- Clone 'ciht018m10' >
- Region 'REG00000787' >
- Clone 'cima818697' >
- Region 'REG00000805' >
- Transcript 'Moocci.CG.ELv1_2.S61...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S618812.g26156.03.t
Possible name(s)
PAX3; PAX6; PAX7
Gene model
Location
S618812 [44,329 / 50,863]
Amino acid sequence
Length: 537
>Moocci.CG.ELv1_2.S618812.g26156.03.p
MMNTNFLPITKLISYLNHVDFSENHSNSDGGDAEDRSVDGCQDSDCESEPDLPLKRKQRR
SRTTFSADQLEELERCFERTHYPDIYTREELAQRTRLTEARVQVWFSNRRARWRKQMAAQ
QLPGLHHHPHLQHHIGYHSIAAAGMSAHNYMLQAAAAHQHAVQQHVPQQSTALSHVASGQ
HQHLGHPHINQSAGLGAHPDNSYIPTSTHESSLSQRHPAHGMHSLTSPLHHHPYSGPTAG
TMRYEGSHDVALNAAAAGYGLVGAAAAAARYQFPTAASFGDNYHHHAISPDNTLYAGNSN
PNENLPSSSTDNQENSEFRNRSASNVGVNASVRHPGESRSPSSSSSGSLSRQHQQRHGLS
LVNANQNTSGSGVVDVSGSTEINSSPPVSSEDNHVNNLATDSYPQQIGAHSFSTHVMDQS
APSSNGNPAAYPVGNPLLQRESTASSASVAPTYPGTSLSDGYPETSSSLTTAQYHPHNPF
ASCQYSSYGQAAEYGSSAGIAALRMKSREHSAALGLISVGGTGETLACRLTTNLKRI
Nucleotide sequence
Length: 1,614
>Moocci.CG.ELv1_2.S618812.g26156.03.t
ATGATGAACACTAACTTTCTGCCAATTACCAAATTGATTAGTTATCTTAACCACGTTGAT
TTTTCAGAAAACCATTCCAACTCAGACGGAGGTGATGCTGAAGATAGATCAGTGGACGGA
TGTCAGGACTCAGACTGCGAATCAGAACCAGATCTTCCTTTAAAGAGGAAGCAAAGACGA
AGCAGGACTACTTTTTCCGCTGATCAACTTGAAGAACTGGAAAGATGCTTTGAAAGAACA
CATTATCCTGATATTTACACAAGAGAAGAACTAGCACAAAGAACAAGATTAACGGAGGCT
AGAGTACAGGTATGGTTTAGCAACAGACGAGCAAGGTGGCGTAAACAAATGGCTGCACAG
CAACTTCCAGGATTACATCACCATCCTCATCTTCAACACCATATTGGATACCATTCCATA
GCAGCTGCAGGAATGTCGGCTCACAATTACATGCTTCAAGCTGCCGCCGCCCATCAACAC
GCCGTACAACAGCATGTACCACAACAATCAACAGCGCTTTCCCACGTCGCTAGTGGGCAG
CACCAACACCTGGGACATCCGCATATTAATCAATCTGCCGGTCTTGGTGCGCACCCTGAC
AATTCATACATTCCCACTTCGACTCATGAATCATCACTTTCCCAACGCCATCCAGCTCAT
GGAATGCATTCTTTAACGTCACCTCTTCATCACCATCCATATTCTGGTCCAACTGCAGGA
ACAATGCGTTATGAAGGATCACATGATGTTGCCCTAAACGCGGCTGCAGCAGGTTATGGC
CTCGTCGGAGCTGCGGCCGCGGCGGCAAGGTATCAGTTCCCAACGGCAGCATCATTTGGT
GACAACTACCACCATCACGCAATCTCTCCCGACAACACATTATATGCTGGAAATTCTAAC
CCCAACGAAAACCTACCAAGTTCGTCAACTGATAATCAAGAAAATAGCGAATTTCGAAAT
CGATCTGCTAGCAACGTGGGTGTGAATGCGTCAGTAAGACATCCTGGAGAAAGCAGGTCA
CCATCTTCTTCATCATCTGGATCTTTATCAAGGCAACATCAGCAAAGACACGGACTTTCA
TTAGTAAACGCCAACCAGAACACGTCTGGTTCAGGAGTAGTTGACGTATCAGGATCGACA
GAAATCAATTCCTCCCCTCCCGTTTCGAGCGAAGACAACCACGTAAACAATCTCGCGACA
GATTCTTATCCACAACAAATTGGAGCACATTCATTTTCTACTCATGTTATGGACCAATCA
GCTCCCAGCTCTAATGGAAATCCTGCAGCTTATCCAGTAGGAAATCCACTTCTTCAGAGA
GAGTCTACTGCTTCATCTGCAAGTGTTGCTCCCACATACCCAGGAACAAGTTTATCGGAT
GGATATCCTGAAACCTCGTCATCCTTAACAACTGCTCAATATCATCCGCATAACCCGTTT
GCGTCCTGCCAGTACTCATCATACGGACAAGCGGCGGAGTATGGTAGTTCGGCGGGAATC
GCAGCTCTTCGGATGAAATCGCGGGAACATAGCGCCGCTTTGGGGCTGATCAGCGTCGGC
GGAACCGGCGAAACTCTTGCCTGCCGTCTAACGACCAACTTGAAAAGAATTTGA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[51-122] 3.51E-27 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[56-116] 21.135 |
| SMART |
Homeobox_dom (IPR001356) - T[58-120] 8.7E-28 |
| Pfam |
Homeobox_dom (IPR001356) - T[59-115] 8.4E-23 |
| CDD |
Homeobox_dom (IPR001356) - T[59-117] 1.54935E-26 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[91-114] . |
| ProSiteProfiles |
OAR_dom (IPR003654) - T[498-511] 10.752 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARX_HUMAN | 63.441 % | 120 | 8.32E-29 |
| PAX7_HUMAN | 77.32 % | 160 | 5.22E-43 |
| PAX3_HUMAN | 81.395 % | 155 | 1.56E-41 |