- Transcript 'Moocci.CG.ELv1_2.S63...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S631655.g27541.01.t
Possible name(s)
ZIC1; ZIC3; ZIC4
Gene model
Location
S631655 [7,746 / 15,587]
Amino acid sequence
Length: 587
>Moocci.CG.ELv1_2.S631655.g27541.01.p
MRDSDIGNANNNINNNNKFDFDFKYSVEQPRHLAYGGFSNDYAHSVDQTFQGQNEAQQDG
YYWSTYNNSAQAEYQDQSPNAAAGLGNDSSVVPYTMPTASGYRRYTTDFPTDGRYSYQDS
YYSAFPNSSNFSHTPYSSDSLPLGISQSQSAFNLNYRLNTAPKFYPTAQPVPEFYSYVNH
PQHYEMRGEFVCKWTRPMLSVMNDHGPLPQAVELLNTGEYPDQICNRVFGNIMDLVSHVS
ICHIGGPEQVDHTCYWEACARAGKAFKAKYKLVNHLRVHTGEKPFSCPFPSCGKVFARSE
NLKIHKRIHTGERPFTCTYPGCDRRFANSSDRKKHSHVHTADKPYNCKVSGCGKSYTHPS
SLRKHMRLHEAQGDVIGDVINDAALVLSTSPDGNNNSLPGVRDSAEAARFFEVYSSTDVK
TICENSKKRGRTDDDDGSNPGKRRSIENAISWDDTTNDVSSLPKPDFTYDKPSFRPLSDG
YRDDIVSMIQCEPNKLRVASECNLTESQPNDWYFYQTQKLGGMPTPPTDDSVLSNPSSYT
SPPQLSTQTTDAQFVSYPHMYYPPPHYPHLHNPASAKDSSLAQEQNT
Nucleotide sequence
Length: 2,382
>Moocci.CG.ELv1_2.S631655.g27541.01.t
AGAATGCTCGTAAACTGTCCGGAATATACAAATAATAAGAGAGGTTTAGCAAGCGCCACA
GAGCTTGCATTTAGCAACAGCGGTAGCACGCTAAGTTTCGTTTGTTAATAAGTGATCAGG
CTGTGATTGATTTTGCCTGCATACTGCACCGTAGGTTAGCCCGAACTCTCGAGAGCCACC
AGCTAAGCATCGCAGCAGTCGGTGGAGTCACGCAGCGCCATGAGGGACTCAGACATCGGC
AACGCCAACAACAACATCAACAACAATAACAAGTTTGATTTTGACTTCAAGTACAGCGTA
GAACAGCCGCGCCACTTGGCTTACGGCGGATTTTCAAATGATTACGCACACTCAGTCGAT
CAGACCTTTCAAGGACAGAACGAAGCGCAACAAGATGGATATTATTGGAGTACGTACAAC
AACTCGGCCCAAGCCGAATACCAGGACCAATCTCCGAACGCAGCAGCCGGCCTAGGCAAC
GATTCGAGCGTGGTTCCTTATACCATGCCCACAGCGAGCGGGTACCGACGGTATACTACC
GACTTCCCGACCGATGGAAGATATTCGTATCAAGACAGCTACTACAGCGCATTCCCCAAT
TCGTCTAACTTTAGCCACACCCCGTACAGCTCTGATAGTTTGCCTCTAGGAATTTCCCAA
TCGCAATCCGCCTTCAACCTGAACTACAGGCTAAATACCGCGCCGAAGTTTTACCCAACC
GCCCAACCGGTCCCTGAGTTTTATTCGTACGTGAATCACCCCCAACATTACGAGATGAGG
GGGGAGTTTGTTTGCAAGTGGACGAGGCCAATGTTGTCGGTGATGAACGACCACGGGCCC
CTGCCCCAGGCGGTAGAACTACTCAACACCGGGGAGTACCCGGATCAAATCTGCAACCGG
GTATTTGGAAACATAATGGACCTGGTGTCGCACGTCAGCATCTGTCACATAGGCGGACCG
GAGCAGGTGGACCACACGTGCTATTGGGAGGCGTGCGCCAGGGCCGGGAAGGCTTTTAAG
GCAAAGTACAAGCTGGTTAATCATCTAAGAGTCCACACCGGCGAAAAACCGTTCTCTTGC
CCGTTTCCGTCCTGCGGTAAAGTTTTCGCGCGCAGCGAGAATTTAAAGATCCATAAAAGA
ATTCACACAGGAGAGCGTCCGTTTACCTGCACGTATCCTGGGTGCGACAGAAGATTTGCA
AACAGCTCGGATAGGAAGAAACATAGCCACGTTCACACGGCGGATAAGCCCTACAACTGT
AAGGTTTCCGGATGTGGTAAAAGTTACACTCATCCAAGCTCCCTACGTAAACACATGCGT
CTCCATGAAGCTCAGGGTGACGTCATCGGTGACGTCATCAATGATGCAGCATTGGTGTTG
TCGACTTCCCCCGACGGAAACAACAACAGTTTACCCGGGGTTCGAGACTCAGCGGAGGCT
GCAAGATTTTTTGAAGTTTACAGCTCCACCGATGTTAAGACGATCTGCGAGAATTCCAAG
AAACGAGGCAGAACGGACGATGACGACGGTTCAAATCCCGGCAAGCGTAGATCGATTGAA
AATGCTATTTCGTGGGATGATACTACGAATGACGTCAGCAGTCTACCCAAACCAGATTTC
ACGTACGACAAGCCGAGCTTTCGGCCGTTGTCCGACGGCTACCGCGATGACATTGTGTCC
ATGATACAATGCGAACCCAACAAGCTGAGGGTTGCTTCGGAGTGCAATCTCACCGAAAGT
CAACCTAACGACTGGTATTTTTACCAGACACAGAAGTTGGGGGGGATGCCTACTCCTCCC
ACCGATGATAGCGTGTTATCCAACCCTTCCTCTTACACCTCACCCCCACAACTTTCAACT
CAAACCACAGACGCACAATTTGTTTCCTACCCACATATGTATTATCCCCCACCCCACTAC
CCACACTTGCACAACCCCGCTTCTGCCAAAGATTCGAGTTTGGCGCAAGAGCAGAACACG
TGATTAATGCACTTTTGATTTGATTGTTTGCAAATAATAAAATGCTATGCACGTCACAAT
GATTTGCCTTTCTCATTTGTCATATATGACGCTACAATTTGCCTTGGTTAGCATTTTAAA
TATATATATATATTCAATTTATTTTTGTGTGTGTTTTTCGTTCCATAATTTTTGTCACCA
TAATGCTTTCCTACGGAGAGCCATATTAGCCATAAAGTATAGCTATCTTCCACTAAACGT
ATATTATTATATTAACCAATTGTGCAGTATAAATACCGATTTTAAGATTTTTATTTCGTC
AATTTTATTATTCAGGTAATTAGTATGTGCCTTAAAAATATTTTTGTAAATTTGCCTACT
TTTATATTTTGTTATCATAAACTGTATTAATAAACCTGCTTA
| SMART |
Znf_C2H2_type (IPR013087) - T[220-243] 54.0 - T[252-279] 16.0 - T[285-309] 0.001 - T[315-339] 0.022 - T[345-369] 4.5E-5 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[257-284] 12.882 - T[285-314] 16.872 - T[315-344] 12.84 - T[345-374] 12.612 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[265-322] 2.26E-19 - T[326-370] 3.96E-11 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[287-309] . - T[317-339] . - T[347-369] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC4_HUMAN | 55.76 % | 258 | 4.28E-81 |
| ZIC3_HUMAN | 57.143 % | 264 | 8.95E-82 |
| ZIC1_HUMAN | 60.406 % | 257 | 1.81E-79 |