- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.S460.2.v1....' >
- Transcript 'KH2012:KH.C6.283.v1....' >
- Transcript 'Harore.CG.MTP2014.S4...' >
- Transcript 'Moocci.CG.ELv1_2.S64...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S644241.g29327.01.t
Possible name(s)
COL1A1; COL1A2; COL24A1
Gene model
Location
S644241 [69,637 / 86,138]
Amino acid sequence
Length: 1,310
>Moocci.CG.ELv1_2.S644241.g29327.01.p
MGGSFSSGQKGPSGVIAGPPGTMGPRGAPGQSGPPGPQGFNGPPGEPGDSGPPGPPGPLG
PIGQTGKPGSNGEPGSPGKPGQMGEPGAQGPRGFAGVPGVPGTKGHRGYSGLNGAKGEAG
ADGSPGDTGLPGEPGPQGLIGPRGMQGDRGRNGQPGPPGLRGADGLAGTVGPPGAQGLSG
PPGFPGTPGSKGEAGPTGATGPEGAQGQRGEAGSPGSAGPPGATGSPGVDGSPGPKGSTG
SSGVAGPPGLSGPRGPPGPQGSMGLLGPKGNQGQPGMNGFKGDQGPKGSTGEMGPQGLLG
PQGKPGKRGVRGEPGPQGSLGPPGERGPAGNRGFPGADGQTGRKGASGDRGVPGKPGQKG
SSGDSGRPGETGLPGPRGLTGKPGNEGREGPAGPPGPTGLDGRPGSPGPTGTRGPPGQMG
FTGMKGTQGLPGKSGEKGIDGPPGVRGEPGKDGEIGPPGVMGPMGPAGERGETGQPGAPG
FQGQPGPQGPSGEPGKPGSTGVPGEIGPPGETGQRGERGFPGERGLAGATGQAGPRGVPG
LPGGDGQKGATGPMGQPGEAGPPGLQGLQGERGPAGLTGGKGDRGDTGPQGSEGAPGSDG
PRGLTGPGGPMGPVGPSGEKGDIGVTGEPGPVGPRGSPGERGDAGQPGPPGFPGGPGVDG
QPGKKGDVGARGMKGQAGNPGPQGSSGPAGPQGPTGVDGPKGSRGSVGPQGNRGFTGAPG
APGAPGQQGSMGPQGASGERGTPGAKGSQGDNGRPGPQGEPGPQGLNGLPGDRGAPGEPG
APGGDGPRGNLGLPGGPGTPGLPGPQGITGPRGLKGNPGEPGKQGPSGASGEPGSPGDTG
PRGFAGPPGEPGAEGESGPVGPPGRDGANGLKGERGGPGPSGAPGGPGLPGQPGPMGSEG
KSGPRGEPGTQGLQGSPGPEGGRGVPGVQGPRGDKGSPGARGVQGIKGHAGFRGLQGLAG
PPGKDGAPGPPGLAGPHGSRGSTGPRGPTGKDGNPGPPGVPGQQGYRGSDGVDGTPGPIG
PPGPPGPPGPPGMPVVPWPNINTQKGPDPLLFADQTSNDDANVVAGDNQVLMVLKELGNS
VQELKTPAGKDKKNPARSCRDIYLTLTASGEPAKSGLRWIDPNLGCSLDAIEVHCNFETM
ETCIYPQNRQVANSTHKERSMLEEDGTLFSRMPGGYRMDYTPPESARVARADYSNQISFL
RVLSSRARQVSNNSYLNTVAYYSEATRDYSQAITLIGSGGHKLTAQGDSRFQYSVAEGQD
GCSNRPESGKTVFTYETPYVGRMPLVDIKVKDYGRQDQEFGFEFGPVCFS
Nucleotide sequence
Length: 5,603
>Moocci.CG.ELv1_2.S644241.g29327.01.t
TTCAGAAGTTAGGGTTTAATAGGAGTCTTGGCTACTAGAGCTATAGAACCCTAAGCCGGG
TGTGGGCGCTATTGATCTTCGCGTCTCATCCGTGAAACAGCGGAATATACATGCTATAGG
CGTGTATAGCCGGAATCACGATGACCAATTCCTACTTACTAGTGGCGGCATGCCTGCTAG
TGCTACATGGCGCGGCGAGGGGACAAGACTGTAAAGTGAATGGAGCAACCTACAAACCTG
GAGAGGTTTTTAAGCCGACAGAATGCGAAGTTTGTCTATGCGACGCCGGAAAATTAATAT
GTGATAAAATAATATGCCAAGAGCTAGACTGCCCTGAACAATACACACCAGAGAAAGAAT
GCTGCCCCGTGTGCGTTAAACCGGGGGGCCGGGGGCCAGGATCTAGTAAGTTCCTATTGG
AGAGGACCAAAAGGTGAAAAGGGTGAACCAGGAACCTTGCCCGATATACTTGGCGAGGGA
CCTGCTGGACCCCCAGGACCACCGGGACAACCAGGAAACCCAGGTCCAGTTGGGCCACGA
GGTCCTAAAGGAACCACAGGATCTCAAGGACCAAGGGGTAACGATGGAATCAATGGTGTA
CCCGGGCCTCCAGGACCACCAGGACCCCCAGGCCCCGGCAGTGAAATGGGCGGATCTTTT
TCGTCTGGACAGAAAGGACCTAGTGGAGTAATTGCTGGGCCACCAGGAACAATGGGACCC
CGCGGAGCCCCAGGACAATCTGGACCACCTGGACCCCAAGGTTTTAACGGACCGCCAGGA
GAACCCGGTGACAGTGGACCACCAGGACCACCAGGACCACTTGGGCCGATTGGCCAGACA
GGAAAACCAGGATCGAATGGAGAACCAGGTAGCCCCGGTAAACCAGGACAAATGGGTGAA
CCTGGAGCACAGGGACCAAGAGGATTTGCCGGTGTGCCAGGAGTTCCAGGAACCAAAGGA
CACAGAGGTTACTCAGGGTTAAACGGAGCGAAGGGTGAAGCTGGGGCTGATGGGTCACCA
GGTGACACTGGTCTTCCAGGCGAACCAGGACCCCAGGGTCTTATTGGACCCCGTGGTATG
CAAGGAGATCGCGGTCGAAATGGTCAGCCAGGACCCCCAGGTTTAAGAGGTGCTGATGGG
TTAGCAGGAACAGTTGGGCCACCAGGGGCACAAGGTTTAAGTGGACCTCCGGGATTTCCA
GGTACCCCCGGGTCAAAGGGTGAGGCCGGACCAACAGGAGCTACCGGACCGGAGGGCGCG
CAGGGACAGAGAGGAGAGGCAGGAAGCCCAGGCTCAGCTGGACCCCCTGGAGCCACTGGA
TCACCAGGTGTGGATGGTTCACCCGGACCCAAAGGATCAACGGGATCATCTGGTGTTGCT
GGCCCACCTGGATTGTCTGGACCAAGAGGACCTCCTGGGCCACAAGGTAGCATGGGATTA
CTTGGACCCAAGGGTAACCAGGGTCAACCTGGTATGAATGGATTCAAAGGAGACCAAGGA
CCAAAAGGTTCAACGGGTGAAATGGGACCGCAAGGTTTATTGGGACCACAGGGCAAACCT
GGCAAACGTGGAGTTCGTGGAGAACCTGGTCCACAAGGATCACTCGGACCACCAGGTGAA
AGGGGACCTGCAGGTAACCGTGGTTTCCCCGGTGCCGATGGACAAACAGGACGAAAGGGA
GCAAGCGGAGATAGAGGTGTGCCTGGAAAACCTGGACAGAAAGGGTCAAGCGGAGATTCG
GGACGACCGGGTGAAACTGGTTTGCCTGGACCAAGAGGTCTGACTGGTAAACCAGGTAAC
GAAGGACGAGAAGGACCAGCTGGACCACCTGGACCCACTGGACTCGATGGTAGACCAGGC
AGTCCCGGACCCACTGGAACAAGAGGACCACCAGGCCAAATGGGATTCACTGGAATGAAA
GGAACTCAGGGTCTTCCAGGAAAATCTGGCGAAAAGGGTATTGACGGACCACCAGGTGTC
AGAGGTGAACCAGGTAAAGATGGAGAAATTGGACCTCCAGGTGTTATGGGACCAATGGGA
CCAGCTGGAGAGCGAGGTGAAACTGGCCAACCAGGAGCTCCAGGGTTCCAAGGCCAACCA
GGACCCCAGGGACCATCGGGTGAACCAGGAAAACCAGGCAGCACTGGAGTCCCAGGTGAA
ATTGGACCTCCAGGTGAAACTGGTCAGAGAGGAGAGAGAGGTTTTCCAGGAGAACGAGGT
TTGGCAGGAGCCACTGGACAAGCTGGACCAAGAGGTGTACCAGGTCTGCCTGGTGGTGAT
GGCCAAAAGGGTGCCACTGGCCCCATGGGTCAGCCAGGCGAGGCTGGGCCACCTGGTTTG
CAAGGACTTCAAGGAGAACGAGGACCGGCTGGATTAACCGGTGGAAAGGGAGACAGAGGA
GATACTGGACCACAAGGATCTGAAGGTGCCCCTGGTTCCGATGGACCAAGAGGTCTTACA
GGACCCGGAGGTCCAATGGGACCTGTGGGACCATCTGGAGAAAAGGGAGACATAGGTGTA
ACTGGGGAACCAGGTCCAGTAGGACCAAGAGGTAGCCCAGGTGAACGTGGTGATGCTGGA
CAGCCAGGACCACCAGGTTTCCCAGGTGGACCAGGTGTTGATGGACAACCAGGAAAGAAG
GGAGACGTTGGTGCCAGAGGAATGAAAGGTCAAGCTGGTAACCCAGGACCTCAAGGTTCA
TCAGGACCGGCAGGACCACAGGGACCCACTGGTGTTGATGGACCGAAAGGATCTCGCGGA
TCTGTTGGACCTCAAGGAAACCGTGGTTTTACTGGTGCTCCAGGAGCCCCAGGTGCTCCT
GGACAGCAGGGATCTATGGGTCCACAAGGTGCATCTGGCGAAAGAGGAACCCCAGGTGCC
AAGGGTAGCCAGGGTGACAACGGAAGACCAGGACCACAAGGAGAACCAGGACCACAAGGT
TTGAACGGGCTGCCAGGAGATCGAGGCGCACCTGGAGAACCTGGTGCACCTGGAGGAGAT
GGACCAAGAGGAAATCTTGGACTTCCAGGAGGTCCCGGAACACCAGGTCTTCCCGGACCA
CAAGGTATTACTGGACCACGAGGTCTCAAAGGCAACCCCGGTGAACCCGGTAAACAAGGG
CCATCAGGAGCAAGTGGAGAACCTGGGTCCCCAGGTGACACTGGTCCCAGAGGATTTGCT
GGTCCACCAGGAGAACCTGGTGCCGAAGGAGAATCGGGACCAGTTGGACCACCAGGACGA
GATGGGGCTAACGGACTCAAGGGAGAACGCGGAGGTCCTGGACCAAGTGGAGCCCCAGGT
GGACCCGGGTTGCCAGGCCAACCAGGACCCATGGGTTCGGAGGGAAAGAGCGGACCAAGA
GGAGAACCAGGCACACAAGGTTTACAAGGGTCGCCAGGCCCAGAGGGAGGAAGAGGTGTA
CCGGGTGTACAAGGGCCACGTGGTGACAAAGGTAGCCCCGGAGCAAGAGGTGTTCAAGGT
ATTAAAGGTCACGCTGGGTTCAGAGGTCTTCAGGGATTGGCCGGACCACCGGGTAAAGAT
GGAGCTCCAGGACCTCCAGGTTTGGCTGGGCCCCATGGATCACGTGGTTCTACTGGACCC
CGTGGACCCACTGGCAAAGACGGAAATCCTGGCCCCCCTGGTGTCCCTGGACAACAAGGT
TACCGTGGTAGCGATGGAGTGGACGGAACACCAGGACCAATCGGACCCCCAGGACCTCCC
GGCCCACCTGGACCTCCAGGAATGCCAGTTGTGCCTTGGCCAAACATCAACACACAGAAA
GGACCCGATCCACTTCTGTTCGCCGATCAAACATCCAACGACGATGCCAATGTTGTGGCT
GGAGACAACCAAGTCCTAATGGTATTGAAGGAGCTAGGCAACAGCGTACAAGAGCTTAAA
ACACCTGCAGGAAAAGACAAAAAGAACCCAGCTAGATCTTGCCGAGATATCTACCTCACA
CTAACTGCTTCTGGAGAACCTGCTAAGAGCGGACTTCGTTGGATCGATCCCAACTTGGGT
TGCAGCCTTGATGCGATTGAAGTCCACTGTAATTTCGAGACGATGGAAACATGCATCTAT
CCACAAAATCGACAAGTTGCCAACTCCACACACAAAGAGCGAAGCATGTTGGAGGAAGAT
GGTACACTCTTCTCAAGAATGCCTGGCGGTTACCGAATGGACTACACACCACCAGAGAGC
GCTAGAGTGGCACGAGCCGACTATAGCAACCAGATCTCTTTCTTGCGTGTCCTGAGCTCG
AGAGCTAGACAGGTTAGTAACAACAGTTATTTAAACACAGTTGCGTATTACTCGGAAGCA
ACTCGCGACTACTCACAAGCCATCACGCTTATCGGTTCTGGAGGTCACAAGCTGACAGCT
CAAGGTGACTCGAGGTTCCAATACTCTGTCGCTGAGGGACAAGATGGTTGCAGCAACCGT
CCTGAATCCGGAAAAACAGTGTTTACGTACGAAACACCGTATGTAGGAAGAATGCCTTTG
GTTGACATCAAGGTGAAAGACTACGGCAGACAAGACCAAGAATTCGGATTTGAATTTGGC
CCAGTTTGCTTTAGCTAAATCAACAATCGTTAATTAAACTGCGAAAACGACCAAACGCAG
TAATAAGTATCGTTTGAAGCCTGACGGACATGACTATATTCCTAGACAACGATTTTGGAC
AGAAAGTGGACAAAAAACATGAACTGACGACGACCTTTATTTCAATTTCACTAAGTGCAT
TTTTACGTATAGTTGATTCTATTTTATTTTTTAATGCTTCAGCATAAAATGGCTGCAATA
CCTATATTATCAATTCACTAAATTTCTTTTCTGTTTATGACAAGTATTTGTGGGTTTTGC
TGTACTTGGCAAATTGCTTGCCGTTTATACTATTATTTTTGCTTATTATTTTTTACTTTG
TTTTATTTTACATTTTTCGCTTCACTCTATTATTTTTATTATTTTATTGCGTCATTATAA
AAAGAGGTGCTCACACAATACAACTTTCAGCATACAAAATAGGATTTTTACCATAATGTA
CTTTTACACGTTGTTTTTGTAGTATTTAAATTTAAAAACGTTTATATATTGCATTGTGTA
ACTTTTGTGCCGTTTGTTTTTGTTTATTTCTGTTGTATTTGTACATAATTCCAATCATCT
ACCAAACCAGTATTAGCGATTATTCGCGTATTTTTCATTACTAACATGTAACAATTACTC
AACCATATAATAGTTTAAAATTGATCATTAAATATTTGTGTTTAAGTATTTATCTTTGTC
TATTTATACTGTGCATATATAATCGTTTTTGGCTCTATTTTTTGTTATCGAAATTTTAAA
TGGCCGTCATGTTTCCCAGCACGAATACGATGCTCATTTTCAGTTTCCATGACGATTAGT
AGTTGCTAAGCGCCCATGGTGCGACAATTCTTTTTTCCCAACGTATAAATTCATCATTTT
GCTAAAAGTTCTATTTTTTATTTAAATTATCCGTGATCGATATGCCCATATCGAAAATGC
TTTGACCATTTTGCCTTATTTTATTTTTTATTCATTCTAATTCTTATTATTAGCTTAAAT
TAAATTTGGCTTTGCCATTAAAA
| Pfam |
Collagen (IPR008160) - T[402-454] 1.7E-8 - T[918-976] 3.2E-8 - T[975-1033] 9.2E-9 |
| SMART |
Fib_collagen_C (IPR000885) - T[1067-1310] 9.4E-56 |
| Pfam |
Fib_collagen_C (IPR000885) - T[1067-1309] 8.1E-65 |
| ProSiteProfiles |
Fib_collagen_C (IPR000885) - T[1068-1310] 64.655 |
| ProDom |
Fib_collagen_C (IPR000885) - T[1197-1309] 4.0E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COOA1_HUMAN | 36.924 % | 425 | 5.81E-125 |
| CO1A2_HUMAN | 50.078 % | 589 | 0 |
| CO1A1_HUMAN | 53.864 % | 567 | 2.18E-178 |