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TRANSCRIPT CARD

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  1. Clone 'cien54016' > 
  2. EST 'FK176353.1' > 
  3. Transcript 'KH2012:KH.C6.272.v1....' > 
  4. Clone 'cicl049n12' > 
  5. Transcript 'Moocci.CG.ELv1_2.S58...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S581395.g23195.01.t

Possible name(s)

KHDC4

Gene model

Moocci.CG.ELv1_2.S581395.g23195

Location

S581395 [12,735 / 17,132]

Sequences

Amino acid sequence

Length: 477

>Moocci.CG.ELv1_2.S581395.g23195.01.p
MEASSYINTSRIGSSSKKKRSRFGVGPPVENIGKDKKNIQPPGVVHISSLGSKTKETEST
SQSTGIEFSALPCTTYPSYDAYEANKEKADPKEHARKIAAAAAAKINASLIAQGKIKPPD
PAAIKTPPSIITKKSLSSHPTAPPDLTKANTTVVPPVKATEITQNDDFFVSEVEINDVPI
GCRNYLTRTITQDKITTSTKAYVCTKGKYMSPAEKASDSSNEKPLYLHVQATNIEYVKSA
VERIKQIIGNHFQKKMGISTNQSPAQTQMKPCPPAPSVYPGFTPPVATTMQAPLPAAQFV
QEKVFIGMDDAPPSFDLKSRLLGVNYQNFNFISSETGAQVILRGRGSGYVEPTSGKESFE
SMYAFISHPNQQGIEAAKSLVLSLVATIQKDLTQLMGTPAYTTSNIGSNANSYYQNYQTM
PVPPPPPETVPALPKSIKRKFTEEVPNPSNVLGYTSVHGKMGLPSEPSKIDSYKKSR

Nucleotide sequence

Length: 2,108

>Moocci.CG.ELv1_2.S581395.g23195.01.t
TTTTATATTATTTAGTGGGCAAGTTCAATAACTTATTAAACCTACCTTAATTTATTTTAC
TAAATGGAAGCTAGTAGTTATATAAACACATCCCGGATTGGTTCTTCATCAAAGAAAAAG
CGAAGTCGATTTGGAGTTGGTCCACCAGTTGAAAATATTGGAAAGGATAAAAAAAATATA
CAGCCACCAGGAGTTGTCCATATTTCAAGTTTAGGCAGCAAAACCAAGGAAACAGAATCT
ACTTCTCAAAGCACAGGAATCGAATTTAGTGCTCTTCCTTGCACTACTTACCCTTCATAT
GATGCATATGAAGCAAATAAGGAAAAAGCTGATCCAAAAGAGCATGCAAGAAAAATAGCC
GCCGCTGCTGCTGCGAAAATAAATGCAAGTTTAATCGCACAAGGCAAGATTAAACCACCG
GACCCAGCGGCAATAAAGACCCCACCTTCTATCATAACTAAAAAATCGTTGAGTTCTCAT
CCAACAGCTCCCCCAGATCTTACAAAAGCAAACACTACAGTAGTTCCACCGGTAAAGGCA
ACTGAAATTACACAAAATGATGATTTTTTTGTCTCTGAAGTAGAAATAAATGATGTCCCA
ATTGGATGTAGGAACTACTTAACACGTACAATTACACAGGATAAAATCACAACCAGTACA
AAAGCATATGTTTGTACAAAAGGTAAATATATGTCACCAGCGGAAAAAGCAAGCGACTCG
TCCAATGAAAAACCTCTTTATCTACATGTGCAAGCAACAAATATTGAATATGTTAAAAGT
GCTGTTGAGAGAATTAAACAAATTATAGGTAACCACTTTCAAAAGAAGATGGGAATATCA
ACCAACCAGTCACCAGCTCAAACCCAGATGAAACCTTGCCCTCCAGCACCTAGTGTGTAC
CCGGGCTTTACTCCTCCAGTTGCAACAACTATGCAAGCTCCTCTTCCAGCTGCACAATTT
GTCCAAGAAAAAGTTTTTATTGGTATGGATGATGCACCACCATCATTCGATTTAAAATCA
AGGCTGCTTGGTGTCAATTATCAAAACTTTAATTTCATTTCCTCTGAAACGGGAGCTCAG
GTTATACTTAGAGGTAGGGGTTCGGGCTATGTGGAACCTACTTCTGGAAAAGAATCATTT
GAATCAATGTATGCATTTATCAGTCATCCTAACCAACAGGGAATCGAAGCTGCCAAATCA
CTTGTATTAAGTTTAGTTGCAACTATTCAAAAAGATCTTACCCAACTAATGGGTACACCT
GCCTACACCACTAGCAACATAGGATCAAATGCAAACTCTTATTACCAAAACTATCAAACA
ATGCCAGTACCCCCTCCCCCACCAGAAACGGTACCTGCCCTACCCAAATCAATCAAACGC
AAGTTCACAGAAGAAGTTCCAAACCCTAGCAATGTTCTTGGGTACACCTCAGTGCATGGT
AAAATGGGACTGCCTTCAGAACCATCCAAGATTGATTCGTACAAAAAATCTAGGTAAGAT
TATACAATTTTTTTATTTTATCAAAGTTGAATAGTAGCACCTATTATTATCTTTTTTGTT
CTTGTATCTAACCTTGTTTTCTTTTTATTTCTTCTCTGTGCGGTTTTCTGCACATTTTTA
TATTACATGTGTTGATGGGAACGTTAACTGCGTGAAGATTTAAAGTGGATCCAACCCCTC
CAGTCACTCCGCCAGATGACAAATCGACTGAAAAATCAACCTTTAAATCTCCTGCACTTC
CGTTTTGGATGACTCCATAAAACATTTTTCATGAATTCGTGAACCGTGGNNNNNNNNNNT
TTTTTTGCCGAATTTCAAAGTATGTATTGTGCCGCACGAAAACACTGAAGTAATTTTAAC
GAAAAATAGGCACAACTGCAGAATACAAGGCCCCCAAGGAGAAACGCACTGTAAGAGCAA
CTTAATGAAAGACAAGTATGTGCACATATGAGAACATTGACATTTTAGAAGAAAAGTGCA
ATGGTCGGCCCTATATTCTCCAGTTTCCCAAAAAATTATAAAGCACATACCAACGAATAG
CAACACTGACCATTTTGCTGAAAGTGCTTTTGTAGCAATAAAGGCCTATACAAATTTTAT
AATATGAA

InterProScan

PANTHER
RIK/BLOM7 (IPR031121) - T[81-437] 7.0E-81
Gene3D
KH_dom_type_1_sf (IPR036612) - T[299-398] 1.1E-31
SUPERFAMILY
KH_dom_type_1_sf (IPR036612) - T[311-393] 1.99E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
KHDC4_HUMAN 41.102 % 182 6.87E-51