- Transcript 'Moocci.CG.ELv1_2.S65...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S652361.g30537.01.t
Possible name(s)
CDC23; CDC27; TTC6
Gene model
Location
S652361 [1,630 / 11,566]
Amino acid sequence
Length: 839
>Moocci.CG.ELv1_2.S652361.g30537.01.p
MLATAYYHSGKPRVVKSLLESQVSHYSPECKLLYAQACWDLEEYSKVECAVTGWDIVNEI
SYSASDNGITEKIHNIEAEFGDSACYALNLLGRVFLRTERRNEAELCFKASLKLNPFLWT
SFEFMCKEGNSPDPREMFNNENVPMFSGGQFFHVQSQKITPKVNEDARNNTKPLTQSNPN
VVDNIMNQENSPQSVATPTTLSAVKPNPPRSNRPNTNESSMPHRPNRPITNESSMVTPPS
TKVGFGVETSGSLLKNLQSSAIINRDATLPISPDNEFLRSTPLNDHYSEWDSSVDSLTSA
LSVRRATRSQQRITRGLLSGTAALSPLTPSFGVLPLGDTPSPDRITAMDCLDQPSLKMTT
RQTKKCPSDITSVHGKLLFSSTENNRRMSKMDETPPNPSQLINVRRSNRICANTSSSKVD
AFRDLSEEIHKTDLINGDKMLTVPVSTVQTLATQKIATGGLMTLLCELGHAYLALCNYRC
KEALHHFNNLPINQLKTAWVLSNTGRAHFELNDYKKAAEVFKELRELHPHYLQGLEIYST
TLWHLQREVELSALAHSMKDFDHLAPETWCAVGNCFSLQQDHSLAATFLHRSIQLDSNFE
YAYTLLGHELAAQDDLNGALSCFRSAIRCNKQHYNAWYGIGSIYYRQEKFNLAEIHFRKA
LSIHPQSSVLLCHIGMTEHSLKKTTAALQTLDDAVALEPRNPLGKFHRATVLLSVDRFDE
ALQEFTELKKIIPNESLVYFLLGKIYQKMGKSHLALSHFSWARDLDPKGTNNQIKEAIDK
LDIGDDDDRYEKPHALLQKVDVDDCGDATVTMEDGGLLSYIQTSHTHNTMQQSDGDESL
Nucleotide sequence
Length: 2,980
>Moocci.CG.ELv1_2.S652361.g30537.01.t
TGATATATTTTGGGACATGCTCATTACAGTTCTCATTACTAGGTCACTTATGATGAAGTT
GTTTTCAACTTTTAGGTGACCTTTAAAATGAATTAAACAAGATTTTTATATACTAGTACC
TGTAACTTATTGATATGCTACTGGTACTACATATTTTTTACCATGGCATTGGTAAATATA
TATATATATGTTATATGGATACAATTATGTATAATATAAGTTATATATTATATAAGTTAA
TCAATATACATGCATAATAAATAACAAACTGCAACAAACTAATTTCAGTTGCAACGGCGG
AGGCATTGTTTATGCTGGCTACGGCATATTATCACTCCGGCAAACCACGCGTTGTAAAGT
CGCTTTTGGAGTCACAAGTTTCGCATTACTCCCCCGAGTGCAAACTCCTGTATGCGCAGG
CATGTTGGGACCTCGAAGAATACTCGAAAGTTGAATGCGCAGTGACTGGTTGGGATATCG
TGAACGAGATTTCTTATTCTGCGAGCGACAATGGGATTACGGAAAAGATTCACAACATAG
AGGCGGAGTTTGGCGACTCTGCCTGTTACGCGCTGAACCTCCTCGGTCGAGTGTTTCTGC
GCACGGAACGCCGCAACGAAGCAGAACTCTGCTTCAAGGCCAGTCTCAAGCTGAATCCTT
TTCTTTGGACGTCATTTGAATTCATGTGCAAGGAAGGAAACTCCCCGGATCCTAGGGAAA
TGTTCAACAACGAAAATGTTCCAATGTTTTCGGGAGGACAATTCTTCCACGTGCAATCGC
AAAAAATAACCCCAAAAGTTAACGAAGATGCGCGTAATAACACAAAACCTTTGACGCAGT
CGAATCCAAATGTTGTAGACAACATAATGAATCAGGAAAATTCACCACAGTCTGTTGCCA
CGCCCACCACACTGTCCGCCGTTAAACCAAACCCACCACGATCCAATCGCCCAAACACAA
ATGAGAGCTCCATGCCACATCGACCAAACCGACCAATCACCAATGAGAGCTCTATGGTGA
CTCCACCCTCCACAAAAGTTGGCTTTGGAGTGGAAACTAGTGGTAGTTTGCTCAAAAACC
TTCAGTCTTCGGCGATAATAAACCGCGACGCCACGCTTCCTATCAGCCCGGATAATGAGT
TTTTAAGGTCTACGCCACTAAACGACCATTACAGTGAGTGGGACAGCTCAGTGGACAGTT
TGACCTCTGCCTTGTCGGTGCGTCGGGCAACGAGGTCACAGCAACGAATAACGAGGGGTT
TATTAAGCGGCACTGCTGCGCTAAGCCCCCTGACCCCAAGTTTTGGCGTCCTACCACTAG
GTGACACTCCAAGTCCTGACCGCATAACCGCTATGGATTGCCTCGACCAACCGTCACTAA
AGATGACAACTCGTCAGACGAAGAAATGTCCGAGTGACATAACGTCCGTCCATGGCAAAC
TATTGTTTTCGTCCACAGAGAATAACCGCCGCATGTCGAAGATGGACGAGACTCCCCCCA
ACCCCTCGCAACTGATCAACGTCCGTAGGAGCAACCGGATATGTGCCAACACAAGCTCGT
CAAAGGTGGATGCATTCCGCGATTTATCTGAGGAAATTCATAAAACTGATTTAATCAACG
GGGACAAAATGTTAACGGTACCGGTGAGCACTGTTCAAACCCTCGCTACACAGAAGATTG
CAACAGGGGGCCTGATGACGTTACTGTGCGAGTTGGGCCACGCTTACCTGGCGCTCTGCA
ACTACAGGTGCAAAGAGGCGCTCCACCACTTCAATAATTTACCGATAAACCAACTGAAAA
CAGCGTGGGTACTTTCCAATACCGGCCGAGCTCATTTTGAACTCAATGATTATAAAAAGG
CGGCGGAGGTATTCAAGGAGCTGCGGGAACTTCACCCCCACTACCTGCAGGGACTCGAGA
TCTACAGCACCACGCTATGGCACCTCCAACGCGAGGTTGAACTGTCGGCGCTCGCTCACA
GCATGAAAGATTTCGACCATCTTGCGCCAGAGACTTGGTGCGCGGTAGGAAATTGTTTCT
CCCTACAACAAGACCACTCTTTGGCGGCCACGTTTCTACACAGGTCGATCCAGCTTGATT
CCAACTTTGAGTATGCCTACACACTCCTCGGCCACGAGTTGGCTGCACAAGACGATCTTA
ACGGCGCCCTCTCGTGTTTTAGGAGCGCCATTCGATGCAACAAGCAGCACTACAACGCTT
GGTACGGTATCGGATCGATTTACTACAGACAGGAAAAGTTCAACCTCGCCGAGATTCACT
TTCGCAAAGCGCTGTCCATCCACCCGCAAAGCTCGGTTTTGTTGTGTCATATAGGTATGA
CTGAACATTCTCTAAAGAAAACAACAGCTGCACTTCAAACACTAGATGATGCTGTCGCTC
TGGAACCTCGTAACCCACTCGGAAAGTTTCATCGTGCAACCGTGTTGTTGTCAGTCGATC
GTTTCGATGAGGCTTTGCAGGAATTTACCGAACTGAAAAAGATTATTCCCAACGAAAGTC
TTGTTTACTTTTTGCTGGGAAAGATATACCAAAAGATGGGAAAAAGCCACTTAGCATTAA
GTCATTTCTCGTGGGCGCGAGACCTTGACCCCAAGGGCACAAACAACCAGATTAAAGAAG
CAATTGACAAATTAGACATTGGCGACGATGACGACAGATACGAGAAACCTCACGCTCTCT
TGCAAAAAGTCGACGTAGATGACTGTGGTGATGCTACAGTAACAATGGAAGACGGCGGAT
TGCTGAGTTACATTCAAACCTCACACACACATAACACCATGCAACAGAGTGACGGGGACG
AGAGTTTATAATGCAAATTATTTTTTTATTTATGGTCTTTATTTAACTGCAGTGTCTCTA
TTTCTGATACCTCCTTTGTATTTGAAACTATGACTGCGTTGCGATAAAATATTATATGAA
TTATTATTTTACTGCGTTCAAATAAACGATGAAGTTAATA
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[1-140] 5.2E-24 - T[454-530] 8.8E-23 - T[532-663] 1.1E-42 - T[664-767] 2.3E-29 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[82-126] 8.67E-16 - T[453-529] 8.67E-16 - T[566-769] 4.68E-38 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[85-118] 7.906 - T[498-531] 10.443 - T[566-599] 7.287 - T[600-633] 7.995 - T[634-667] 11.771 - T[668-701] 7.818 - T[702-735] 7.08 - T[736-769] 10.089 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[85-118] 7.408 - T[498-769] 40.554 |
| SMART |
TPR_repeat (IPR019734) - T[85-118] 0.13 - T[498-531] 0.03 - T[566-599] 0.075 - T[600-633] 0.24 - T[634-667] 4.1E-6 - T[668-701] 14.0 - T[702-735] 75.0 - T[736-769] 0.035 |
| Pfam |
TPR_repeat (IPR019734) - T[87-116] 0.13 - T[501-526] 0.0089 |
| Pfam |
TPR_1 (IPR001440) - T[635-666] 4.9E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDC23_HUMAN | 30.303 % | 120 | 2.33E-28 |
| CDC27_HUMAN | 46.337 % | 485 | 2.26E-159 |
