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  1. Transcript 'Phmamm.CG.MTP2014.S4...'
  2. Transcript 'KH2012:KH.C13.29.v1....'
  3. Transcript 'KH2012:KH.C9.38.v4.A...'
  4. Transcript 'KH2012:KH.C1.144.v3....'
  5. Transcript 'Moocci.CG.ELv1_2.S57...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S578361.g22947.01.t

Possible name(s)

SGSM1; SGSM2; TBC1D15

Location

S578361 [5,768 / 23,324]

Sequences

Amino acid sequence

Length: 1,205

>Moocci.CG.ELv1_2.S578361.g22947.01.p
MGSAENVEDNHAEMVRCIKCQVKAIMEEAVTKKFVHEESSHVIRLCGTINSCMISKLKKR
YSGFLKTNKVANLFNNIGKTVPAVAELVVKIEEALEADAQSQRRLENTDFTKPLRQPHHL
KFFWVRMALTEKLLDKILDNLVQNSRKYYEKSAILADPVNGPLIASIMVGPCALDYTKMK
TTDHYWSDPPADELMQRQRLHSRNSSPNSPGKRPTLHMRYFNSDSMNGEKILHDENMLAA
SSFRDYVESLHQNSKTTLLYGKNNVVVQPKEDIGPIPGYLSLHQDVGSIFIKWTPNQLMN
NNNNPSNGHLHKQSAHYVDENRSYWKFIMSINIRDVVYLHCHQQQDKSGTVVFVGQDGVQ
HPPICFPPGGHLLAFLTCLEAALLPRGHLDPPLRSQRGKGKVFPRIRNGGSTSSSGSQIS
TGSQFSQSEIEEPTDFVFRVTLGNGTTCCSHVEHVYCIMTPKETDVMPLHFCLHVCKEKC
GFGLQYDDDDDEVFSIENDKEDKPNFHSCDALVSECTLHPSCTIKRSVFMKKNLRTKSII
LIPYVVRDKNNSFMKNHQKAKNSFIQNVQSRHQSWIRSRISYSDLQYLEDSPVPHAVDTY
NPLSTHHEFTFEHTNGSADIETARNRHANSTVYSNTSLKTLCDTMKRQIISRAFYGWLGY
SRQLSAVRTHLSALVNDEITQPCQPVNATVGVTKETWEQHLYNGKITNIKELMRHVYFGG
IDHDMRKTVWPFLLKHYPMDSTVDERNNLDLQTKINYEEIMTEWLAVEVIVKQREREAVN
LAKLSTGGTASTSSTSSFDHHRKQSTGTINEVFVSLDKDPPLSTVNSINEEEKAIHSSSP
DYSEYYIIKNEKSQPVNIGHRRKRTLLDMSTKSHTPYSSVSTDLTVSEDIVSSSLPSVTE
NSSSTDRRYLNKSNAAVNFKKSMNKHLRKQAIVESLDEASHEEEDTGFDSAADDVSMSSS
STEESVSSVQGFTYSSELLDDFGLNLHRIEKDVHRCDRNHIYFTVEGNLDKLRNVMCSYV
WKNLSVGYMQGMCDIAAPLLIIFDDESKVYSCFTHLMKRMGVNFPNGGAMDTHLANVRSL
LQVLDPELYEHMHQNGDYTHFYFCYRWFLLDFKRELSYKDDVFAVWERIWSAEYCSSNHF
GIFFALAMLNNYRNIILDNDMDFTDIIKFFNEMAERHDAKKIIKLAQNFVSDVQLMIHNR
KVTIM

Nucleotide sequence

Length: 3,790

>Moocci.CG.ELv1_2.S578361.g22947.01.t
TTGTTTTAAAAGATTTACTTATTTTAATACTAATTTCCCTTCTAGCAGTCTAGATACTGC
TACGAGAAACCTAATGTAATACCGGTCAGCCGGTACTGGTACGCTCACTAATTTGCTACT
TGAGGCAAACTGGCGGACGTCCGACAGTCCGACCAATTTCTAAAAGTTAAACATGGGTTC
CGCAGAAAACGTGGAAGATAACCATGCGGAAATGGTGCGGTGTATAAAGTGTCAAGTAAA
AGCTATAATGGAAGAGGCGGTTACTAAAAAATTTGTTCACGAAGAAAGCTCACATGTTAT
ACGTTTATGTGGAACTATCAATTCATGCATGATAAGCAAATTAAAAAAACGATATAGTGG
ATTTCTAAAAACGAATAAAGTTGCGAACTTGTTTAACAACATAGGTAAAACAGTACCTGC
TGTTGCTGAACTTGTTGTAAAAATTGAGGAAGCTTTGGAAGCGGATGCACAAAGCCAAAG
GCGTTTGGAAAATACTGATTTTACCAAACCATTACGCCAACCACATCACTTAAAGTTTTT
TTGGGTGAGAATGGCATTAACTGAAAAACTGTTGGATAAGATCTTGGATAATTTAGTGCA
AAATTCAAGAAAATACTACGAAAAATCAGCAATATTAGCAGACCCTGTAAATGGCCCACT
AATTGCATCAATTATGGTGGGGCCATGTGCATTGGACTACACCAAAATGAAAACTACAGA
TCATTACTGGTCAGATCCACCTGCTGATGAGCTTATGCAAAGACAAAGACTACATTCAAG
GAATTCTTCCCCAAATTCTCCTGGCAAAAGACCAACTTTACACATGCGTTATTTTAATTC
TGATTCAATGAATGGAGAAAAGATTTTGCATGATGAAAATATGCTTGCTGCCTCATCATT
TAGGGATTATGTTGAGTCTCTTCATCAAAATTCTAAAACCACCTTGTTATATGGAAAAAA
TAATGTGGTTGTGCAGCCGAAAGAAGATATAGGTCCAATTCCTGGTTACCTTTCTCTACA
CCAAGATGTTGGATCTATATTTATAAAATGGACACCGAACCAACTCATGAACAATAACAA
TAACCCAAGTAATGGGCATTTACACAAACAATCTGCACACTATGTTGATGAAAACAGATC
TTACTGGAAATTTATTATGAGCATAAATATTCGGGATGTGGTTTATCTACATTGTCATCA
GCAACAGGACAAAAGCGGCACAGTAGTTTTTGTTGGTCAGGATGGCGTCCAACACCCCCC
CATATGTTTTCCTCCTGGTGGTCATCTTTTAGCTTTTCTAACATGCTTGGAAGCAGCACT
TCTACCAAGAGGACACCTGGACCCACCATTAAGATCACAACGTGGAAAGGGCAAAGTTTT
TCCACGAATTCGAAATGGTGGTAGTACCAGTAGTTCTGGCAGTCAAATAAGTACTGGTAG
CCAGTTTAGCCAGTCAGAAATTGAAGAACCAACGGACTTTGTGTTTCGAGTCACTCTGGG
AAATGGTACCACTTGCTGTAGTCATGTTGAGCATGTTTATTGCATCATGACTCCCAAGGA
AACAGATGTCATGCCTTTGCATTTTTGTTTGCATGTTTGTAAAGAAAAGTGTGGATTTGG
TTTACAATATGATGATGATGATGATGAAGTTTTTTCTATTGAAAATGACAAAGAAGACAA
GCCTAATTTTCACTCCTGTGATGCGCTCGTTTCTGAATGCACTTTGCATCCTTCTTGCAC
GATAAAACGATCAGTTTTTATGAAAAAAAACTTACGGACAAAATCAATTATACTAATACC
TTATGTAGTGCGTGACAAGAACAATTCTTTTATGAAAAATCACCAAAAAGCTAAGAATAG
CTTCATACAGAATGTCCAAAGTAGACACCAGAGTTGGATTCGATCTCGAATTTCTTATTC
TGATCTTCAATATTTAGAAGATTCCCCTGTTCCTCATGCAGTCGATACATATAACCCTTT
GTCAACTCATCATGAGTTTACGTTTGAGCATACAAATGGGTCTGCTGATATAGAAACAGC
AAGAAACAGACATGCTAACTCAACTGTTTATTCGAATACATCGTTAAAAACCCTTTGTGA
CACAATGAAACGACAAATAATATCTCGTGCTTTCTATGGTTGGCTTGGCTACTCTCGACA
ATTATCAGCTGTAAGAACACATTTATCGGCATTAGTTAACGATGAAATCACTCAACCATG
CCAACCCGTCAATGCCACTGTTGGAGTTACCAAGGAAACATGGGAACAACATTTATATAA
TGGAAAGATAACAAATATTAAGGAGTTAATGAGGCATGTATATTTTGGGGGCATTGATCA
TGACATGCGGAAAACAGTTTGGCCGTTTTTACTAAAGCATTACCCAATGGATTCGACTGT
TGATGAAAGAAATAATCTGGATTTGCAGACTAAAATTAATTATGAAGAAATAATGACAGA
ATGGTTGGCTGTTGAGGTCATTGTAAAACAGCGTGAACGTGAAGCAGTGAACCTTGCAAA
ATTGTCAACTGGGGGAACAGCAAGCACCAGCTCAACTTCGAGTTTTGATCACCACCGAAA
ACAGTCAACTGGGACAATAAACGAAGTTTTTGTTTCACTTGATAAAGATCCCCCTTTGTC
AACTGTAAATTCTATAAATGAAGAAGAAAAGGCAATCCACTCGAGCTCTCCAGATTATTC
AGAATATTATATTATAAAAAATGAAAAATCTCAACCAGTTAATATTGGCCATCGCAGAAA
AAGAACTTTGTTAGATATGTCAACTAAAAGCCACACCCCATACTCTTCCGTTAGTACAGA
TTTAACAGTTAGTGAGGATATTGTGTCGAGTTCATTGCCAAGTGTAACTGAAAATTCTTC
AAGTACTGATCGACGATATTTAAATAAGTCTAATGCAGCTGTGAATTTCAAAAAGAGTAT
GAATAAGCATTTACGAAAACAAGCCATTGTAGAAAGTCTGGACGAAGCATCACACGAAGA
AGAAGACACTGGTTTTGATTCAGCAGCAGATGATGTCAGCATGAGCAGTAGCTCAACGGA
AGAATCAGTTTCATCAGTTCAAGGTTTTACTTATTCCTCTGAATTGTTGGATGACTTTGG
CCTGAATCTTCACCGCATTGAGAAAGATGTACATCGATGCGATCGGAACCACATTTACTT
TACGGTTGAAGGAAATCTTGACAAACTGCGGAATGTTATGTGCAGTTATGTTTGGAAAAA
TCTTAGTGTTGGATACATGCAGGGTATGTGTGATATTGCAGCACCCCTTTTGATTATATT
CGATGATGAGAGCAAAGTATACAGCTGCTTCACCCATCTTATGAAGAGGATGGGGGTAAA
CTTTCCAAATGGGGGGGCTATGGACACGCATCTTGCGAATGTCCGCTCATTATTACAGGT
TCTGGATCCAGAATTGTATGAACACATGCATCAAAATGGAGATTACACTCACTTTTACTT
CTGTTATCGTTGGTTTTTGTTAGATTTTAAAAGAGAATTGTCCTATAAAGACGATGTGTT
TGCTGTTTGGGAAAGGATATGGTCGGCTGAATATTGTTCGTCCAATCATTTTGGAATATT
TTTTGCTTTAGCGATGCTCAACAATTATCGAAATATTATTCTTGATAATGATATGGACTT
CACCGATATTATTAAGTTTTTTAATGAAATGGCTGAACGTCATGATGCCAAAAAGATCAT
AAAATTGGCGCAAAATTTTGTGTCTGATGTTCAACTGATGATCCATAATCGCAAAGTTAC
TATCATGTAA

InterProScan

SUPERFAMILY
Run_dom_sf (IPR037213) - T[11-192] 4.18E-21
ProSiteProfiles
Run_dom (IPR004012) - T[36-184] 16.897
Pfam
Run_dom (IPR004012) - T[44-181] 6.0E-24
SMART
Run_dom (IPR004012) - T[121-181] 4.3E-13
CDD
SGSM1/2 (IPR037745) - T[256-442] 2.12629E-78
SUPERFAMILY
Rab-GTPase_TBC_sf (IPR035969) - T[695-759] 8.37E-44 - T[972-1091] 8.37E-44 - T[1068-1188] 6.02E-28
SMART
Rab-GTPase-TBC_dom (IPR000195) - T[717-1160] 1.3E-33
ProSiteProfiles
Rab-GTPase-TBC_dom (IPR000195) - T[720-1133] 30.048
Pfam
Rab-GTPase-TBC_dom (IPR000195) - T[966-1156] 1.0E-34

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SGSM1_HUMAN 44.179 % 508 2.02E-160
SGSM2_HUMAN 44.367 % 488 1.65E-154
TBC15_HUMAN 30.233 % 125 1.68E-29