- Transcript 'Moocci.CG.ELv1_2.S62...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S621540.g26448.01.t
Possible name(s)
LARP6; LARP7; SSB
Gene model
Location
S621540 [5,247 / 10,137]
Amino acid sequence
Length: 278
>Moocci.CG.ELv1_2.S621540.g26448.01.p
MEITTHESVADNQVTTVTPIDESLQPFELPSRRMQARIIQQVEYYFSDDYLARDAYFLRQ
IRRKKEGYLSTKLITNFKKVRKMVNDVRVTSYCLRKSTELQVNEEGTKVRRIKEVPQNIE
RFFEQHNNKTVAVSNIPRHHANMNHLMAHFRKYGELTSVKIIKAKKYTELPQHFQAEVEF
EKAESANKAVEDRDEVYKVRLLMCKFNIENNYNYKSNNNNKNNNSYNTDNNNYSNNNNNK
NFAIMDKNRDIKDNSYKGFVEANVATKHDNLQSVNNIS
Nucleotide sequence
Length: 837
>Moocci.CG.ELv1_2.S621540.g26448.01.t
ATGGAAATAACTACCCACGAATCGGTGGCTGATAATCAAGTGACAACCGTAACTCCAATC
GACGAGTCGCTTCAGCCTTTTGAACTACCCTCAAGAAGGATGCAAGCCAGAATCATACAA
CAAGTAGAGTATTACTTTTCGGACGACTACCTTGCCAGGGACGCTTATTTCCTCCGTCAA
ATAAGAAGAAAGAAGGAGGGATATCTAAGTACAAAGCTTATCACCAACTTCAAAAAGGTC
AGAAAAATGGTGAATGACGTAAGAGTGACGTCATACTGTTTACGAAAATCTACCGAGTTA
CAAGTAAATGAAGAAGGAACTAAAGTACGCAGAATAAAAGAAGTTCCCCAAAATATTGAA
AGATTCTTTGAACAGCACAACAACAAGACGGTTGCAGTGTCAAACATTCCCCGCCATCAC
GCCAACATGAACCACTTGATGGCGCATTTCAGAAAATATGGAGAATTAACTTCAGTCAAA
ATCATAAAGGCAAAGAAATACACTGAATTACCGCAGCATTTTCAAGCTGAAGTGGAGTTT
GAAAAAGCGGAATCAGCTAACAAAGCTGTCGAAGATCGAGATGAAGTGTACAAGGTGCGG
TTGTTGATGTGTAAATTCAACATTGAAAATAACTATAACTACAAAAGTAACAACAACAAC
AAAAACAATAACAGCTACAATACTGACAACAACAACTATAGCAACAATAACAACAATAAG
AATTTCGCAATAATGGATAAAAATAGAGACATAAAAGATAATAGTTATAAAGGATTCGTT
GAGGCAAATGTCGCTACAAAGCATGACAATCTACAATCAGTTAACAATATTTCTTGA
| ProSiteProfiles |
La_HTH (IPR006630) - T[28-119] 21.919 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[29-117] 4.44E-21 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[31-120] 4.3E-25 |
| SMART |
La_HTH (IPR006630) - T[32-112] 5.2E-22 |
| Pfam |
La_HTH (IPR006630) - T[38-95] 1.1E-15 |
| PRINTS |
Lupus_La (IPR002344) - T[41-58] 3.0E-6 - T[67-82] 3.0E-6 - T[98-111] 3.0E-6 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[122-230] 1.4E-10 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[128-237] 2.44E-12 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[129-209] 10.019 |
| Pfam |
RRM_dom (IPR000504) - T[133-194] 7.3E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LARP7_HUMAN | 31.515 % | 77.8 | 3.29E-16 |
| LARP6_HUMAN | 31.771 % | 102 | 1.24E-24 |