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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.777.v1....'
  2. Transcript 'Moocci.CG.ELv1_2.S58...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S583855.g23368.02.t

Possible name(s)

RBPJ; RBPJL

Location

S583855 [1,367 / 8,041]

Sequences

Amino acid sequence

Length: 535

>Moocci.CG.ELv1_2.S583855.g23368.02.p
MYQAPSQLPTSDIKQSLKCTENNNLDMNSADSNVSMPRLSPQLKRPARQLTREAMRNYLE
ERPDQTLVVLHAKVAQKSYGNEKRFFCPPPCIYLMEKGWKRKQKRLEEDEQSAEAGQIHA
FIGIGSSDQEMQQLNLDGKNFCTAKTLYISDTDKRKHFMLSVKLFFGCGLEIGSFHSKRI
KVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENSNFHASSVQWGSFA
IHLLDDDESESEEFTVRDGYIHYGQTVKLVCTVTGMALPRLIIRKVDKQTTILNADDPVS
QLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKESNKEMINDGASWTIISTDKAEYTFC
DGMGPTSEPVTPVPTVHSLQLNGGGDVAMLEVNGENFTPNLKVWFGEVESETMYRCAEGL
LCVVPDISAFRTGWRWVEQSVQVSINLVRDDGIIYPTNLNFTFTPEPGPRQHCPAAANIL
HPKRPYDSKSEESLVEDRRENETHNKRPTMDNNQSIAQHSESINQKNSNMLRAIT

Nucleotide sequence

Length: 2,819

>Moocci.CG.ELv1_2.S583855.g23368.02.t
AGTAGAACTTGGTTATGTGTCATATTTATACTTCTAGATTAAAATAAAATTGCTAGCTTA
ATGCATCAAAAACAAGATGTATCAAGCTCCGTCACAATTACCAACTTCAGACATAAAACA
AAGTTTAAAATGTACAGAAAACAACAATTTGGATATGAATTCTGCTGATTCAAACGTATC
GATGCCAAGGTTATCTCCACAACTTAAACGACCAGCAAGGCAGCTCACACGGGAGGCAAT
GCGAAATTATCTTGAAGAAAGGCCTGATCAAACCTTGGTTGTGCTTCATGCAAAGGTTGC
CCAAAAATCATACGGCAATGAAAAAAGATTCTTTTGCCCTCCTCCTTGTATATATTTGAT
GGAGAAAGGTTGGAAGAGGAAGCAGAAACGTTTGGAAGAAGATGAACAAAGTGCTGAAGC
TGGTCAAATTCATGCTTTTATTGGAATTGGCAGCAGCGACCAAGAAATGCAACAGCTCAA
TTTAGATGGCAAGAACTTTTGCACTGCCAAAACATTGTACATATCAGATACTGACAAACG
AAAGCATTTTATGCTCAGTGTTAAACTCTTTTTTGGATGTGGTCTAGAAATAGGGAGTTT
TCACAGTAAAAGAATCAAAGTTATCAGCAAACCTTCCAAGAAAAAACAGTCTTTAAAGAA
TGCAGATTTATGCATTGCATCAGGAACCAAAGTTGCACTATTTAATCGACTGCGATCACA
AACTGTGAGCACAAGATATCTACATGTGGAAAACTCCAATTTTCATGCTAGTTCGGTTCA
GTGGGGTTCCTTTGCAATACATTTACTTGATGATGACGAATCTGAATCTGAAGAGTTTAC
TGTACGTGATGGTTACATTCATTATGGTCAAACTGTGAAGTTAGTTTGCACAGTTACAGG
AATGGCACTTCCAAGGCTAATTATTCGCAAGGTTGACAAGCAAACTACGATTTTAAATGC
AGATGATCCAGTCTCACAATTACACAAATGTGCATTTTACTTGAAAGATACTGAGAGAAT
GTACTTATGTTTATCACAAGAAAGAATTATACAATTTCAGGCTACTCCATGTCCTAAAGA
ATCAAATAAAGAAATGATAAATGATGGTGCTTCATGGACGATTATAAGCACTGATAAAGC
AGAATACACATTTTGTGATGGAATGGGTCCCACATCAGAACCTGTTACACCAGTTCCAAC
TGTTCATAGTTTACAGCTAAATGGTGGTGGCGATGTAGCAATGTTGGAAGTTAATGGTGA
AAATTTTACGCCGAATTTAAAAGTATGGTTTGGTGAAGTTGAATCAGAAACTATGTACAG
ATGTGCAGAGGGATTGTTATGTGTTGTACCCGATATTTCGGCTTTCAGAACAGGCTGGAG
ATGGGTGGAACAATCAGTTCAAGTAAGCATAAACTTAGTACGGGATGACGGAATAATTTA
CCCTACAAATCTAAATTTCACCTTTACGCCCGAACCGGGGCCTCGTCAGCATTGTCCAGC
AGCCGCTAATATTCTTCATCCGAAAAGACCCTATGACTCTAAATCAGAAGAATCTTTAGT
GGAGGACAGAAGGGAAAATGAAACACATAATAAAAGACCCACAATGGATAATAATCAATC
TATAGCACAACATTCCGAATCCATCAATCAAAAAAATTCAAATATGTTGAGGGCTATCAC
ATGATAAAGAAACATCCATATGGCTTCTTTTGAGAAAGAATGTTGATGTTGATTGACAGC
AGTCCGAGATAGAAACTGATTTTTGGAATAACTTTTACATTAGTTCGTTTGCGTCTTCAG
AAGTATTATTAGATCTCCTAATGCTTGCCACGTCAGTTATTGAAGGTTGTTGTATGCTGA
ACGTAAATATAAAAATACAGTAAATCAATTTTATATATTAATGTTTAAACAATTGTTATA
AATATTTTAACAATAGTTAAAAACTGTAACAGAAGTTAATTTTTTATCGTCAACAACATA
AAAATATGATTTATTATTATAGTATAATATTTTGTATCATGAACTAATCCAGATCGAACT
TATCTCGTTCTCATGCTATCAACTTTTTAACTTTTTGTAGCTTTGTTTCTTTCAAATTAA
TTCAATGCCAAATCTTAAGTACAAATTGTTCGATTATTTTTTTTATTTGAAAATCATTTA
TAAATTATCTCATTGCTAGGTATGAGATAGTTATATTATAAAAAAAATATTGTGAATATT
GAAATTACTTTTTAAACAAATCCAATTGCTTATAGTTTTAAAAAAACATTAATTACGATT
TTTATTTACAAAAACCAACCAACTATTTCAATGACAGAAAAATTTAGTTTATAATTAAAA
ACATATGCTTTTGGGAACAAGAAAAAAGTTTAATTTNNGGAAATACAAAATTATGAGTAT
TTTCCAATTTAAAATACGTATGCATCTTAAAATTGAACTGAGTAACCTAACACTACCTTG
CATTTGAACGTCAACTACTTCCTTTGAGCTGATAACAGCGCGTAAAATGCCTTATATTTG
TCTTCCACTGTGTTTTGTTTAACACTAACTACAATATTCTCTTATTTGTATTGTTTACAT
GTAAAAATTAAACGATTTTTTAAGTGGTACATTTAAATTAAGTTAAACCATGTTTTGTTT
AATCCTAATTGGATAGTCTATAGTTTTGGGTGAAATTTTTAGTGCAGTAATTGTGGATTT
TTTTCCTTTAATTTTTCAACTTTTGCGAAATTTTGATATAAAGTTTATATTATATTTTTT
GTTTTTAAAATAAAAAGTACATTGCATACATTAAACAATATATGTCATTCCAAAATAAA

InterProScan

SUPERFAMILY
p53-like_TF_DNA-bd (IPR008967) - T[49-197] 1.12E-60
Gene3D
RBP-J/Cbf11/Cbf12_DNA-bd_sf (IPR037095) - T[50-193] 2.6E-167 - T[352-372] 2.6E-167
SMART
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[66-197] 9.4E-81
Pfam
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[67-197] 6.7E-48
SUPERFAMILY
BTD_sf (IPR036358) - T[195-352] 2.88E-65
Pfam
Beta-trefoil_DNA-bd_dom (IPR015350) - T[198-347] 6.4E-73
SMART
Beta-trefoil_DNA-bd_dom (IPR015350) - T[198-347] 1.8E-90
SUPERFAMILY
Ig_E-set (IPR014756) - T[353-465] 8.15E-37
CDD
RBP-Jkappa_IPT (IPR038007) - T[369-465] 1.09066E-63
Gene3D
Ig-like_fold (IPR013783) - T[374-467] 9.2E-39

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SUH_HUMAN 81.839 % 766 0
RBPJL_HUMAN 51.634 % 492 8.75E-171