- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Clone 'AHC0AAA251YA07' >
- Transcript 'Cisavi.CG.ENS81.R17....' >
- Transcript 'Moocci.CG.ELv1_2.S59...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S598177.g24463.01.t
Possible name(s)
FGD6; PLEKHF1; PLEKHF2
Gene model
Location
S598177 [11,712 / 16,209]
Amino acid sequence
Length: 278
>Moocci.CG.ELv1_2.S598177.g24463.01.p
MVERLANTEVNARRIGAMEQSFGSSGKSLADPNRVLVGEGVLTKLCRKKPKARQFFLCND
ILVYGTIVGKKKYSNQHIMPLVDIKIEEIPETSDPIVRMPDVSEGGSETLRNGWLIISPS
KSFAVYAQTAMEKQEWMSHMTRCIEDQRMKAGITEDPGETAPAWVPDVEAQSCMRCKKTK
FSAIQRRHHCRKCGYVVCSSCSGNKAVIPQQSSKPLRVCNTCFIEISSKDNTSTRVVTKK
GSLLKHMSTKPQSYSTFNTDFASAPKAVADSSDSDSSN
Nucleotide sequence
Length: 1,551
>Moocci.CG.ELv1_2.S598177.g24463.01.t
GGTTGACTGAGCAATTTACAGGTTTAGTTTAGTAAAATCATCTTACAGATGCTACAAAAT
GGTAGAGCGGCTCGCAAATACAGAAGTTAATGCTAGAAGAATTGGAGCAATGGAGCAGAG
TTTTGGGTCATCTGGAAAATCCCTTGCAGATCCGAATAGAGTTTTAGTCGGTGAAGGAGT
GCTTACTAAACTTTGCAGAAAGAAACCGAAGGCACGACAATTTTTTCTCTGCAATGATAT
TTTGGTTTATGGTACAATAGTTGGGAAAAAGAAATATAGTAATCAACACATCATGCCTTT
GGTTGATATTAAAATAGAAGAAATTCCTGAAACCTCAGATCCAATTGTAAGAATGCCCGA
TGTTTCTGAGGGAGGGTCTGAAACGCTGAGAAATGGATGGCTGATTATTTCACCTTCAAA
ATCATTTGCAGTGTATGCTCAAACAGCTATGGAAAAGCAAGAATGGATGTCCCACATGAC
AAGGTGTATTGAAGATCAGCGGATGAAAGCAGGCATTACTGAAGATCCAGGGGAAACTGC
TCCTGCCTGGGTTCCAGATGTTGAGGCCCAGTCCTGTATGAGATGCAAAAAAACTAAATT
TTCTGCAATTCAGCGTCGTCATCATTGTCGTAAATGTGGTTATGTTGTATGTTCCTCCTG
CTCAGGTAACAAAGCTGTAATACCACAACAATCGAGCAAACCTCTACGTGTTTGCAACAC
ATGTTTTATTGAAATATCTAGTAAGGACAACACATCGACCAGAGTTGTAACTAAAAAAGG
TTCTCTTCTGAAACATATGTCTACAAAACCTCAATCGTATTCAACATTTAACACCGACTT
TGCTTCTGCTCCAAAGGCTGTAGCGGATTCATCTGATTCAGATTCAAGCAATTAGGATTT
TATTATTTAATTTTATGAGTTTTTAAGCAAAATTTATATAATGTATCTTATTTGATTTAT
ACATGTGCACTTTTATTTGTAGAACTTTAATCTATAATACAAACCACAATTTTATTTAAT
GTATATACCACAGTATAAAACTTTTGTGTGGTGTTTATTTTATGTCATACTCCTAAAGTA
AAAAAAAACACCAATAGTTTTTAGAAGTTCAGATTTACTAATTTTTACTATACTTTTAAA
ATGTGAAATGAACAATATTTCCTACATTGTGATTTGATGCCAAATTGATTTTTAGTTTTT
ATTAGTTGAACCAAACAGTCAACACTTAAAAAAATTTTATTTTTAAAGCACTTATTAACT
TCAGTTTTTTTTTATGCAAATAAGAGTTATTAGCTAGCTATGTTATACTATATTATTTCT
ACTGTATTATTTTTTATTTAGTATGTATGTTTCGGTATTAGTGCAGTGCACATAGGTAGC
ACCCTGCTTGTAAATTTTAAAAATACAGAAAATTTAAGAAAAATTTTATTAATTCAGTTC
GTTACAGAAAGTAGATTTTTTAAACGTAAAATTAGCTTTGATTTTTTATCTCCTAAAACT
TACAAATACATGGTATATACACAATGTATAAAACTATACTTATATACTTAA
| CDD |
PH_Phafin (IPR037871) - T[7-143] 1.05434E-68 |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[27-142] 1.3E-20 |
| ProSiteProfiles |
PH_domain (IPR001849) - T[35-145] 9.125 |
| SMART |
PH_domain (IPR001849) - T[36-147] 8.7E-11 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[154-241] 4.3E-24 |
| SMART |
Znf_FYVE (IPR000306) - T[159-228] 4.3E-29 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[162-237] 8.63E-22 |
| Pfam |
Znf_FYVE (IPR000306) - T[163-227] 9.1E-19 |
| ProSiteProfiles |
Znf_FYVE-rel (IPR017455) - T[167-227] 12.586 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FGD6_HUMAN | 33.621 % | 127 | 8.25E-33 |
| PKHF2_HUMAN | 55.844 % | 269 | 9.47E-91 |
| PKHF1_HUMAN | 49.78 % | 232 | 6.21E-76 |