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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Moocci.CG.ELv1_2.S64...' > 
  3. Transcript 'Boleac.CG.SB_v3.S12....' > 
  4. Transcript 'Moocci.CG.ELv1_2.S64...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S644719.g29385.01.t

Possible name(s)

TPM1; TPM3; TPM4

Gene model

Moocci.CG.ELv1_2.S644719.g29385

Location

S644719 [1,349 / 5,492]

Sequences

Amino acid sequence

Length: 446

>Moocci.CG.ELv1_2.S644719.g29385.01.p
MYIFVLDIVSNRSKLQPITMDAIKHKMEGLIKDKDEAIERAVRMEEEKEAFEQKARELET
EINAINKKIVQAEDDLDKVMENHRESLEKVEVAEKTATDSELEVSAQTRKMQLLEEEMAR
VTERLNETVAKLDIAEKAAEESERGRKVLEGRSFKDEETLELQEIQLREAKTIAEDADRK
YEQVGRKLRMVENDLERVVDRAEEHENKIKNYTEQLKGLNDEMKKMEEIAAKNTEAEDNY
ETEIHTLSEKLKNAETRAEFAERTVDKLENTHKMEGLIKDKDEAIERAVRMEEEKEAFEQ
KAKELETEINAINKKIVQTEDDLDKVMENHRESLEKVEVAEKTATDSELEVSAQTRKMQL
LEEEMARVTERLNETVAKLDVAEKAAEESERGRKVLEGRAEFAERTVDKLENTIDYLEEQ
LYTEKLAYKGVSEKLDKTLTDMVNFQ

Nucleotide sequence

Length: 1,341

>Moocci.CG.ELv1_2.S644719.g29385.01.t
ATGTATATATTTGTATTGGACATTGTTTCTAATAGAAGCAAACTACAACCAATCACTATG
GACGCAATCAAACATAAGATGGAAGGTTTGATCAAGGACAAAGACGAAGCGATTGAACGC
GCAGTCCGCATGGAAGAAGAGAAAGAAGCTTTTGAACAAAAAGCAAGGGAACTCGAGACC
GAGATAAACGCTATTAACAAAAAAATCGTTCAAGCTGAAGACGATCTTGACAAAGTAATG
GAAAATCATCGAGAATCCTTGGAAAAGGTAGAAGTTGCAGAAAAGACCGCAACTGATTCT
GAATTAGAAGTGAGCGCTCAAACCAGGAAAATGCAACTTCTCGAGGAAGAAATGGCCCGA
GTTACCGAACGTCTCAACGAAACTGTTGCAAAACTTGATATAGCAGAAAAAGCTGCCGAA
GAAAGCGAACGAGGACGTAAGGTCTTGGAAGGAAGGTCGTTTAAAGATGAAGAAACTCTT
GAACTTCAGGAAATCCAACTTCGTGAAGCTAAAACTATCGCTGAGGATGCAGATAGAAAA
TACGAGCAAGTCGGACGAAAGCTTCGCATGGTGGAAAACGATTTGGAACGAGTCGTCGAT
CGAGCTGAAGAACATGAAAATAAAATAAAAAATTACACTGAACAATTGAAAGGTTTGAAT
GACGAGATGAAGAAGATGGAAGAAATTGCCGCCAAAAACACAGAAGCAGAAGACAACTAC
GAAACTGAGATTCACACTTTGTCAGAAAAACTAAAAAATGCCGAAACAAGAGCCGAATTT
GCTGAGAGAACTGTTGACAAATTGGAAAACACACACAAGATGGAAGGTTTGATCAAGGAC
AAAGATGAGGCAATTGAACGCGCAGTCCGCATGGAAGAAGAGAAAGAAGCTTTTGAACAA
AAAGCCAAGGAACTCGAAACCGAGATAAACGCTATTAACAAAAAGATCGTTCAAACTGAA
GACGATCTTGACAAAGTTATGGAGAATCATCGGGAATCTTTAGAAAAGGTAGAAGTTGCA
GAAAAGACCGCAACTGATTCTGAATTAGAAGTGAGCGCTCAAACCAGGAAAATGCAACTT
CTCGAGGAAGAAATGGCCCGAGTTACCGAACGTCTCAACGAAACTGTTGCAAAACTTGAT
GTAGCTGAGAAAGCTGCCGAAGAAAGCGAACGAGGACGAAAAGTCTTGGAAGGAAGAGCC
GAATTTGCTGAGAGAACTGTGGACAAATTGGAAAACACAATCGATTATTTGGAAGAGCAA
CTGTACACTGAAAAACTTGCGTACAAGGGAGTCAGCGAAAAATTGGACAAAACTCTTACA
GACATGGTCAACTTCCAATAA

InterProScan

Pfam
Tropomyosin (IPR000533) - T[82-271] 5.5E-52 - T[273-412] 2.0E-19
PRINTS
Tropomyosin (IPR000533) - T[103-120] 1.7E-41 - T[139-159] 1.7E-41 - T[164-192] 1.7E-41 - T[194-217] 1.7E-41 - T[250-275] 1.7E-41

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TPM3_HUMAN 52.778 % 208 3.28E-64
TPM1_HUMAN 53.175 % 226 2.0E-71
TPM2_HUMAN 52.778 % 196 9.73E-60