Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S651995.g30499.01.t

Possible name(s)

FCN3; FIBCD1; TNR

Gene model

Moocci.CG.ELv1_2.S651995.g30499

Location

S651995 [16,938 / 18,005]

Sequences

Amino acid sequence

Length: 225

>Moocci.CG.ELv1_2.S651995.g30499.01.p
CSSIGINGVSTIYTSPYESEGLRVYCDTSTDGGRWIVFQRRENGIVDFYRTWKEYVNGFG
SQNGEFWLGLETLHQLTQRSRYELLIEMEDFDGNKKWAKYSTFSIGNAESKYTLTVNGFY
GTVGDSFRLETLFIEMKDFDGKKKWAKYSTFSIGNAESKYILTLGGFTGTAGDSLSKHNG
QMFTTKDADNDIHPTTNCAEKYLGAWWYYKCHSSNLNGKYYENIT

Nucleotide sequence

Length: 675

>Moocci.CG.ELv1_2.S651995.g30499.01.t
TGTTCCAGTATTGGCATAAACGGTGTTAGCACTATCTACACTTCTCCATACGAATCAGAA
GGTCTTCGCGTTTACTGCGATACAAGTACTGATGGTGGAAGATGGATAGTGTTTCAAAGA
AGAGAAAACGGTATCGTGGACTTCTATAGAACATGGAAGGAATACGTAAATGGATTTGGG
AGCCAAAATGGAGAATTCTGGCTCGGGCTGGAAACTTTGCATCAACTGACTCAGAGATCA
AGGTATGAATTGTTAATCGAAATGGAAGATTTTGATGGCAACAAAAAATGGGCTAAATAC
AGTACCTTCAGTATTGGAAACGCTGAATCGAAATATACTCTTACTGTGAACGGTTTCTAT
GGAACAGTGGGTGATTCTTTTAGGTTGGAAACTTTGTTTATCGAAATGAAAGATTTTGAT
GGCAAGAAAAAATGGGCTAAATACAGTACCTTCAGTATTGGAAATGCTGAGTCGAAATAT
ATCCTCACACTAGGAGGTTTTACTGGAACAGCAGGCGATTCTCTTAGTAAGCACAACGGA
CAAATGTTTACTACAAAAGACGCAGATAACGACATACATCCTACTACTAATTGTGCAGAA
AAGTACTTAGGGGCTTGGTGGTATTATAAATGTCACTCTTCCAATTTGAATGGAAAATAT
TACGAAAATATAACT

InterProScan

Gene3D	Fibrinogen_a/b/g_C_1 (IPR014716) - T[1-129] 1.4E-52
ProSiteProfiles	Fibrinogen_a/b/g_C_dom (IPR002181) - T[1-225] 46.59
CDD	Fibrinogen_a/b/g_C_dom (IPR002181) - T[1-223] 4.44511E-81
SMART	Fibrinogen_a/b/g_C_dom (IPR002181) - T[1-224] 1.4E-50
SUPERFAMILY	Fibrinogen-like_C (IPR036056) - T[5-128] 4.84E-49 - T[131-222] 7.98E-35
Pfam	Fibrinogen_a/b/g_C_dom (IPR002181) - T[8-128] 7.9E-40 - T[132-222] 2.7E-27
ProSitePatterns	Fibrinogen_CS (IPR020837) - T[206-218] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
FCN1_HUMAN	40.465 %	162	6.22E-49
TENR_HUMAN	38.532 %	161	1.63E-45
FBCD1_HUMAN	39.269 %	155	3.85E-45