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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S4...' > 
  2. Transcript 'Harore.CG.MTP2014.S4...' > 
  3. Transcript 'Moocci.CG.ELv1_2.S63...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S633042.g27702.01.t

Possible name(s)

SURF1

Gene model

Moocci.CG.ELv1_2.S633042.g27702

Location

S633042 [5,369 / 6,029]

Sequences

Amino acid sequence

Length: 220

>Moocci.CG.ELv1_2.S633042.g27702.01.p
TWQIKRNKWKKGLIASLNERTSKDPIELPSNLREVFNLEYRPVTVTGEFDHSKELHLQAR
NFLDPTRKDDLGGGLVSQKQNHGINVVTPFYIPERGYSILVNRGFVPTAVKEAECREKGQ
IKGPVTLTGLVRLTERKPAYVNENSPHHNQWYYRDINKMAQWTKSAPVFIDADYSSTVPA
GPIGGQTRVILRDEHVSYIITWYSLSAITSLLWYFRYFKR

Nucleotide sequence

Length: 660

>Moocci.CG.ELv1_2.S633042.g27702.01.t
ACTTGGCAAATAAAAAGAAATAAATGGAAAAAAGGACTAATTGCGTCACTAAACGAAAGA
ACTTCAAAAGATCCCATAGAACTGCCATCAAATTTGCGTGAAGTTTTTAATTTGGAATAT
CGTCCAGTAACAGTAACGGGAGAATTCGATCATTCAAAAGAACTTCATTTACAAGCACGG
AACTTTTTAGACCCCACTAGAAAAGATGACCTCGGTGGGGGGTTGGTTTCTCAAAAGCAA
AACCATGGTATAAATGTCGTAACACCTTTTTATATACCAGAAAGAGGGTATAGCATCCTT
GTCAACAGGGGCTTTGTGCCAACAGCAGTTAAAGAAGCAGAGTGTAGAGAAAAGGGACAA
ATAAAAGGTCCTGTGACGTTAACTGGACTTGTACGCCTAACAGAAAGAAAGCCAGCATAC
GTCAACGAAAACTCTCCGCATCATAATCAATGGTATTACAGAGATATAAACAAAATGGCA
CAATGGACTAAAAGTGCCCCTGTATTTATAGATGCTGATTATTCAAGCACGGTGCCTGCT
GGCCCGATTGGGGGTCAAACGAGGGTTATTTTGCGAGATGAGCATGTATCTTATATTATT
ACATGGTATTCATTATCTGCTATAACTTCTTTATTGTGGTACTTCAGATATTTTAAAAGA

InterProScan

ProSiteProfiles
Surf1/Shy1 (IPR002994) - T[1-220] 40.439
CDD
Surf1/Shy1 (IPR002994) - T[1-212] 3.20172E-59
Pfam
Surf1/Shy1 (IPR002994) - T[1-207] 1.2E-37

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SURF1_HUMAN 53.425 % 248 1.11E-82