Aniseed - Transcript Card

Transcript 'Moocci.CG.ELv1_2.S57...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S577568.g22872.01.t

Possible name(s)

KCNA1; KCNA2; KCNA6

Gene model

Moocci.CG.ELv1_2.S577568.g22872

Location

S577568 [9,182 / 12,572]

Sequences

Amino acid sequence

Length: 217

>Moocci.CG.ELv1_2.S577568.g22872.01.p
MTNRRHNSGIYFTKLRVLGKTLISSVGELAILVFFIFIAMIVFSTVVYFCEANSGEDNKF
DSIPSSFWWAVVTMTTVGYGDLVPRTVLGKIVGFICAITGVLCIALPVPAIVNNFVKQME
IMERKNKKQDRIEALKNQNNNDNHAEDGAISHILLHDRNTDECVIKIFFYFLNVIKVITF
SISSKGSVADANVNNKTRLRNDINVIRDYNVAMQLSR

Nucleotide sequence

Length: 654

>Moocci.CG.ELv1_2.S577568.g22872.01.t
ATGACAAACCGGAGACATAATAGCGGCATATATTTTACAAAATTGCGAGTATTGGGGAAG
ACATTGATATCATCTGTTGGTGAATTGGCGATATTGGTCTTCTTCATATTCATAGCCATG
ATCGTTTTCTCTACAGTAGTTTACTTCTGCGAGGCAAATTCGGGGGAGGACAACAAGTTC
GATTCTATTCCGTCTTCTTTTTGGTGGGCCGTTGTCACCATGACTACAGTAGGGTACGGT
GACTTAGTGCCAAGAACTGTTCTCGGTAAAATTGTTGGGTTTATATGTGCCATTACCGGT
GTGTTGTGCATCGCGCTACCGGTACCAGCTATCGTAAACAACTTTGTCAAACAAATGGAA
ATAATGGAGAGAAAAAACAAGAAACAAGACCGTATAGAGGCGCTAAAGAACCAAAACAAT
AACGATAATCACGCAGAAGATGGTGCAATTAGTCATATTTTATTACACGATAGAAATACT
GACGAATGTGTTATTAAAATATTTTTTTATTTTTTAAATGTCATAAAAGTTATCACATTC
TCTATTTCTTCAAAAGGAAGTGTTGCCGATGCCAACGTTAACAATAAAACGAGGCTACGA
AACGACATAAATGTTATCAGGGATTACAATGTAGCCATGCAATTATCACGATAG

InterProScan

PANTHER	VG_K_chnl (IPR028325) - T[11-138] 9.9E-50
Pfam	Ion_trans_dom (IPR005821) - T[12-118] 7.2E-19
PRINTS	VG_K_chnl (IPR028325) - T[28-51] 4.2E-37 - T[60-82] 4.2E-37 - T[89-115] 4.2E-37
PRINTS	K_chnl_volt-dep_Kv (IPR003968) - T[28-42] 1.3E-8 - T[100-111] 1.3E-8

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
KCNA1_HUMAN	59.459 %	139	9.18E-39
KCNA2_HUMAN	60.36 %	142	9.52E-40
KCNA6_HUMAN	62.162 %	142	9.77E-40