- Transcript 'KH2012:KH.C8.11.v3.R...' >
- Transcript 'KH2012:KH.C9.421.v1....' >
- Transcript 'KH2012:KH.C8.11.v3.A...' >
- Transcript 'KH2012:KH.C8.11.v2.A...' >
- Transcript 'Moocci.CG.ELv1_2.S61...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S619629.g26244.01.t
Possible name(s)
CSMD2; SELE; SELP
Gene model
Location
S619629 [10,643 / 12,960]
Amino acid sequence
Length: 749
>Moocci.CG.ELv1_2.S619629.g26244.01.p
MYFWLIKILIFSTIVNQSMSLHCWVCENAKGEADCRKKGYLKKCNHDEQACQVELRHHEG
WNFGPMITKRCKQALACDNNFIQNKRTAWWPTQCNPKFPTNSVCRCCCDHDNCNYLGLKC
WDGPTVCSPPHTSPQFGSVQCSNDANVDSECFFGCKKGFRIVGSETSTCTADLEWDQPAP
KCIPEFCIPLKQPPKYGHVICTNYNNIGSKCNYECEEGFIMIGPDKTTCQNDGQWSHSAP
RCEPIKCLPEHTKLDNGDVDCSNRMYIGSMCTFSCEIGFALIGSEVSNCLDDGNGDGVGK
WDFPAPNCRPIKCFPPQSNPAHGVVDCTDDNSLHNDGNRDTEGFWSRPAPVCLPIRCQPP
HNNPENGVVQCSQNNFLGSICTFVCEDRYSLVGSSTSVCIKGLGATGQWSQEQPTCKPIT
CPDGPGTPVNGHKVCTNGNILGSICEFACNEYHNREGALFSTCVSDNGGFPYWDQPVPQC
NPNTCKNQTLPHGNVECSNDNLATSTCTFHCIETDYELYPPETESNICLNSTIWDRPQPC
CARACPPYALMDLVIILDSSSSISLPNWDSMIKFVQGFVGDFMIGDDATYFGIFRYNRYV
DEDTQIMLNSNVNTTQVIADIASIPYDGSGTYTGNAISHAVDVILAKENGNREEVKDVVL
VITDGKSQDDVSEPAARLRATGAAVYALPINPPRGQLDMDQVLQITGDESTIIKDATVLG
FAALTAEFSVKLGKEICGNPCTHVRHNHD
Nucleotide sequence
Length: 2,250
>Moocci.CG.ELv1_2.S619629.g26244.01.t
ATGTATTTTTGGCTAATAAAGATTTTGATATTTTCAACTATCGTCAATCAATCTATGAGT
CTTCATTGCTGGGTTTGTGAAAATGCTAAAGGTGAAGCGGATTGCAGGAAGAAAGGATAC
CTGAAGAAATGCAATCATGATGAACAAGCTTGCCAAGTTGAACTTAGACATCACGAAGGA
TGGAATTTTGGACCGATGATAACCAAACGTTGCAAACAAGCACTTGCGTGTGATAACAAC
TTTATTCAGAATAAAAGAACCGCTTGGTGGCCGACACAATGCAATCCTAAGTTTCCGACG
AACTCTGTATGCCGCTGCTGTTGTGATCACGATAACTGCAATTACCTAGGCTTGAAATGT
TGGGACGGACCAACTGTTTGTTCTCCTCCACATACATCTCCTCAATTTGGTTCTGTCCAG
TGCTCCAATGACGCTAATGTTGATAGTGAATGTTTTTTTGGTTGCAAAAAAGGATTTAGG
ATTGTCGGATCTGAAACTTCAACCTGCACTGCTGATCTAGAATGGGACCAACCTGCACCA
AAATGTATTCCAGAGTTTTGCATTCCATTAAAACAACCGCCAAAGTATGGTCACGTAATA
TGCACTAATTACAATAACATAGGAAGCAAATGCAATTATGAATGTGAAGAAGGCTTTATC
ATGATTGGACCAGACAAAACCACCTGTCAGAATGATGGCCAATGGTCACACAGCGCACCA
AGATGTGAACCAATAAAATGTCTCCCAGAACATACAAAATTAGACAATGGCGATGTTGAC
TGTAGCAATCGTATGTATATTGGAAGCATGTGCACCTTCTCATGTGAAATCGGATTCGCG
TTGATAGGATCTGAAGTTTCCAATTGCTTGGATGATGGAAATGGAGATGGCGTTGGCAAG
TGGGATTTTCCTGCACCGAATTGCAGACCAATTAAATGTTTTCCGCCTCAATCTAATCCC
GCGCACGGAGTTGTCGATTGCACTGATGATAACTCACTGCACAATGATGGCAACCGCGAT
ACTGAGGGATTTTGGAGTAGACCAGCACCTGTATGTTTGCCAATTCGTTGTCAACCGCCA
CACAATAATCCAGAAAACGGGGTCGTTCAATGCAGCCAAAATAATTTCTTGGGTAGCATT
TGTACATTTGTATGCGAAGATCGATATTCACTTGTTGGGTCATCAACTTCTGTTTGTATA
AAAGGATTGGGAGCCACTGGGCAATGGAGTCAAGAACAACCAACCTGCAAACCTATTACA
TGCCCGGATGGTCCAGGCACTCCTGTTAATGGACATAAAGTATGCACAAATGGAAATATA
CTTGGATCGATTTGTGAATTCGCATGTAATGAATATCACAACCGTGAAGGCGCGTTATTT
AGTACGTGTGTTTCGGACAACGGAGGATTCCCTTACTGGGATCAACCAGTTCCACAATGC
AATCCCAACACATGCAAAAACCAAACCCTTCCACATGGCAATGTAGAGTGCTCCAATGAC
AATCTTGCAACATCCACTTGCACTTTTCATTGTATAGAGACTGATTATGAATTGTACCCA
CCTGAAACAGAATCTAATATCTGCTTAAACTCAACAATCTGGGATCGCCCACAACCTTGC
TGTGCTCGAGCTTGTCCTCCGTATGCTCTAATGGACTTGGTAATTATTTTAGACTCATCT
TCCTCTATTAGTCTACCTAACTGGGATAGTATGATAAAGTTTGTTCAAGGATTTGTTGGG
GACTTTATGATCGGTGATGATGCAACTTACTTTGGCATATTCCGTTACAATCGATACGTG
GATGAAGACACACAAATCATGCTTAACAGCAACGTTAATACAACCCAGGTCATCGCTGAT
ATTGCAAGTATTCCTTATGATGGATCGGGCACCTACACCGGAAATGCGATTTCTCATGCT
GTTGACGTTATCCTTGCTAAAGAAAATGGAAATCGAGAGGAAGTAAAAGATGTTGTCCTG
GTCATTACGGACGGAAAATCACAAGACGATGTCTCCGAACCTGCTGCGCGTCTCCGGGCG
ACTGGGGCCGCAGTATACGCCTTGCCAATTAACCCGCCACGCGGACAACTTGACATGGAT
CAAGTCCTTCAAATTACAGGAGACGAATCTACGATCATTAAAGATGCTACGGTACTTGGA
TTTGCAGCTTTAACGGCAGAATTTTCCGTCAAGTTGGGAAAAGAAATTTGCGGAAATCCT
TGCACACACGTTCGACATAACCATGACTAA
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[125-184] 9.515 - T[185-244] 10.25 - T[245-310] 9.017 - T[355-418] 10.167 - T[419-482] 7.008 - T[483-543] 6.77 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[127-183] 5.79006E-10 - T[187-243] 1.28811E-11 - T[249-309] 1.65846E-6 - T[357-417] 1.77172E-10 - T[421-480] 1.75346E-5 |
| Pfam |
Sushi_SCR_CCP_dom (IPR000436) - T[127-182] 4.8E-8 - T[191-242] 5.1E-11 - T[252-308] 8.8E-4 - T[357-416] 1.0E-7 |
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[127-192] 5.28E-12 - T[192-249] 7.09E-14 - T[253-317] 1.95E-11 - T[356-423] 4.59E-13 - T[420-491] 6.39E-10 - T[487-547] 6.53E-5 |
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[127-182] 1.1E-10 - T[187-242] 1.3E-12 - T[247-308] 3.3E-8 - T[357-416] 1.2E-11 - T[421-480] 1.6E-5 - T[485-541] 2.5 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[536-711] 8.58E-37 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[550-745] 5.6E-37 |
| SMART |
VWF_A (IPR002035) - T[550-731] 8.8E-22 |
| Pfam |
VWF_A (IPR002035) - T[552-710] 2.6E-30 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[552-736] 22.615 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LYAM3_HUMAN | 29.306 % | 152 | 3.5E-38 |
| CSMD3_HUMAN | 26.859 % | 129 | 1.19E-30 |
| LYAM2_HUMAN | 28.212 % | 136 | 1.73E-33 |