- Transcript 'Boleac.CG.SB_v3.S581...' >
- Transcript 'KH2012:KH.L152.32.v1...' >
- Transcript 'Moocci.CG.ELv1_2.S63...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S634066.g27814.01.t
Possible name(s)
POC1A; POC1B; RACK1
Gene model
Location
S634066 [8,594 / 12,779]
Amino acid sequence
Length: 321
>Moocci.CG.ELv1_2.S634066.g27814.01.p
MCEQMTLRGTLKGHNGWVTQIATTPAYPDMILSASRDKSIILWKLTREDVRYGIPQRRLH
GHSHFVTDVVISSDGQFALSGSWDGELRLWDLTLGCSTRRFTGHTKDVMSVAFSTDNRQI
VSASRDRTVKLWNTLGVCKYTIMDEGHSDWVSCVRFSPNAGNPVIVSCGWDKVVKVWNLT
NCRLKTNHFGHTAYINTVTVSPDGSLCASGGKDGQAMLWDLNEGRHLYTLNGEAEIHAMA
FSPNRYWLAAACGPSVKIWDLEGKVIVDELQPEVINIANSKAAPPECLSLAWSADGQTLF
AGYADSLIRVWQVSVPAQHAS
Nucleotide sequence
Length: 1,532
>Moocci.CG.ELv1_2.S634066.g27814.01.t
CTTCGTAGTCAGCAAAGTGCTGTAAACAATCGGTCCTTTTTCAGGTTGTGATCTGAGGTT
AGTGTGTAATATGGAAGAATAATTTAATCTGTTAATATCTGACCAATCGTAGGCAATCAA
TATAATCATGTGTGAACAAATGACTCTTCGTGGAACCCTTAAGGGGCATAATGGATGGGT
TACTCAAATTGCAACCACTCCTGCTTATCCTGATATGATTTTGTCTGCTTCTAGAGACAA
AAGTATCATTTTGTGGAAACTTACAAGAGAGGATGTTCGATATGGAATACCACAAAGACG
GCTCCATGGCCATTCACACTTTGTAACTGACGTCGTTATATCATCTGATGGACAGTTTGC
ACTATCAGGTTCATGGGATGGTGAACTGAGACTTTGGGATTTAACTCTTGGTTGCAGCAC
GCGCAGATTCACTGGCCATACTAAAGATGTCATGTCTGTTGCTTTCTCTACAGATAACCG
TCAAATTGTTTCAGCTTCCCGTGACAGAACAGTTAAACTGTGGAATACCCTTGGTGTTTG
CAAATACACTATAATGGATGAAGGTCATTCAGATTGGGTATCCTGTGTTCGATTTTCACC
CAATGCTGGAAACCCAGTAATTGTGTCTTGTGGTTGGGACAAAGTTGTTAAGGTTTGGAA
TTTAACCAATTGTAGACTGAAGACCAATCATTTTGGGCACACTGCTTATATTAATACCGT
AACTGTATCCCCTGATGGTTCATTATGTGCATCTGGTGGTAAAGATGGCCAAGCTATGCT
TTGGGATCTTAACGAAGGTCGCCACTTGTATACATTAAATGGTGAAGCTGAAATTCATGC
AATGGCCTTTTCACCAAATCGATACTGGTTAGCAGCAGCGTGCGGTCCATCAGTTAAGAT
CTGGGATTTGGAAGGCAAAGTAATCGTGGATGAATTACAGCCTGAAGTGATTAACATTGC
GAACAGCAAAGCTGCTCCTCCAGAGTGTCTTTCATTGGCATGGTCAGCTGATGGACAGAC
TTTATTCGCGGGATATGCCGATAGTTTGATTCGAGTTTGGCAAGTTTCTGTTCCTGCACA
ACATGCATCATAAATACTGTTGTTATTTAAAAGGTTAAACAGTGAAATAAAATAAAAAAC
TTTAAAAAATCTACAATTTTTACATAAGTTCAAAGGTTGTCAGGTCCAGTTTAAATTTTT
TTTATTGCATTGCTTCTTTAAAGATCCTATCTAAAAGTCATAAACAATTAAGTATCCTGA
TTTCAAAAATATATTTTCAATTTTAAATGTTTTTATTTGGTTAGAGTTAGGAGGTATTTA
ATTTTTTCCCATACTGTTCTATGTTGTGAATTTCAATTTGATTTAACCCTACTTGACAAC
TTACAAGGTAAAACTATTTAGTTAATACTCAAAAACTTTGTATAGTTTTGTTCCGCACAG
TTGTTGAAATACAGTGCTTTTTAAGCGTACTCAGTCCTCACCGAAAACTCTAGTTTAGTC
TTTTGTAATATACTGTCTGTAACTGAAAATAC
| SMART |
WD40_repeat (IPR001680) - T[4-44] 1.6E-6 - T[52-91] 3.0E-7 - T[94-133] 9.0E-10 - T[135-178] 1.9E-8 - T[180-220] 9.6E-8 - T[223-260] 0.06 - T[271-312] 0.4 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[5-313] 7.33E-74 |
| Pfam |
WD40_repeat (IPR001680) - T[8-44] 0.0016 - T[55-91] 4.8E-8 - T[98-133] 2.1E-8 - T[145-178] 1.4E-5 - T[188-220] 1.2E-5 - T[225-260] 1.6E-4 - T[289-311] 0.018 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[8-318] 6.7E-134 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[11-45] 11.177 - T[59-92] 14.184 - T[101-133] 15.722 - T[144-187] 12.012 - T[188-229] 14.652 - T[289-314] 9.205 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[11-321] 51.095 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[78-92] 5.1E-8 - T[120-134] 5.1E-8 - T[207-221] 5.1E-8 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[78-92] . - T[120-134] . - T[165-179] . - T[207-221] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| POC1A_HUMAN | 28.981 % | 119 | 8.88E-31 |
| POC1B_HUMAN | 27.812 % | 122 | 2.1E-31 |
| RACK1_HUMAN | 80.635 % | 548 | 0 |