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- Transcript 'Moocci.CG.ELv1_2.S58...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S583855.g23368.02.t
Possible name(s)
RBPJ; RBPJL
Gene model
Location
S583855 [1,367 / 8,041]
Amino acid sequence
Length: 535
>Moocci.CG.ELv1_2.S583855.g23368.02.p
MYQAPSQLPTSDIKQSLKCTENNNLDMNSADSNVSMPRLSPQLKRPARQLTREAMRNYLE
ERPDQTLVVLHAKVAQKSYGNEKRFFCPPPCIYLMEKGWKRKQKRLEEDEQSAEAGQIHA
FIGIGSSDQEMQQLNLDGKNFCTAKTLYISDTDKRKHFMLSVKLFFGCGLEIGSFHSKRI
KVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENSNFHASSVQWGSFA
IHLLDDDESESEEFTVRDGYIHYGQTVKLVCTVTGMALPRLIIRKVDKQTTILNADDPVS
QLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKESNKEMINDGASWTIISTDKAEYTFC
DGMGPTSEPVTPVPTVHSLQLNGGGDVAMLEVNGENFTPNLKVWFGEVESETMYRCAEGL
LCVVPDISAFRTGWRWVEQSVQVSINLVRDDGIIYPTNLNFTFTPEPGPRQHCPAAANIL
HPKRPYDSKSEESLVEDRRENETHNKRPTMDNNQSIAQHSESINQKNSNMLRAIT
Nucleotide sequence
Length: 2,819
>Moocci.CG.ELv1_2.S583855.g23368.02.t
AGTAGAACTTGGTTATGTGTCATATTTATACTTCTAGATTAAAATAAAATTGCTAGCTTA
ATGCATCAAAAACAAGATGTATCAAGCTCCGTCACAATTACCAACTTCAGACATAAAACA
AAGTTTAAAATGTACAGAAAACAACAATTTGGATATGAATTCTGCTGATTCAAACGTATC
GATGCCAAGGTTATCTCCACAACTTAAACGACCAGCAAGGCAGCTCACACGGGAGGCAAT
GCGAAATTATCTTGAAGAAAGGCCTGATCAAACCTTGGTTGTGCTTCATGCAAAGGTTGC
CCAAAAATCATACGGCAATGAAAAAAGATTCTTTTGCCCTCCTCCTTGTATATATTTGAT
GGAGAAAGGTTGGAAGAGGAAGCAGAAACGTTTGGAAGAAGATGAACAAAGTGCTGAAGC
TGGTCAAATTCATGCTTTTATTGGAATTGGCAGCAGCGACCAAGAAATGCAACAGCTCAA
TTTAGATGGCAAGAACTTTTGCACTGCCAAAACATTGTACATATCAGATACTGACAAACG
AAAGCATTTTATGCTCAGTGTTAAACTCTTTTTTGGATGTGGTCTAGAAATAGGGAGTTT
TCACAGTAAAAGAATCAAAGTTATCAGCAAACCTTCCAAGAAAAAACAGTCTTTAAAGAA
TGCAGATTTATGCATTGCATCAGGAACCAAAGTTGCACTATTTAATCGACTGCGATCACA
AACTGTGAGCACAAGATATCTACATGTGGAAAACTCCAATTTTCATGCTAGTTCGGTTCA
GTGGGGTTCCTTTGCAATACATTTACTTGATGATGACGAATCTGAATCTGAAGAGTTTAC
TGTACGTGATGGTTACATTCATTATGGTCAAACTGTGAAGTTAGTTTGCACAGTTACAGG
AATGGCACTTCCAAGGCTAATTATTCGCAAGGTTGACAAGCAAACTACGATTTTAAATGC
AGATGATCCAGTCTCACAATTACACAAATGTGCATTTTACTTGAAAGATACTGAGAGAAT
GTACTTATGTTTATCACAAGAAAGAATTATACAATTTCAGGCTACTCCATGTCCTAAAGA
ATCAAATAAAGAAATGATAAATGATGGTGCTTCATGGACGATTATAAGCACTGATAAAGC
AGAATACACATTTTGTGATGGAATGGGTCCCACATCAGAACCTGTTACACCAGTTCCAAC
TGTTCATAGTTTACAGCTAAATGGTGGTGGCGATGTAGCAATGTTGGAAGTTAATGGTGA
AAATTTTACGCCGAATTTAAAAGTATGGTTTGGTGAAGTTGAATCAGAAACTATGTACAG
ATGTGCAGAGGGATTGTTATGTGTTGTACCCGATATTTCGGCTTTCAGAACAGGCTGGAG
ATGGGTGGAACAATCAGTTCAAGTAAGCATAAACTTAGTACGGGATGACGGAATAATTTA
CCCTACAAATCTAAATTTCACCTTTACGCCCGAACCGGGGCCTCGTCAGCATTGTCCAGC
AGCCGCTAATATTCTTCATCCGAAAAGACCCTATGACTCTAAATCAGAAGAATCTTTAGT
GGAGGACAGAAGGGAAAATGAAACACATAATAAAAGACCCACAATGGATAATAATCAATC
TATAGCACAACATTCCGAATCCATCAATCAAAAAAATTCAAATATGTTGAGGGCTATCAC
ATGATAAAGAAACATCCATATGGCTTCTTTTGAGAAAGAATGTTGATGTTGATTGACAGC
AGTCCGAGATAGAAACTGATTTTTGGAATAACTTTTACATTAGTTCGTTTGCGTCTTCAG
AAGTATTATTAGATCTCCTAATGCTTGCCACGTCAGTTATTGAAGGTTGTTGTATGCTGA
ACGTAAATATAAAAATACAGTAAATCAATTTTATATATTAATGTTTAAACAATTGTTATA
AATATTTTAACAATAGTTAAAAACTGTAACAGAAGTTAATTTTTTATCGTCAACAACATA
AAAATATGATTTATTATTATAGTATAATATTTTGTATCATGAACTAATCCAGATCGAACT
TATCTCGTTCTCATGCTATCAACTTTTTAACTTTTTGTAGCTTTGTTTCTTTCAAATTAA
TTCAATGCCAAATCTTAAGTACAAATTGTTCGATTATTTTTTTTATTTGAAAATCATTTA
TAAATTATCTCATTGCTAGGTATGAGATAGTTATATTATAAAAAAAATATTGTGAATATT
GAAATTACTTTTTAAACAAATCCAATTGCTTATAGTTTTAAAAAAACATTAATTACGATT
TTTATTTACAAAAACCAACCAACTATTTCAATGACAGAAAAATTTAGTTTATAATTAAAA
ACATATGCTTTTGGGAACAAGAAAAAAGTTTAATTTNNGGAAATACAAAATTATGAGTAT
TTTCCAATTTAAAATACGTATGCATCTTAAAATTGAACTGAGTAACCTAACACTACCTTG
CATTTGAACGTCAACTACTTCCTTTGAGCTGATAACAGCGCGTAAAATGCCTTATATTTG
TCTTCCACTGTGTTTTGTTTAACACTAACTACAATATTCTCTTATTTGTATTGTTTACAT
GTAAAAATTAAACGATTTTTTAAGTGGTACATTTAAATTAAGTTAAACCATGTTTTGTTT
AATCCTAATTGGATAGTCTATAGTTTTGGGTGAAATTTTTAGTGCAGTAATTGTGGATTT
TTTTCCTTTAATTTTTCAACTTTTGCGAAATTTTGATATAAAGTTTATATTATATTTTTT
GTTTTTAAAATAAAAAGTACATTGCATACATTAAACAATATATGTCATTCCAAAATAAA
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[49-197] 1.12E-60 |
| Gene3D |
RBP-J/Cbf11/Cbf12_DNA-bd_sf (IPR037095) - T[50-193] 2.6E-167 - T[352-372] 2.6E-167 |
| SMART |
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[66-197] 9.4E-81 |
| Pfam |
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[67-197] 6.7E-48 |
| SUPERFAMILY |
BTD_sf (IPR036358) - T[195-352] 2.88E-65 |
| Pfam |
Beta-trefoil_DNA-bd_dom (IPR015350) - T[198-347] 6.4E-73 |
| SMART |
Beta-trefoil_DNA-bd_dom (IPR015350) - T[198-347] 1.8E-90 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[353-465] 8.15E-37 |
| CDD |
RBP-Jkappa_IPT (IPR038007) - T[369-465] 1.09066E-63 |
| Gene3D |
Ig-like_fold (IPR013783) - T[374-467] 9.2E-39 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SUH_HUMAN | 81.839 % | 766 | 0 |
| RBPJL_HUMAN | 51.634 % | 492 | 8.75E-171 |