Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S589512.g23789.01.t

Possible name(s)

FCN3; FIBCD1; TNR

Gene model

Moocci.CG.ELv1_2.S589512.g23789

Location

S589512 [3,220 / 4,500]

Sequences

Amino acid sequence

Length: 234

>Moocci.CG.ELv1_2.S589512.g23789.01.p
MTNKDLQPIDCSSVTFRQSETWNKTGGVYIICPESYDKGIKVYCDVTTAGGGWLVFQRRM
DGSINFNRNWWAYVTGFGDPKREFWLGLEAVHKLTQDGNYELRIDMTDWRGNKTFAHYGL
FNVGGEETKYALYVKDFKGTSVAGDSLSWHNGRQFSSRDNVSDQSTGSCSNDWRHGWWYR
TCMDSNLNGKYLQDGLTRHGYGIVWKHYRGLSYSLKKTEMKFRKATHGQSKLKK

Nucleotide sequence

Length: 705

>Moocci.CG.ELv1_2.S589512.g23789.01.t
ATGACAAATAAAGACCTTCAACCAATTGACTGTTCTTCTGTGACTTTTCGTCAATCTGAA
ACTTGGAATAAAACCGGTGGTGTTTATATAATTTGCCCTGAAAGTTATGACAAAGGAATA
AAAGTTTATTGCGATGTCACAACTGCAGGTGGAGGTTGGCTCGTCTTTCAAAGACGCATG
GATGGTTCGATTAATTTCAACCGGAATTGGTGGGCATATGTTACCGGATTTGGCGATCCT
AAACGAGAATTTTGGCTAGGTTTAGAAGCAGTTCACAAATTAACTCAAGATGGAAACTAT
GAATTGCGTATTGACATGACCGATTGGCGAGGAAATAAAACTTTTGCGCATTATGGCTTG
TTTAATGTGGGTGGAGAAGAAACAAAATATGCTTTATACGTAAAAGATTTTAAAGGAACA
AGTGTGGCGGGGGATTCGTTGTCGTGGCATAACGGTCGCCAATTTTCGTCCCGTGATAAT
GTAAGCGATCAGTCAACTGGTAGCTGTTCTAATGATTGGAGACATGGTTGGTGGTACAGA
ACCTGTATGGACTCGAACCTTAATGGAAAGTATTTGCAAGACGGTTTGACTAGACACGGT
TACGGAATAGTTTGGAAACATTATAGAGGACTTTCATATTCTTTAAAGAAAACAGAGATG
AAGTTTAGAAAAGCTACACATGGTCAGTCAAAATTGAAAAAATAA

InterProScan

ProSiteProfiles	Fibrinogen_a/b/g_C_dom (IPR002181) - T[2-226] 56.754
SUPERFAMILY	Fibrinogen-like_C (IPR036056) - T[6-223] 7.85E-73
SMART	Fibrinogen_a/b/g_C_dom (IPR002181) - T[6-225] 1.7E-83
CDD	Fibrinogen_a/b/g_C_dom (IPR002181) - T[7-223] 4.11476E-95
Pfam	Fibrinogen_a/b/g_C_dom (IPR002181) - T[22-223] 7.6E-68
ProSitePatterns	Fibrinogen_CS (IPR020837) - T[177-189] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TENR_HUMAN	41.892 %	187	1.19E-54
FCN3_HUMAN	42.13 %	178	2.13E-55
FBCD1_HUMAN	44.843 %	188	2.67E-57