- Transcript 'KH2012:KH.C4.351.v1....' >
- Transcript 'Moocci.CG.ELv1_2.S62...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S625694.g26821.01.t
Possible name(s)
RPS27A; UBB; UBC
Gene model
Location
S625694 [12,197 / 12,929]
Amino acid sequence
Length: 244
>Moocci.CG.ELv1_2.S625694.g26821.01.p
MQIFVKTLTGKTITLEVEASDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKT
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLE
Nucleotide sequence
Length: 732
>Moocci.CG.ELv1_2.S625694.g26821.01.t
ATGCAGATTTTCGTGAAAACTCTAACTGGAAAGACCATTACCTTGGAGGTTGAAGCATCT
GATACCATTGAAAATGTTAAGTCAAAAATTCAGGATAAAGAAGGAATTCCTCCAGATCAA
CAACGTTTGATCTTTGCTGGCAAACAGCTTGAAGATGGTCGCACTTTGAGTGATTATAAC
ATTCAAAAAGAATCCACTCTTCACTTGGTTCTAAGATTAAGAGGGGGAATGCAAATCTTT
GTAAAAACTCTCACTGGAAAGACCATCACTTTGGAGGTTGAGGCTTCAGATACCATCGAA
AATGTGAAAACCAAGATTCAAGACAAAGAAGGCATTCCTCCAGATCAACAACGTTTGATC
TTTGCTGGAAAACAATTGGAAGATGGTCGCACACTGAGTGACTACAACATCCAAAAAGAA
TCCACACTTCACTTGGTTCTGAGATTAAGAGGAGGAATGCAAATCTTTGTCAAAACCCTT
ACTGGAAAAACCATTACCTTGGAGGTTGAGGCTTCAGATACTATTGAAAATGTAAAGACC
AAGATTCAAGACAAAGAAGGAATTCCTCCAGATCAGCAACGTTTGATTTTTGCTGGCAAA
CAGTTGGAAGATGGTCGTACTTTGAGTGATTACAATATCCAAAAAGAATCCACACTTCAT
TTAGTTCTGAGATTGAGAGGAGGAATGCAAATATTTGTCAAAACTCTTACTGGAAAGACC
ATTACCTTGGAG
| SMART |
Ubiquitin_dom (IPR000626) - T[1-72] 3.6E-35 - T[77-148] 4.1E-35 - T[153-224] 4.1E-35 |
| ProSiteProfiles |
Ubiquitin_dom (IPR000626) - T[1-76] 30.692 - T[77-152] 30.648 - T[153-228] 30.648 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[1-76] 9.55E-34 - T[76-152] 3.52E-34 - T[152-228] 3.52E-34 |
| Pfam |
Ubiquitin_dom (IPR000626) - T[3-74] 2.8E-33 - T[79-150] 4.0E-33 - T[155-226] 4.0E-33 |
| PRINTS |
Ubiquitin (IPR019956) - T[11-31] 4.7E-38 - T[32-52] 4.7E-38 - T[53-74] 4.7E-38 |
| ProSitePatterns |
Ubiquitin_CS (IPR019954) - T[27-52] . - T[103-128] . - T[179-204] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL40_HUMAN | 96.104 % | 153 | 1.37E-47 |
| UBB_HUMAN | 96.943 % | 441 | 7.6E-160 |
| UBC_HUMAN | 97.541 % | 470 | 2.15E-164 |