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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Clone 'AHC0AAA149YI16' > 
  3. Transcript 'Harore.CG.MTP2014.S1...' > 
  4. Transcript 'Moocci.CG.ELv1_2.S62...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S623950.g26659.01.t

Possible name(s)

SNX30; SNX4; SNX7

Gene model

Moocci.CG.ELv1_2.S623950.g26659

Location

S623950 [53,738 / 59,711]

Sequences

Amino acid sequence

Length: 353

>Moocci.CG.ELv1_2.S623950.g26659.01.p
METYISYKVSMKTTRSSFDDCKYSVRRRYQDFVWLRQKLEESHPTHFIPPLPSKMIVKGM
VDRFTSEFVHTREIALDSFVKRIAEHPVLSCNEHLKVFLTAKAHEFTQHRKQNSAGYLSR
VGGSVKSVAASSKVKTRDSGFTEMASKVIKFKEKMSVVDRVADRLNQEQHELPFELQGYG
STYSMWAEAEQDEIAHLLNGFAKTLEICADSAEELSQNNRHKFMPPLKEYVLYCDSIEQV
LRRRDNLQAQRDRLTDELERKKEESENLPKADQSYSIGAMMGKNPAEVQQEKANKLAQNI
KELSEKQEKMSDNVDCANANIKADMERWDKNRITDIKKLFTELADSHLHHLSK

Nucleotide sequence

Length: 1,088

>Moocci.CG.ELv1_2.S623950.g26659.01.t
TTGGTAAACCTGAAAAGCATGCATTATCAATGGAAACGTATATTTCCTACAAAGTTTCAA
TGAAGACCACTCGTAGTTCGTTTGATGACTGTAAATATAGTGTTCGAAGAAGATACCAAG
ATTTTGTTTGGCTGCGACAAAAGTTAGAAGAATCTCACCCAACTCATTTTATTCCACCAC
TTCCATCAAAGATGATTGTTAAAGGAATGGTGGACAGATTTACATCTGAATTTGTCCACA
CTAGAGAAATTGCACTGGATAGTTTTGTGAAACGAATAGCTGAACATCCGGTGCTGTCTT
GCAATGAACATCTTAAAGTCTTCTTGACTGCTAAGGCACATGAATTCACACAGCATCGAA
AGCAGAACTCTGCTGGATACTTGTCCCGTGTTGGTGGGTCTGTAAAATCGGTGGCTGCAT
CATCTAAAGTTAAAACTAGAGACAGTGGATTTACTGAAATGGCATCAAAAGTTATAAAGT
TTAAAGAGAAAATGTCTGTTGTTGATCGGGTAGCAGATCGTTTGAATCAGGAACAACATG
AGCTACCGTTTGAGCTACAAGGATATGGATCAACATACTCAATGTGGGCCGAGGCTGAAC
AGGATGAAATTGCACACTTACTAAATGGTTTCGCTAAAACGCTTGAAATTTGTGCAGATT
CAGCTGAAGAACTCTCTCAGAACAACAGACATAAATTTATGCCACCATTAAAGGAATATG
TTCTATACTGTGATAGTATTGAGCAAGTACTACGACGTCGTGATAATTTACAAGCGCAAA
GAGACCGTTTAACGGATGAATTGGAGAGAAAAAAAGAGGAAAGTGAAAATCTTCCGAAAG
CTGATCAATCGTACTCCATTGGAGCCATGATGGGAAAGAATCCTGCTGAAGTGCAACAAG
AGAAGGCGAACAAGCTTGCACAAAATATTAAGGAGCTTTCCGAGAAACAAGAGAAGATGT
CAGACAACGTTGATTGTGCAAATGCTAATATAAAAGCCGATATGGAGCGATGGGACAAAA
ACAGGATTACCGACATCAAAAAACTGTTTACAGAACTTGCGGACAGCCACTTGCATCATT
TATCTAAG

InterProScan

ProSiteProfiles
Phox (IPR001683) - T[1-106] 19.206
SMART
Phox (IPR001683) - T[1-102] 2.4E-13
Gene3D
PX_dom_sf (IPR036871) - T[1-117] 2.0E-32
SUPERFAMILY
PX_dom_sf (IPR036871) - T[2-102] 1.06E-27
Pfam
Phox (IPR001683) - T[2-100] 4.9E-21
Pfam
Vps5_C (IPR015404) - T[124-349] 3.4E-16
Gene3D
AH/BAR_dom_sf (IPR027267) - T[131-353] 9.1E-40

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNX30_HUMAN 42.776 % 279 5.09E-91
SNX7_HUMAN 38.462 % 259 4.49E-84
SNX4_HUMAN 27.198 % 105 2.06E-25