- Transcript 'Moocci.CG.ELv1_2.S63...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S639242.g28526.01.t
Possible name(s)
PARN; PNLDC1
Gene model
Location
S639242 [39,832 / 46,050]
Amino acid sequence
Length: 529
>Moocci.CG.ELv1_2.S639242.g28526.01.p
MLLLRFEAVNNNSPCNSPTPISEKTQVFVNTICKQIEEFLKTAGEGETLNLDPCNSYLRK
ILYETIPGRFSGSVFLESRTDDKRQRYLAVVRSCGEESLKQKRDEAKAKDDALLEEAIGF
SKIIHLLTSSEKLILGHNCLFDIVYIVQQFISSLPPTLSEFKSLVNCLFPRLIDTKLMGS
MLPFKDQLPSTSLGEMHTRLQIEPFGLPELDIPDKYNIDKTAQDVFLHEAGYDAYITGAS
FLGMLKFLHKISKNKNNNKVTPKSDFISPYCNKLFLMRSPEIPYLNLAGADLTPSRSHVF
HVQFPSSWKTNDVRQLFTMVTGGVQISWINDTQCFVGLYNKTQGNMVRKLIAQNRSGNVM
LRTYDEYQRDLVGQQHFQRERPFSQNKVWVANNAPKRSYSNAVSHNLQAEAQSTSKDEDS
NKPKVAKSENGAAVQLPSTSKSTPKINVNGKIPESKIQQDRKRHGNDIEADEPKDELDEP
KIKRQRSQEFLNGTQENKSTEDQPMPVKDQRMPVENIETSSAFAVPDTW
Nucleotide sequence
Length: 1,775
>Moocci.CG.ELv1_2.S639242.g28526.01.t
ATGTTGTTACTACGCTTTGAAGCTGTAAACAACAACAGTCCGTGCAACAGTCCAACCCCA
ATATCTGAGAAAACACAGGTTTTTGTGAACACTATTTGCAAACAAATAGAGGAATTCTTA
AAAACTGCTGGTGAGGGGGAAACTCTCAATCTGGACCCTTGTAATAGTTACTTGAGAAAA
ATTTTATATGAAACGATTCCTGGACGGTTTTCTGGGTCAGTATTTTTGGAATCCCGAACG
GACGATAAAAGACAGAGATATTTAGCGGTTGTGCGGTCATGCGGGGAAGAGTCCCTGAAA
CAGAAGAGGGATGAAGCTAAAGCTAAGGATGATGCTTTACTGGAAGAAGCGATTGGATTT
TCAAAGATAATCCACTTATTAACAAGTTCGGAAAAGTTGATTTTGGGCCACAACTGCCTG
TTTGATATTGTGTACATAGTTCAACAGTTTATCAGTAGCCTTCCGCCAACGCTAAGCGAA
TTCAAGTCCCTCGTCAATTGCCTTTTCCCTCGACTTATTGACACTAAGTTGATGGGCAGT
ATGCTCCCATTTAAGGACCAGTTGCCGTCTACATCACTCGGAGAAATGCATACACGTTTA
CAAATTGAACCGTTTGGTTTGCCAGAATTGGACATACCAGACAAATATAACATCGACAAA
ACTGCACAGGACGTTTTTTTGCACGAAGCTGGTTACGATGCTTATATAACTGGTGCATCG
TTTTTGGGAATGCTGAAATTTTTACACAAAATAAGTAAGAACAAAAATAACAACAAAGTA
ACCCCGAAGTCTGATTTTATTTCACCGTACTGCAATAAGTTGTTTTTGATGCGAAGTCCA
GAAATCCCTTACCTTAACTTGGCGGGGGCTGACTTAACCCCTTCGCGCTCCCATGTGTTC
CATGTCCAATTTCCCTCCTCATGGAAAACGAACGATGTACGGCAGCTGTTTACCATGGTA
ACGGGGGGTGTACAAATATCATGGATAAACGACACACAATGCTTTGTTGGATTGTACAAT
AAAACCCAGGGCAATATGGTTAGAAAATTAATTGCTCAAAACCGTTCTGGGAATGTAATG
CTTAGAACTTATGATGAGTATCAACGAGATTTAGTTGGGCAACAGCATTTCCAGCGAGAA
AGACCTTTTTCACAAAACAAGGTTTGGGTAGCCAATAATGCCCCAAAGCGATCATACTCA
AATGCCGTAAGTCACAATCTTCAAGCAGAAGCACAGTCAACTTCCAAAGATGAAGATTCA
AACAAGCCTAAAGTTGCTAAATCTGAAAATGGAGCTGCTGTGCAATTGCCTTCTACATCA
AAAAGTACCCCTAAAATTAATGTGAACGGAAAAATTCCTGAATCAAAGATCCAACAAGAC
CGTAAACGCCATGGTAATGATATCGAAGCTGATGAACCAAAAGACGAACTCGATGAGCCA
AAAATCAAACGACAACGATCACAGGAATTTTTGAATGGCACCCAAGAAAACAAGTCCACT
GAAGACCAGCCTATGCCTGTTAAAGACCAGCGTATGCCTGTTGAAAACATTGAGACGTCT
TCAGCTTTTGCAGTCCCTGATACTTGGTGAAATGCAATTTGTATTGTCCTTTAACTAAGG
CAATATAACTTTAACCATGACCTGTCACAGTAATAGTAGTGGCACTTGTAAGTATAGCAC
CATACACAATCCAACAGTTCATGTTTTTCAGCAGGAGTGGGTTATTTATTAAATAAAATG
AAAACTGCTGTCTAATAAAAGACAGCTCAATTTGC
| Gene3D |
R3H_dom_sf (IPR036867) - T[5-89] 3.8E-20 |
| SUPERFAMILY |
R3H_dom_sf (IPR036867) - T[18-101] 2.35E-15 |
| Pfam |
R3H_dom (IPR001374) - T[28-88] 2.6E-4 |
| Pfam |
RNase_CAF1 (IPR006941) - T[52-241] 7.5E-34 |
| Gene3D |
RNaseH_sf (IPR036397) - T[90-282] 2.5E-53 |
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[115-249] 7.0E-26 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[283-349] 4.36E-5 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[284-380] 1.6E-22 |
| Pfam |
PolyA-riboNase_RNA_binding (IPR014789) - T[289-369] 5.4E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PARN_HUMAN | 37.748 % | 284 | 1.86E-88 |
| PNDC1_HUMAN | 25.175 % | 81.3 | 3.09E-16 |
