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- Transcript 'Moocci.CG.ELv1_2.S64...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S647652.g29801.01.t
Possible name(s)
HOXA4; HOXB4; HOXC4
Gene model
Location
S647652 [17,194 / 19,293]
Amino acid sequence
Length: 383
>Moocci.CG.ELv1_2.S647652.g29801.01.p
MRTRVKRSFYMFTEQGDTGKRPRTAYTRHQVLELEKEFHYNRYLTRRRRIEIAHSLCLTE
RQVKIWFQNRRMKWKKDHKLPNTKTNHTQAKKARTKTATVHHDPINTGYYMNSSLAGPSG
FQPIPDIRVMDPTYQTMPQYPEDPVLTRGASFDAGDMNHMVMTQSDTFSHPFLDMRRNQT
PPVTRNDSFRHLGINQIRNAVSLDYGDDYTPTTSSYMPKINSMARPTGSFNLVTMEQQHE
SNLHVSPDYNRTNAYSPSGDFNTLTVPTDSYYQRGNRPPFLQSLSCPETSIVPTNGPSEV
LHHVNMSPRRDMIRSPSIGDSPYLNVPVSGNLNHHTNGIDGINLSPNSTAHENNNNSNNI
TEELYSYDIKPTVPTTVFPKVLC
Nucleotide sequence
Length: 1,152
>Moocci.CG.ELv1_2.S647652.g29801.01.t
ATGCGAACAAGAGTAAAAAGATCTTTTTACATGTTTACCGAACAAGGGGATACCGGAAAA
CGACCTCGTACGGCTTACACCCGACATCAAGTGTTGGAGCTGGAAAAAGAATTCCACTAC
AACAGATACTTGACCAGGCGACGCAGGATAGAGATTGCACATTCTCTGTGTCTTACAGAA
CGACAAGTAAAAATTTGGTTTCAAAACCGACGCATGAAATGGAAGAAAGACCATAAATTG
CCAAACACAAAAACAAACCACACACAGGCCAAAAAGGCAAGAACGAAAACAGCGACAGTT
CATCATGACCCTATCAACACTGGTTACTACATGAACTCAAGTTTGGCAGGACCGAGCGGC
TTCCAACCCATTCCTGATATAAGAGTTATGGACCCAACTTACCAGACAATGCCTCAGTAT
CCAGAAGACCCAGTGTTGACCCGTGGGGCGTCGTTTGACGCCGGGGATATGAATCACATG
GTCATGACCCAATCTGATACTTTCTCCCATCCTTTCCTTGATATGAGACGTAATCAAACT
CCTCCAGTAACGCGAAATGATTCTTTTAGACATCTTGGAATTAACCAGATCAGAAATGCT
GTTTCATTAGACTATGGCGATGACTATACTCCTACAACCTCAAGTTACATGCCCAAGATA
AACAGTATGGCTCGTCCGACTGGGTCATTCAACCTGGTTACAATGGAACAGCAACACGAA
TCTAATCTGCATGTGAGCCCTGACTACAACAGAACGAATGCTTACTCTCCGTCAGGAGAT
TTTAACACTTTAACTGTCCCTACTGATAGTTATTATCAGCGTGGGAATAGGCCACCATTT
TTGCAATCTTTATCGTGTCCTGAAACCTCAATAGTGCCCACTAACGGACCAAGTGAAGTG
CTACATCATGTTAATATGTCGCCACGTCGAGATATGATCAGATCACCATCAATTGGAGAT
TCTCCTTATCTAAATGTTCCCGTGTCTGGGAATCTAAACCATCATACTAATGGTATTGAT
GGAATCAACTTATCTCCTAATTCAACAGCTCACGAAAACAACAACAATAGTAACAACATA
ACAGAAGAACTTTATTCTTATGATATAAAACCTACAGTACCTACAACAGTATTCCCAAAA
GTTCTTTGTTAA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[12-77] 1.92E-25 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[17-77] 21.945 |
| SMART |
Homeobox_dom (IPR001356) - T[19-81] 8.5E-28 |
| CDD |
Homeobox_dom (IPR001356) - T[20-78] 2.68217E-26 |
| Pfam |
Homeobox_dom (IPR001356) - T[20-76] 7.6E-23 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[41-52] 9.1E-9 - T[56-66] 9.1E-9 - T[66-75] 9.1E-9 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[52-75] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXA4_HUMAN | 88.406 % | 136 | 3.36E-37 |
| HXC4_HUMAN | 87.143 % | 136 | 9.86E-38 |
| HXB4_HUMAN | 86.957 % | 135 | 2.36E-37 |