- Transcript 'Moocci.CG.ELv1_2.S58...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S581361.g23190.01.t
Possible name(s)
HOXC4; HOXC5; MNX1
Gene model
Location
S581361 [22,230 / 24,685]
Amino acid sequence
Length: 487
>Moocci.CG.ELv1_2.S581361.g23190.01.p
MISARNHLPDAVTVRNMSAIMAANLSNRNERSSYESPVYDSSEDDPIHPESPGYQKRSSS
SSSLASLSPLSSSPQHFRNENVRSSLEEEAVNLSSKCSKSTDWDSKKCNGLKKCLKSSKF
GIDAILASPSSSQASKNSSDQNGLKIKRSASNEGWNYFYPRQNTTSESRKIQNGDSDSIK
RLCPSIDKDTSLIDVVNASPVSSKSYENSDHHVSPTLYSGIPKPHIDAFQTFFHPKRRSF
EHDGIESTNKSEDARLETAIPPMGLGQQYHGMHINQYAIAAAIAAAGFERNQLSSYAVPT
NIQQNTDEKTFRNESNDKDYTMDPSQHYPSLPQNPALYYPGSISPMLPGHPSFFGKYQFP
QPACTGMPAPMQHVGMSNPTAQQQVVAMEMLRSGRMFRDITEFAGHVHPGLLSRSRRPRT
AFTSQQLLELEKQFKQNKYLSRPKRFEVATNLCLTETQVKIWFQNRRMKWKRSKKENSEK
SDDENIV
Nucleotide sequence
Length: 1,464
>Moocci.CG.ELv1_2.S581361.g23190.01.t
ATGATAAGTGCCAGAAATCATTTGCCAGACGCTGTAACTGTACGAAATATGAGCGCAATC
ATGGCGGCAAATTTATCCAACAGAAACGAACGCAGTTCTTACGAAAGTCCTGTTTATGAT
TCCAGCGAAGACGATCCGATTCACCCGGAATCCCCGGGGTATCAAAAACGATCAAGTTCG
TCATCTTCTTTGGCGTCCTTATCACCATTGTCTTCCTCGCCACAGCACTTTCGTAACGAG
AATGTAAGATCGTCATTGGAAGAAGAGGCTGTAAATCTTTCCTCAAAGTGTTCTAAATCC
ACGGATTGGGACTCAAAAAAATGCAATGGACTGAAAAAATGTTTAAAAAGTTCCAAATTT
GGAATTGATGCAATCCTAGCGTCTCCTTCTTCATCCCAAGCAAGTAAAAACTCTTCAGAT
CAAAACGGTTTAAAAATTAAACGATCTGCAAGCAACGAGGGTTGGAATTACTTTTATCCG
CGACAAAATACAACTTCAGAATCTCGTAAAATACAAAATGGCGATAGCGATTCCATTAAA
AGATTATGTCCTTCCATCGATAAAGACACTTCTTTAATCGACGTAGTCAATGCTAGCCCA
GTAAGTTCAAAGTCCTATGAAAACAGTGACCACCACGTATCACCTACATTGTATTCTGGA
ATTCCCAAACCCCATATTGATGCTTTTCAAACCTTTTTCCACCCAAAAAGAAGATCATTC
GAACATGACGGAATCGAATCAACAAATAAATCTGAAGATGCTAGATTAGAGACTGCTATT
CCACCAATGGGACTGGGTCAGCAGTATCATGGAATGCATATTAACCAATATGCAATTGCA
GCTGCAATCGCTGCAGCCGGGTTTGAAAGAAATCAACTGAGTTCTTATGCAGTTCCGACT
AATATTCAACAAAATACAGATGAAAAAACTTTTCGTAACGAAAGCAATGATAAAGATTAC
ACAATGGACCCATCCCAACATTATCCAAGTTTACCCCAAAACCCAGCGTTGTACTACCCC
GGTAGTATATCCCCGATGTTACCAGGGCACCCATCGTTTTTTGGAAAATACCAATTTCCC
CAACCGGCATGTACAGGAATGCCTGCACCAATGCAGCACGTGGGAATGAGCAATCCAACA
GCGCAACAACAAGTAGTCGCTATGGAAATGTTAAGAAGTGGTCGCATGTTTCGGGACATC
ACAGAATTTGCAGGTCATGTTCATCCGGGTCTCTTAAGTCGTTCCAGACGACCAAGAACA
GCTTTTACTTCACAACAACTTCTCGAATTGGAAAAACAATTTAAGCAGAATAAATATCTG
TCAAGACCAAAACGATTTGAAGTCGCGACAAATCTATGTCTAACTGAAACACAGGTTAAA
ATTTGGTTTCAAAATAGAAGAATGAAATGGAAGCGAAGCAAAAAAGAAAACTCAGAAAAA
AGTGACGATGAAAACATCGTATAA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[405-475] 3.81E-25 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[413-473] 22.139 |
| SMART |
Homeobox_dom (IPR001356) - T[415-477] 8.3E-25 |
| CDD |
Homeobox_dom (IPR001356) - T[416-474] 6.60524E-23 |
| Pfam |
Homeobox_dom (IPR001356) - T[416-472] 6.1E-22 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[437-448] 9.2E-8 - T[452-462] 9.2E-8 - T[462-471] 9.2E-8 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[448-471] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXC4_HUMAN | 61.667 % | 90.9 | 1.44E-20 |
| MNX1_HUMAN | 65.934 % | 129 | 4.8E-33 |
| HXC5_HUMAN | 38.667 % | 93.6 | 8.54E-22 |
