGAATGTAAATGTACAGAATTTCCATATGAGTTGG
AAAGATGGTCTTGCTTTCTGCGCTCTTATTCACAGACATAGACCAGATCTCATTGATTAC
AATAAGCTTAAGAAGGACGACCCCCTGACAAATTTACAAACTGCTTTCGACGTTGCTGAT
AAACATCTTGATATTCCAAAAATGTTGGACGCAGAAGACATCATTGATATGGCTAAACCT
GACGAGCGTTCTATCATGACGTATGTTGCTGCATTTTATCATGCTTTCTCGGGCAATGAT
AAGACTGAAACTGCTGCTAATCGTATATGCAAAGTTCTTAATGTAAATAAAGAAAATGAG
GCGTTAATGGATGAATATGAAACATTAGCTTCAGATTTGTTGAAATGGATCAACAGTGTC
CGACCATGGCTTGAAAACCGTGAGGCCGATAATGATATTAATGGTGTTCAATCTCAACTT
GATGCATTTAGAGACTACCGTCGTAATCAAAAACCCCCTAAGTCTGAAGAAAAAGGTACA
CTGGAAGCTACATTTAACACTCTTCAAACAAAACTTAGGCTTAGTAACAGGCCAGCATTT
ATGCCATCTGAAGGAAAATTAGTGTCCGATATTTCTAATGCCTGGAAGGGTCTGGAGGGT
GCTGAAAAAGGTTATGAAGAATGGCTCCTCTCAGAACTACGAAGGTTAGAAAGACTTGAA
CATCTTGCCAAAAAATTCCAACATAAAGCCAAAATTCATGAAGCCTGGGCTGAAGGAAAG
GAAGATTTTCTTAAATCTGAAGATTACAAGAATTGTAACCTTAATGAAGTTAAGGCTTTG
ATTAAGAAACACCAGGCATTTGAAAGTGACTTGGCAGCCCACCAGGACAGAGTTGAACAA
ATTGCAGCAATTGCCCAAGAATTAAATGATTTGGATTACTGTAGAATTAACGAAATTAAC
CCAGTTTGCCAAAAAATTTGCGATGAATGGGATCGATTGGGAGATGCAACAAATAAACGA
AAGACTTCTTTGGATAACATGGAGAAATACCTTGAAGCAATTGAACAACTTCATCTAGAG
TTTGCAAAGAGAGCCGCACCATTTAACAATTGGATGGACAGTGCAATGGAAGATTTGGAA
GATATGTTCATTGTTCACTCCATTGAAGAAATTCAGGGATTGATTGGTGCTCATGAACAA
TTTAAAGCCACTCTTCCTGAAGCTGAAAAAGAAAAAAATCAAATCTTACAACTTGATGCA
GAAGCACAAAAGTTAATGAGACAATACAACATTGCAGCGGAGATGGAGAATGTATACACC
GCTTTGACACCAGAGGAAGTAAATTTAAAATATGGTCAAGTCAAAGAATACGTCCCAAAA
CGAGATAGATCTTTACAAACTGAACTTGCAAAACAACAAAATCATGAGCGTCTTCGAACA
CAATTTGCAGCACTTGCTAACAAAGTTGGGCCATGGATTCAAGCCAAAACTGAGGAAATT
TCTCACATGGCAATGAACATCCAGGGATCACTTGAAAACAACCTTGCTAATTTGAAGCAA
TACATGGAAAATGTTAATATGTATGGATCCAACATTGAACAGTTAGAAGAAGTACACAAG
GAAATGCAAGAATGTCTTATTTTTGATAACAAACACACCTTTTTCACAATGGAACATATC
CGTGTGGGTTGGGAACATCTCAAGACAACCATCACAAGAACAATTAATGAAATTGATAAC
CAGATACTCCTACGTGATGCCAAGGGCATTACAGAGGAACAAATGAATGAATTTAGACAA
TCCTTTAACCACTTTGATCGGGATGAAACTGGTCAACTGAATTGTGATGAAATGAATGGC
TGCCTTACATCACTAGGTTATGAGGTAGACCTCAATACTCCAAAGGGCGAGAGTGAATTT
CAGCGTATTATGGCAGTTGTTGACCCCAACAACACCGGCATGGTGACCTTCCAAAGTTTT
ATTGATTTCATGACAAGGGAAAGCATTGATCGTGATTCTGCTGAACAAGTAATCACATCC
TTCCGTATTTTGGCCGGAGATAAGGCATACATTACGCCCGACGAACTTCGTCGTGAACTC
CCCCCTGACCAAGCAGAATACTGTATCGGCAGGATGTCTAAATACACCGGTCCTGACGCC
CCACCGGATGCTTTGGATTATACTAGTTTCTCTACGGCTCTTTATGGAGAATCAGATCTT
TAAATATTTTAATAAAATATAAAAAAAACTGTATCTAAATAAACTAGTTACGGTATGGAA
ACAATATGTTTATTTCTACAACAACAGCTCTTGTGCATTTTGAAGTGAAATCTGGTTAAC
CGCTAAGGAAATATGAATATTGCACCGCTCAACACAATCAACCAATCATGCGTTTGCATT
TTTCACTTGCTTTACTTGCAATTTATGTGTCATGTGATTATTGCTATGGTAACATGCGAT
AGTGACTTAATGATTGTTTTGTTTATTTTATTGCTATTAATTAAATATGAAATGATTTAA
CCACTGCATTCGATCAATAGTACAGGCCAATTATGGTACTAATTACTTGTGCATAACTTT
TATTTTGTATCAAATTTTTTATCCACATTTAAATATCATGTCAATTATTTTATTATTTTG
TTTATTATTATGTAGTATACATTAAATATTATCTGTAATTTTATATTTAGTTACCGTTAC
CACGGAGTATTAAATAGTACATACATAAATCGGTGGTTTTATATATTCTTGTTTGCCAAT
TCACACAGCATATGTATCTCTATGCTTACATTGTGACACCCAGTTTTGTTTTTAACTCCG
TTTATCAATGAACTTTTATGTAATTACTGTATATAGCCCAAATCTTCCATAACACCTGTA
ATTAAGAATTTTAGGGTGTAAATTAAAATCAAATTTGTATTGTTTTTTTGTGCTTTGTAA
TAAAAGTGTTGGTATTATCCCATTGTTTTTATTGTGATTGTTTTTACTTGTAAATATCCA
TCATATCTGCATAATATCATATTGAATTAGACAACCAGTTTACGAATGTAATATAGCATA
TTGTTACCTAACATCGTGCCTCAGTAGTAACCTTATACAATTAATATATAATACAAAATA
TTTCAGCAGTA

InterProScan

PANTHER	ACTN4 (IPR029637) - T[3-898] 0.0
Gene3D	CH_dom_sf (IPR036872) - T[18-146] 3.3E-45 - T[147-264] 2.8E-52
SUPERFAMILY	CH_dom_sf (IPR036872) - T[24-254] 6.61E-88
ProSiteProfiles	CH-domain (IPR001715) - T[36-140] 17.404 - T[149-252] 17.489
Pfam	CH-domain (IPR001715) - T[37-140] 3.9E-24 - T[150-255] 4.2E-28
ProSitePatterns	Actinin_actin-bd_CS (IPR001589) - T[38-47] . - T[112-136] .
SMART	CH-domain (IPR001715) - T[38-138] 1.4E-24 - T[151-250] 8.2E-26
CDD	CH-domain (IPR001715) - T[38-140] 4.20654E-23 - T[150-254] 1.13461E-26
Pfam	Spectrin_repeat (IPR002017) - T[280-388] 9.7E-12 - T[400-503] 1.5E-19 - T[515-624] 1.5E-13 - T[636-735] 4.6E-9
SMART	Spectrin/alpha-actinin (IPR018159) - T[282-388] 0.69 - T[402-503] 1.1E-20 - T[517-624] 6.8E-8
SUPERFAMILY	EF-hand-dom_pair (IPR011992) - T[742-860] 2.48E-20
ProSiteProfiles	EF_hand_dom (IPR002048) - T[751-786] 12.338 - T[793-828] 10.385
CDD	EF_hand_dom (IPR002048) - T[755-823] 5.86987E-11
SMART	EF_hand_dom (IPR002048) - T[755-783] 0.46 - T[797-825] 0.0027
ProSitePatterns	EF_Hand_1_Ca_BS (IPR018247) - T[764-776] .
Pfam	EF-hand_Ca_insen (IPR014837) - T[828-894] 1.7E-25