- Transcript 'KH2012:KH.C9.38.v4.A...' >
- Transcript 'KH2012:KH.C1.144.v3....' >
- Clone 'cien230709' >
- Transcript 'Moocci.CG.ELv1_2.S57...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S578361.g22947.01.t
Possible name(s)
SGSM1; SGSM2; TBC1D15
Gene model
Location
S578361 [5,768 / 23,324]
Amino acid sequence
Length: 1,205
>Moocci.CG.ELv1_2.S578361.g22947.01.p
MGSAENVEDNHAEMVRCIKCQVKAIMEEAVTKKFVHEESSHVIRLCGTINSCMISKLKKR
YSGFLKTNKVANLFNNIGKTVPAVAELVVKIEEALEADAQSQRRLENTDFTKPLRQPHHL
KFFWVRMALTEKLLDKILDNLVQNSRKYYEKSAILADPVNGPLIASIMVGPCALDYTKMK
TTDHYWSDPPADELMQRQRLHSRNSSPNSPGKRPTLHMRYFNSDSMNGEKILHDENMLAA
SSFRDYVESLHQNSKTTLLYGKNNVVVQPKEDIGPIPGYLSLHQDVGSIFIKWTPNQLMN
NNNNPSNGHLHKQSAHYVDENRSYWKFIMSINIRDVVYLHCHQQQDKSGTVVFVGQDGVQ
HPPICFPPGGHLLAFLTCLEAALLPRGHLDPPLRSQRGKGKVFPRIRNGGSTSSSGSQIS
TGSQFSQSEIEEPTDFVFRVTLGNGTTCCSHVEHVYCIMTPKETDVMPLHFCLHVCKEKC
GFGLQYDDDDDEVFSIENDKEDKPNFHSCDALVSECTLHPSCTIKRSVFMKKNLRTKSII
LIPYVVRDKNNSFMKNHQKAKNSFIQNVQSRHQSWIRSRISYSDLQYLEDSPVPHAVDTY
NPLSTHHEFTFEHTNGSADIETARNRHANSTVYSNTSLKTLCDTMKRQIISRAFYGWLGY
SRQLSAVRTHLSALVNDEITQPCQPVNATVGVTKETWEQHLYNGKITNIKELMRHVYFGG
IDHDMRKTVWPFLLKHYPMDSTVDERNNLDLQTKINYEEIMTEWLAVEVIVKQREREAVN
LAKLSTGGTASTSSTSSFDHHRKQSTGTINEVFVSLDKDPPLSTVNSINEEEKAIHSSSP
DYSEYYIIKNEKSQPVNIGHRRKRTLLDMSTKSHTPYSSVSTDLTVSEDIVSSSLPSVTE
NSSSTDRRYLNKSNAAVNFKKSMNKHLRKQAIVESLDEASHEEEDTGFDSAADDVSMSSS
STEESVSSVQGFTYSSELLDDFGLNLHRIEKDVHRCDRNHIYFTVEGNLDKLRNVMCSYV
WKNLSVGYMQGMCDIAAPLLIIFDDESKVYSCFTHLMKRMGVNFPNGGAMDTHLANVRSL
LQVLDPELYEHMHQNGDYTHFYFCYRWFLLDFKRELSYKDDVFAVWERIWSAEYCSSNHF
GIFFALAMLNNYRNIILDNDMDFTDIIKFFNEMAERHDAKKIIKLAQNFVSDVQLMIHNR
KVTIM
Nucleotide sequence
Length: 3,790
>Moocci.CG.ELv1_2.S578361.g22947.01.t
TTGTTTTAAAAGATTTACTTATTTTAATACTAATTTCCCTTCTAGCAGTCTAGATACTGC
TACGAGAAACCTAATGTAATACCGGTCAGCCGGTACTGGTACGCTCACTAATTTGCTACT
TGAGGCAAACTGGCGGACGTCCGACAGTCCGACCAATTTCTAAAAGTTAAACATGGGTTC
CGCAGAAAACGTGGAAGATAACCATGCGGAAATGGTGCGGTGTATAAAGTGTCAAGTAAA
AGCTATAATGGAAGAGGCGGTTACTAAAAAATTTGTTCACGAAGAAAGCTCACATGTTAT
ACGTTTATGTGGAACTATCAATTCATGCATGATAAGCAAATTAAAAAAACGATATAGTGG
ATTTCTAAAAACGAATAAAGTTGCGAACTTGTTTAACAACATAGGTAAAACAGTACCTGC
TGTTGCTGAACTTGTTGTAAAAATTGAGGAAGCTTTGGAAGCGGATGCACAAAGCCAAAG
GCGTTTGGAAAATACTGATTTTACCAAACCATTACGCCAACCACATCACTTAAAGTTTTT
TTGGGTGAGAATGGCATTAACTGAAAAACTGTTGGATAAGATCTTGGATAATTTAGTGCA
AAATTCAAGAAAATACTACGAAAAATCAGCAATATTAGCAGACCCTGTAAATGGCCCACT
AATTGCATCAATTATGGTGGGGCCATGTGCATTGGACTACACCAAAATGAAAACTACAGA
TCATTACTGGTCAGATCCACCTGCTGATGAGCTTATGCAAAGACAAAGACTACATTCAAG
GAATTCTTCCCCAAATTCTCCTGGCAAAAGACCAACTTTACACATGCGTTATTTTAATTC
TGATTCAATGAATGGAGAAAAGATTTTGCATGATGAAAATATGCTTGCTGCCTCATCATT
TAGGGATTATGTTGAGTCTCTTCATCAAAATTCTAAAACCACCTTGTTATATGGAAAAAA
TAATGTGGTTGTGCAGCCGAAAGAAGATATAGGTCCAATTCCTGGTTACCTTTCTCTACA
CCAAGATGTTGGATCTATATTTATAAAATGGACACCGAACCAACTCATGAACAATAACAA
TAACCCAAGTAATGGGCATTTACACAAACAATCTGCACACTATGTTGATGAAAACAGATC
TTACTGGAAATTTATTATGAGCATAAATATTCGGGATGTGGTTTATCTACATTGTCATCA
GCAACAGGACAAAAGCGGCACAGTAGTTTTTGTTGGTCAGGATGGCGTCCAACACCCCCC
CATATGTTTTCCTCCTGGTGGTCATCTTTTAGCTTTTCTAACATGCTTGGAAGCAGCACT
TCTACCAAGAGGACACCTGGACCCACCATTAAGATCACAACGTGGAAAGGGCAAAGTTTT
TCCACGAATTCGAAATGGTGGTAGTACCAGTAGTTCTGGCAGTCAAATAAGTACTGGTAG
CCAGTTTAGCCAGTCAGAAATTGAAGAACCAACGGACTTTGTGTTTCGAGTCACTCTGGG
AAATGGTACCACTTGCTGTAGTCATGTTGAGCATGTTTATTGCATCATGACTCCCAAGGA
AACAGATGTCATGCCTTTGCATTTTTGTTTGCATGTTTGTAAAGAAAAGTGTGGATTTGG
TTTACAATATGATGATGATGATGATGAAGTTTTTTCTATTGAAAATGACAAAGAAGACAA
GCCTAATTTTCACTCCTGTGATGCGCTCGTTTCTGAATGCACTTTGCATCCTTCTTGCAC
GATAAAACGATCAGTTTTTATGAAAAAAAACTTACGGACAAAATCAATTATACTAATACC
TTATGTAGTGCGTGACAAGAACAATTCTTTTATGAAAAATCACCAAAAAGCTAAGAATAG
CTTCATACAGAATGTCCAAAGTAGACACCAGAGTTGGATTCGATCTCGAATTTCTTATTC
TGATCTTCAATATTTAGAAGATTCCCCTGTTCCTCATGCAGTCGATACATATAACCCTTT
GTCAACTCATCATGAGTTTACGTTTGAGCATACAAATGGGTCTGCTGATATAGAAACAGC
AAGAAACAGACATGCTAACTCAACTGTTTATTCGAATACATCGTTAAAAACCCTTTGTGA
CACAATGAAACGACAAATAATATCTCGTGCTTTCTATGGTTGGCTTGGCTACTCTCGACA
ATTATCAGCTGTAAGAACACATTTATCGGCATTAGTTAACGATGAAATCACTCAACCATG
CCAACCCGTCAATGCCACTGTTGGAGTTACCAAGGAAACATGGGAACAACATTTATATAA
TGGAAAGATAACAAATATTAAGGAGTTAATGAGGCATGTATATTTTGGGGGCATTGATCA
TGACATGCGGAAAACAGTTTGGCCGTTTTTACTAAAGCATTACCCAATGGATTCGACTGT
TGATGAAAGAAATAATCTGGATTTGCAGACTAAAATTAATTATGAAGAAATAATGACAGA
ATGGTTGGCTGTTGAGGTCATTGTAAAACAGCGTGAACGTGAAGCAGTGAACCTTGCAAA
ATTGTCAACTGGGGGAACAGCAAGCACCAGCTCAACTTCGAGTTTTGATCACCACCGAAA
ACAGTCAACTGGGACAATAAACGAAGTTTTTGTTTCACTTGATAAAGATCCCCCTTTGTC
AACTGTAAATTCTATAAATGAAGAAGAAAAGGCAATCCACTCGAGCTCTCCAGATTATTC
AGAATATTATATTATAAAAAATGAAAAATCTCAACCAGTTAATATTGGCCATCGCAGAAA
AAGAACTTTGTTAGATATGTCAACTAAAAGCCACACCCCATACTCTTCCGTTAGTACAGA
TTTAACAGTTAGTGAGGATATTGTGTCGAGTTCATTGCCAAGTGTAACTGAAAATTCTTC
AAGTACTGATCGACGATATTTAAATAAGTCTAATGCAGCTGTGAATTTCAAAAAGAGTAT
GAATAAGCATTTACGAAAACAAGCCATTGTAGAAAGTCTGGACGAAGCATCACACGAAGA
AGAAGACACTGGTTTTGATTCAGCAGCAGATGATGTCAGCATGAGCAGTAGCTCAACGGA
AGAATCAGTTTCATCAGTTCAAGGTTTTACTTATTCCTCTGAATTGTTGGATGACTTTGG
CCTGAATCTTCACCGCATTGAGAAAGATGTACATCGATGCGATCGGAACCACATTTACTT
TACGGTTGAAGGAAATCTTGACAAACTGCGGAATGTTATGTGCAGTTATGTTTGGAAAAA
TCTTAGTGTTGGATACATGCAGGGTATGTGTGATATTGCAGCACCCCTTTTGATTATATT
CGATGATGAGAGCAAAGTATACAGCTGCTTCACCCATCTTATGAAGAGGATGGGGGTAAA
CTTTCCAAATGGGGGGGCTATGGACACGCATCTTGCGAATGTCCGCTCATTATTACAGGT
TCTGGATCCAGAATTGTATGAACACATGCATCAAAATGGAGATTACACTCACTTTTACTT
CTGTTATCGTTGGTTTTTGTTAGATTTTAAAAGAGAATTGTCCTATAAAGACGATGTGTT
TGCTGTTTGGGAAAGGATATGGTCGGCTGAATATTGTTCGTCCAATCATTTTGGAATATT
TTTTGCTTTAGCGATGCTCAACAATTATCGAAATATTATTCTTGATAATGATATGGACTT
CACCGATATTATTAAGTTTTTTAATGAAATGGCTGAACGTCATGATGCCAAAAAGATCAT
AAAATTGGCGCAAAATTTTGTGTCTGATGTTCAACTGATGATCCATAATCGCAAAGTTAC
TATCATGTAA
| SUPERFAMILY |
Run_dom_sf (IPR037213) - T[11-192] 4.18E-21 |
| ProSiteProfiles |
Run_dom (IPR004012) - T[36-184] 16.897 |
| Pfam |
Run_dom (IPR004012) - T[44-181] 6.0E-24 |
| SMART |
Run_dom (IPR004012) - T[121-181] 4.3E-13 |
| CDD |
SGSM1/2 (IPR037745) - T[256-442] 2.12629E-78 |
| SUPERFAMILY |
Rab-GTPase_TBC_sf (IPR035969) - T[695-759] 8.37E-44 - T[972-1091] 8.37E-44 - T[1068-1188] 6.02E-28 |
| SMART |
Rab-GTPase-TBC_dom (IPR000195) - T[717-1160] 1.3E-33 |
| ProSiteProfiles |
Rab-GTPase-TBC_dom (IPR000195) - T[720-1133] 30.048 |
| Pfam |
Rab-GTPase-TBC_dom (IPR000195) - T[966-1156] 1.0E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SGSM1_HUMAN | 44.179 % | 508 | 2.02E-160 |
| SGSM2_HUMAN | 44.367 % | 488 | 1.65E-154 |
| TBC15_HUMAN | 30.233 % | 125 | 1.68E-29 |