Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C9.344.v1....' > 
  2. Transcript 'Moocci.CG.ELv1_2.S64...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S648024.g29881.01.t

Possible name(s)

SF3A1; SFSWAP

Gene model

Moocci.CG.ELv1_2.S648024.g29881

Location

S648024 [2,790 / 6,101]

Sequences

Amino acid sequence

Length: 199

>Moocci.CG.ELv1_2.S648024.g29881.01.p
MSHLPPTNETPQEEEKPFLAPPSLALPSDMEIVFSVHPATDKTHKIIERTALFVSKQGAQ
MEIVLKAKQANNTQFNFLQFDHYLNPYYKHMYLTASTYYNWGITVSNDLSPCPIPYLTPS
TYYNWGITVSNDLSPCPIPVNLLYYNVKGLISFYCQKLVCHDISSNLKNCNVVKRMKEGK
YVVGNDEENKSEKRNKHKT

Nucleotide sequence

Length: 600

>Moocci.CG.ELv1_2.S648024.g29881.01.t
ATGTCACATCTTCCCCCAACCAATGAAACACCTCAAGAAGAAGAGAAACCATTTCTTGCT
CCGCCTTCGCTAGCATTGCCGAGTGATATGGAGATCGTTTTTTCTGTGCATCCGGCAACA
GACAAGACCCACAAAATAATCGAGCGAACGGCCCTGTTTGTGAGCAAGCAAGGAGCACAA
ATGGAGATTGTTTTGAAAGCTAAACAAGCCAATAACACTCAGTTCAACTTCCTACAGTTT
GATCATTATCTCAACCCATACTATAAGCATATGTACCTCACTGCCAGTACATATTACAAT
TGGGGAATTACTGTATCGAACGACTTGTCACCTTGCCCGATACCTTACCTCACTCCCAGT
ACATATTACAATTGGGGCATTACTGTATCGAATGACTTGTCACCTTGCCCAATACCTGTA
AACCTGTTATATTATAATGTAAAGGGCTTAATCTCGTTTTACTGCCAAAAGTTGGTCTGC
CATGATATTAGCAGCAATTTGAAAAATTGCAATGTAGTGAAACGAATGAAAGAAGGGAAG
TATGTGGTGGGAAATGATGAAGAAAATAAATCTGAGAAGCGCAATAAACACAAAACATAA

InterProScan

SUPERFAMILY
SWAP/Surp_sf (IPR035967) - T[24-92] 7.19E-21
Gene3D
SWAP/Surp_sf (IPR035967) - T[39-94] 2.8E-25
SMART
Surp (IPR000061) - T[44-97] 4.3E-16
Pfam
Surp (IPR000061) - T[45-91] 4.4E-15
ProSiteProfiles
Surp (IPR000061) - T[46-88] 15.696

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SFSWA_HUMAN 65.753 % 98.6 4.89E-24