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  1. Transcript 'Cisavi.CG.ENS81.R16....'
  2. Transcript 'KH2012:KH.L149.21.v2...'
  3. Transcript 'KH2012:KH.C5.25.v1.A...'
  4. Transcript 'Moocci.CG.ELv1_2.S57...'
  5. Transcript 'Moocci.CG.ELv1_2.S65...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S653808.g30764.02.t

Possible name(s)

ACTN1; ACTN2; ACTN4

Location

S653808 [26,466 / 35,357]

Sequences

Amino acid sequence

Length: 898

>Moocci.CG.ELv1_2.S653808.g30764.02.p
MEQQQQYDGMPVSESDYMQQEDMWDREGLLDPAWERQQRKTFTAWCNSHLRKAGTQIEDI
EKDFRNGLKLMLLLEVISGERLPKPDRGKMRFHKIANVNKALEFIASKGVKLVSIGAEEI
VDGNPKMTLGMIWTIILRFAIQDISVEESSAKEGLLLWCQRKTAPYKNVNVQNFHMSWKD
GLAFCALIHRHRPDLIDYNKLKKDDPLTNLQTAFDVADKHLDIPKMLDAEDIIDMAKPDE
RSIMTYVAAFYHAFSGNDKTETAANRICKVLNVNKENEALMDEYETLASDLLKWINSVRP
WLENREADNDINGVQSQLDAFRDYRRNQKPPKSEEKGTLEATFNTLQTKLRLSNRPAFMP
SEGKLVSDISNAWKGLEGAEKGYEEWLLSELRRLERLEHLAKKFQHKAKIHEAWAEGKED
FLKSEDYKNCNLNEVKALIKKHQAFESDLAAHQDRVEQIAAIAQELNDLDYCRINEINPV
CQKICDEWDRLGDATNKRKTSLDNMEKYLEAIEQLHLEFAKRAAPFNNWMDSAMEDLEDM
FIVHSIEEIQGLIGAHEQFKATLPEAEKEKNQILQLDAEAQKLMRQYNIAAEMENVYTAL
TPEEVNLKYGQVKEYVPKRDRSLQTELAKQQNHERLRTQFAALANKVGPWIQAKTEEISH
MAMNIQGSLENNLANLKQYMENVNMYGSNIEQLEEVHKEMQECLIFDNKHTFFTMEHIRV
GWEHLKTTITRTINEIDNQILLRDAKGITEEQMNEFRQSFNHFDRDETGQLNCDEMNGCL
TSLGYEVDLNTPKGESEFQRIMAVVDPNNTGMVTFQSFIDFMTRESIDRDSAEQVITSFR
ILAGDKAYITPDELRRELPPDQAEYCIGRMSKYTGPDAPPDALDYTSFSTALYGESDL

Nucleotide sequence

Length: 3,731

>Moocci.CG.ELv1_2.S653808.g30764.02.t
TTTACATTTATCCAGGGGCATAAGTAGTCGCCTAGCGACATAGGTTGTAAATAGAATTAA
AGAAATTTAAACTGTAAAAGATTTCGTCAATTTTAACTTTTTGTTGGGCACCGAAATCTA
TTAAATATGGAGCAACAACAGCAATACGATGGTATGCCGGTGAGCGAAAGCGATTACATG
CAACAGGAAGATATGTGGGACAGGGAAGGACTGTTGGACCCAGCTTGGGAAAGACAGCAA
CGAAAGACTTTTACTGCCTGGTGTAACTCACATTTAAGAAAAGCTGGTACTCAGATAGAA
GACATTGAAAAAGACTTTAGAAATGGTCTTAAACTTATGCTGCTGTTGGAGGTCATATCT
GGTGAACGTCTTCCAAAACCAGACAGAGGCAAAATGCGTTTTCATAAAATAGCAAATGTA
AATAAAGCCCTTGAATTTATAGCATCCAAGGGCGTAAAATTGGTGTCTATTGGTGCTGAA
GAAATTGTTGATGGAAACCCAAAGATGACTCTTGGTATGATTTGGACCATCATCTTGCGA
TTTGCCATCCAAGATATTTCTGTTGAAGAGTCTTCTGCCAAAGAAGGTTTACTCTTGTGG
TGCCAACGCAAAACTGCTCCGTACAAGAATGTAAATGTACAGAATTTCCATATGAGTTGG
AAAGATGGTCTTGCTTTCTGCGCTCTTATTCACAGACATAGACCAGATCTCATTGATTAC
AATAAGCTTAAGAAGGACGACCCCCTGACAAATTTACAAACTGCTTTCGACGTTGCTGAT
AAACATCTTGATATTCCAAAAATGTTGGACGCAGAAGACATCATTGATATGGCTAAACCT
GACGAGCGTTCTATCATGACGTATGTTGCTGCATTTTATCATGCTTTCTCGGGCAATGAT
AAGACTGAAACTGCTGCTAATCGTATATGCAAAGTTCTTAATGTAAATAAAGAAAATGAG
GCGTTAATGGATGAATATGAAACATTAGCTTCAGATTTGTTGAAATGGATCAACAGTGTC
CGACCATGGCTTGAAAACCGTGAGGCCGATAATGATATTAATGGTGTTCAATCTCAACTT
GATGCATTTAGAGACTACCGTCGTAATCAAAAACCCCCTAAGTCTGAAGAAAAAGGTACA
CTGGAAGCTACATTTAACACTCTTCAAACAAAACTTAGGCTTAGTAACAGGCCAGCATTT
ATGCCATCTGAAGGAAAATTAGTGTCCGATATTTCTAATGCCTGGAAGGGTCTGGAGGGT
GCTGAAAAAGGTTATGAAGAATGGCTCCTCTCAGAACTACGAAGGTTAGAAAGACTTGAA
CATCTTGCCAAAAAATTCCAACATAAAGCCAAAATTCATGAAGCCTGGGCTGAAGGAAAG
GAAGATTTTCTTAAATCTGAAGATTACAAGAATTGTAACCTTAATGAAGTTAAGGCTTTG
ATTAAGAAACACCAGGCATTTGAAAGTGACTTGGCAGCCCACCAGGACAGAGTTGAACAA
ATTGCAGCAATTGCCCAAGAATTAAATGATTTGGATTACTGTAGAATTAACGAAATTAAC
CCAGTTTGCCAAAAAATTTGCGATGAATGGGATCGATTGGGAGATGCAACAAATAAACGA
AAGACTTCTTTGGATAACATGGAGAAATACCTTGAAGCAATTGAACAACTTCATCTAGAG
TTTGCAAAGAGAGCCGCACCATTTAACAATTGGATGGACAGTGCAATGGAAGATTTGGAA
GATATGTTCATTGTTCACTCCATTGAAGAAATTCAGGGATTGATTGGTGCTCATGAACAA
TTTAAAGCCACTCTTCCTGAAGCTGAAAAAGAAAAAAATCAAATCTTACAACTTGATGCA
GAAGCACAAAAGTTAATGAGACAATACAACATTGCAGCGGAGATGGAGAATGTATACACC
GCTTTGACACCAGAGGAAGTAAATTTAAAATATGGTCAAGTCAAAGAATACGTCCCAAAA
CGAGATAGATCTTTACAAACTGAACTTGCAAAACAACAAAATCATGAGCGTCTTCGAACA
CAATTTGCAGCACTTGCTAACAAAGTTGGGCCATGGATTCAAGCCAAAACTGAGGAAATT
TCTCACATGGCAATGAACATCCAGGGATCACTTGAAAACAACCTTGCTAATTTGAAGCAA
TACATGGAAAATGTTAATATGTATGGATCCAACATTGAACAGTTAGAAGAAGTACACAAG
GAAATGCAAGAATGTCTTATTTTTGATAACAAACACACCTTTTTCACAATGGAACATATC
CGTGTGGGTTGGGAACATCTCAAGACAACCATCACAAGAACAATTAATGAAATTGATAAC
CAGATACTCCTACGTGATGCCAAGGGCATTACAGAGGAACAAATGAATGAATTTAGACAA
TCCTTTAACCACTTTGATCGGGATGAAACTGGTCAACTGAATTGTGATGAAATGAATGGC
TGCCTTACATCACTAGGTTATGAGGTAGACCTCAATACTCCAAAGGGCGAGAGTGAATTT
CAGCGTATTATGGCAGTTGTTGACCCCAACAACACCGGCATGGTGACCTTCCAAAGTTTT
ATTGATTTCATGACAAGGGAAAGCATTGATCGTGATTCTGCTGAACAAGTAATCACATCC
TTCCGTATTTTGGCCGGAGATAAGGCATACATTACGCCCGACGAACTTCGTCGTGAACTC
CCCCCTGACCAAGCAGAATACTGTATCGGCAGGATGTCTAAATACACCGGTCCTGACGCC
CCACCGGATGCTTTGGATTATACTAGTTTCTCTACGGCTCTTTATGGAGAATCAGATCTT
TAAATATTTTAATAAAATATAAAAAAAACTGTATCTAAATAAACTAGTTACGGTATGGAA
ACAATATGTTTATTTCTACAACAACAGCTCTTGTGCATTTTGAAGTGAAATCTGGTTAAC
CGCTAAGGAAATATGAATATTGCACCGCTCAACACAATCAACCAATCATGCGTTTGCATT
TTTCACTTGCTTTACTTGCAATTTATGTGTCATGTGATTATTGCTATGGTAACATGCGAT
AGTGACTTAATGATTGTTTTGTTTATTTTATTGCTATTAATTAAATATGAAATGATTTAA
CCACTGCATTCGATCAATAGTACAGGCCAATTATGGTACTAATTACTTGTGCATAACTTT
TATTTTGTATCAAATTTTTTATCCACATTTAAATATCATGTCAATTATTTTATTATTTTG
TTTATTATTATGTAGTATACATTAAATATTATCTGTAATTTTATATTTAGTTACCGTTAC
CACGGAGTATTAAATAGTACATACATAAATCGGTGGTTTTATATATTCTTGTTTGCCAAT
TCACACAGCATATGTATCTCTATGCTTACATTGTGACACCCAGTTTTGTTTTTAACTCCG
TTTATCAATGAACTTTTATGTAATTACTGTATATAGCCCAAATCTTCCATAACACCTGTA
ATTAAGAATTTTAGGGTGTAAATTAAAATCAAATTTGTATTGTTTTTTTGTGCTTTGTAA
TAAAAGTGTTGGTATTATCCCATTGTTTTTATTGTGATTGTTTTTACTTGTAAATATCCA
TCATATCTGCATAATATCATATTGAATTAGACAACCAGTTTACGAATGTAATATAGCATA
TTGTTACCTAACATCGTGCCTCAGTAGTAACCTTATACAATTAATATATAATACAAAATA
TTTCAGCAGTA

InterProScan

PANTHER
ACTN4 (IPR029637) - T[3-898] 0.0
Gene3D
CH_dom_sf (IPR036872) - T[18-146] 3.3E-45 - T[147-264] 2.8E-52
SUPERFAMILY
CH_dom_sf (IPR036872) - T[24-254] 6.61E-88
ProSiteProfiles
CH-domain (IPR001715) - T[36-140] 17.404 - T[149-252] 17.489
Pfam
CH-domain (IPR001715) - T[37-140] 3.9E-24 - T[150-255] 4.2E-28
ProSitePatterns
Actinin_actin-bd_CS (IPR001589) - T[38-47] . - T[112-136] .
SMART
CH-domain (IPR001715) - T[38-138] 1.4E-24 - T[151-250] 8.2E-26
CDD
CH-domain (IPR001715) - T[38-140] 4.20654E-23 - T[150-254] 1.13461E-26
Pfam
Spectrin_repeat (IPR002017) - T[280-388] 9.7E-12 - T[400-503] 1.5E-19 - T[515-624] 1.5E-13 - T[636-735] 4.6E-9
SMART
Spectrin/alpha-actinin (IPR018159) - T[282-388] 0.69 - T[402-503] 1.1E-20 - T[517-624] 6.8E-8
SUPERFAMILY
EF-hand-dom_pair (IPR011992) - T[742-860] 2.48E-20
ProSiteProfiles
EF_hand_dom (IPR002048) - T[751-786] 12.338 - T[793-828] 10.385
CDD
EF_hand_dom (IPR002048) - T[755-823] 5.86987E-11
SMART
EF_hand_dom (IPR002048) - T[755-783] 0.46 - T[797-825] 0.0027
ProSitePatterns
EF_Hand_1_Ca_BS (IPR018247) - T[764-776] .
Pfam
EF-hand_Ca_insen (IPR014837) - T[828-894] 1.7E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTN2_HUMAN 69.605 % 1300 0
ACTN1_HUMAN 70.362 % 1321 0
ACTN4_HUMAN 69.875 % 1288 0