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  1. Transcript 'Moocci.CG.ELv1_2.S62...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S627462.g27003.01.t

Possible name(s)

SNF8

Location

S627462 [14,721 / 18,270]

Sequences

Amino acid sequence

Length: 246

>Moocci.CG.ELv1_2.S627462.g27003.01.p
MRRRGVGAGAISRKKLQDAKYKAHGNELAAQQLQQLSNQLEVFHSNLEEFAAKHKHEIKK
NPQFRHQFQQMCAAIGVDPLASGKGFWSEMLGVGDFYYELGVQAIEICIATRLHNGGIMK
LQELHQRLMKTRGRYGQDISEEDVITAFKKLKVLGTGFTLLGSGKNCLVQSVPGELNMDH
TSVFEQASKTKGKTSLAELVNSLSWKEERAQHVLNHLVHEGMAWIDDQTPDGKRWFWFPA
LINKEL

Nucleotide sequence

Length: 1,170

>Moocci.CG.ELv1_2.S627462.g27003.01.t
TATTTAATTTATACAGTAGTTTCTTAATTTAAATTATATTATAGAAATATTCTGACTGAC
TGACTGATAAAAAAGAATAAAACAGTAACTTAAAAGAATGCGTAGAAGGGGGGTTGGTGC
TGGAGCTATTTCAAGAAAGAAACTCCAAGATGCTAAGTACAAAGCCCATGGAAATGAGCT
CGCAGCACAACAACTACAACAATTGAGTAATCAGCTGGAAGTTTTTCACAGCAATTTAGA
GGAGTTTGCCGCTAAACACAAACATGAAATCAAGAAAAATCCACAATTTCGACACCAATT
TCAGCAAATGTGTGCAGCTATAGGTGTTGATCCGCTGGCATCTGGTAAAGGATTCTGGTC
TGAAATGTTAGGTGTGGGTGATTTTTATTATGAATTAGGCGTTCAAGCTATAGAGATCTG
TATCGCTACAAGATTACATAATGGTGGAATTATGAAGCTACAGGAATTACATCAAAGGCT
AATGAAAACTAGAGGAAGGTACGGACAAGATATCTCCGAAGAAGATGTTATAACTGCATT
TAAAAAACTGAAGGTTCTTGGTACAGGGTTTACTTTGCTTGGGTCTGGCAAAAACTGTTT
AGTCCAATCGGTTCCTGGTGAATTAAATATGGATCATACAAGTGTTTTTGAGCAGGCATC
AAAGACCAAAGGCAAAACATCACTTGCAGAGTTGGTGAATTCCTTATCGTGGAAAGAAGA
AAGAGCACAGCATGTGCTCAACCACTTGGTGCATGAGGGAATGGCCTGGATCGATGATCA
AACTCCTGATGGAAAAAGATGGTTTTGGTTCCCAGCTTTAATAAACAAAGAACTATAAAC
TTTAAATTCATAACGAAAACTATTCAATTCCTAGAACTGGAATTAAATTACTCTTGGGCA
AAAGTAAACTGATGCATTTGAAGAAATCGTGTGGAGAAATTGAACATTGTACACTAAAGA
CCTTATTAAATTTGTTTTATTTATAATGACAATGTGATAAGTAGTTGTAGTTTGACTTGC
CGTATAGTCCAATTTTATCCGAAAAAATATATATGTTTTTCTTTTTTAGGCCTGTTATAT
TGATTATTTTAATTACATGTTTAGCAAAAATAGTTATTTAAAGAAATACATAACTTTTAA
ATTTTTTTTATTAAGATACATACTAACATA

InterProScan

PANTHER
ESCRT-2_cplx_Snf8 (IPR016689) - T[1-244] 9.5E-101
PIRSF
ESCRT-2_cplx_Snf8 (IPR016689) - T[2-246] 3.0E-94
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[24-175] 2.45E-50 - T[176-242] 6.46E-16
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[92-172] 2.3E-29 - T[173-246] 1.6E-23

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNF8_HUMAN 60.905 % 314 3.66E-109