- Transcript 'Cisavi.CG.ENS81.R54....' >
- Transcript 'Phfumi.CG.MTP2014.S9...' >
- Transcript 'Moocci.CG.ELv1_2.S51...' >
- Transcript 'Cisavi.CG.ENS81.R54....' >
- Transcript 'Moocci.CG.ELv1_2.S54...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S549080.g21286.01.t
Possible name(s)
CSMD3; SELP; SVEP1
Gene model
Location
S549080 [10,746 / 14,211]
Amino acid sequence
Length: 1,154
>Moocci.CG.ELv1_2.S549080.g21286.01.p
MAINLKFCAKILVLVAAFETVNSIRCWECHNAKGEEECLKLGKLRNCESSEEACQVEVRH
HEGWGFGAMITKRCKQAHACENNLAQNNAHAWFPTQCNPKFPTNSVCRCCCYTDECNYNG
LECNIEANEPDMRSEPMAKQPIAMALPKPRDCPEIVQLVNSEIKCTNEFKESSQCAFKCK
VGFRIEGKQVLTCRLGKWNNDLPVCLPNPTCNPVPTTPENGILQCSNNYNIGSVCQFQCT
NGFEIFGNEKITCLENGKWDKAPPICKDRNCPLASKALINGKVQCSKESKVGSICTFQCD
SNFSLNGTTSMICKEDGTWDNKIPTCIRQVCIPQVAPPNGKFNCSNESSFGSECKFYCET
GFKLVGYQKTTCTDQETWDNETPFCLRKSCRPQTAPSNGRIICKDESNVGSQCQFECEPG
FALVGPLTINCTDEETWDQDPPICKSVNCTPKPRSPKEGIINCNDGNNIGSKCIFDCKVG
FQLVGQADSVCMENGSWSNESPLCIKRSCTDPDAPTNGFISCLDNLNGKRECFFECNSSY
KLVGAKNLICADAGNWNNQPPMCKTVCDPPQIAPFNGTVDCSNKNFNGSRCTFTCDDTHY
ISDVDVTTCQENGEWTEKPPLCLPKFCVPAHESPENGDIKCSPNTNVGSSCVFSCKMGYA
LIGSTKSTCNVKGADGDFLAIWSEPAPTCKRVMCYPKRFDFEYGKVNCTDENSVNSKCKF
ECNPGFKLDGNPHSICQDDGNGDELGVWSDIPPRCRPIQCLPEQKSPENGYVNCSQHNLL
GTNCEFSCFNDYQIVGSKEITCNHREGLNDIGLWSDSSPTCGKKACTNEIAKPEKGRVSC
SDNNYINSVCSFTCKESYKLIGDATSVCVELNEEMQWSGTVPMCIYIPSCENQILPHGKV
TCSNSNKIDSICEFQCMEENYQIYPSGADWNVCTNDTEWNRPKPCCARTCPPFAVMDLIL
ILDSSSSMGGYNFGKVKQFVQMFVSRFEISEDAAKFGVFRFNKEIDTETQILLSQNIDVS
QVTYDIDNIPYDGSGTHTGKAINHTVNVMLSKENGNREKVKDIVVIITDGKSQDDISEPA
RRLHETGALVYALPISPPKGKLDMKQIEEITGDGGRVIKTAFEEGFEALTNEFSYKLGEK
ICGNPCDHVTHDHD
Nucleotide sequence
Length: 3,465
>Moocci.CG.ELv1_2.S549080.g21286.01.t
ATGGCGATTAATTTGAAATTTTGTGCAAAAATATTAGTTCTAGTTGCAGCATTTGAAACG
GTTAATTCAATAAGATGTTGGGAATGCCACAACGCTAAAGGTGAAGAGGAATGTCTTAAA
CTAGGGAAGCTTAGAAATTGTGAAAGCAGCGAAGAAGCATGTCAGGTTGAAGTAAGACAC
CATGAAGGATGGGGATTCGGTGCGATGATCACAAAACGATGCAAGCAAGCCCATGCCTGT
GAGAACAACTTAGCCCAGAACAACGCACATGCCTGGTTCCCAACCCAATGCAACCCGAAG
TTTCCAACTAATTCAGTTTGTAGATGTTGTTGTTATACGGATGAATGTAATTATAATGGT
TTAGAATGTAACATTGAAGCAAACGAGCCAGACATGAGATCAGAGCCAATGGCTAAACAA
CCCATCGCTATGGCCTTACCCAAGCCACGAGATTGTCCTGAAATAGTACAACTTGTTAAT
TCAGAAATTAAATGCACCAACGAATTTAAAGAAAGCAGTCAATGCGCGTTTAAGTGCAAG
GTTGGTTTTAGAATCGAGGGAAAGCAAGTTTTAACCTGTCGCCTTGGAAAATGGAATAAT
GATTTGCCAGTTTGTTTACCAAATCCAACTTGTAACCCAGTGCCGACTACTCCTGAAAAT
GGAATATTACAGTGTTCGAATAACTACAATATAGGAAGCGTTTGTCAGTTTCAATGTACC
AATGGTTTCGAAATTTTTGGAAATGAGAAGATCACTTGCTTGGAAAATGGAAAATGGGAT
AAAGCACCGCCTATTTGTAAAGACAGAAATTGCCCTTTAGCATCCAAAGCTCTCATCAAT
GGCAAAGTCCAATGTTCTAAGGAATCTAAAGTTGGAAGCATTTGTACATTTCAATGCGAC
TCAAATTTTTCCCTAAATGGTACAACATCAATGATTTGCAAAGAAGATGGAACTTGGGAT
AACAAAATTCCAACGTGTATTAGACAAGTATGCATTCCCCAAGTAGCTCCACCTAATGGC
AAGTTTAACTGTTCCAATGAATCAAGTTTTGGAAGTGAATGCAAATTTTATTGTGAAACA
GGCTTTAAGTTGGTAGGATATCAAAAAACAACATGCACAGACCAGGAAACTTGGGATAAT
GAAACTCCATTTTGTCTTAGAAAATCTTGTCGACCACAGACAGCACCATCTAACGGCCGA
ATTATTTGTAAAGATGAATCCAATGTTGGAAGCCAATGTCAATTTGAGTGTGAACCAGGT
TTTGCGTTAGTAGGACCATTGACAATAAATTGTACAGACGAAGAAACTTGGGATCAAGAC
CCACCTATTTGCAAGAGTGTAAACTGTACTCCCAAACCAAGGTCCCCAAAAGAAGGAATC
ATAAATTGTAATGACGGAAATAACATTGGGAGTAAATGTATATTTGATTGCAAAGTTGGA
TTCCAACTGGTAGGACAGGCAGACAGCGTATGTATGGAAAATGGATCTTGGAGCAACGAA
TCACCTTTGTGTATAAAGCGTTCATGCACAGACCCTGATGCGCCAACTAACGGCTTTATC
TCATGTTTAGATAATCTTAATGGAAAACGAGAATGCTTTTTCGAATGTAACTCGAGTTAT
AAACTAGTCGGGGCGAAGAATCTAATATGTGCAGATGCAGGAAATTGGAATAATCAACCG
CCTATGTGTAAAACAGTTTGTGACCCGCCACAAATTGCCCCGTTTAATGGAACAGTGGAC
TGCTCAAACAAAAACTTCAACGGAAGTAGATGTACATTTACATGTGACGATACTCATTAT
ATATCAGATGTTGATGTTACGACATGTCAAGAGAATGGAGAATGGACAGAGAAACCTCCA
CTATGTTTGCCCAAATTTTGCGTTCCGGCCCACGAGTCTCCTGAAAACGGTGATATCAAA
TGTTCACCCAATACCAATGTGGGCAGTTCATGCGTCTTTTCTTGTAAAATGGGATATGCC
CTAATAGGTTCAACAAAATCTACATGCAATGTCAAAGGAGCAGATGGGGATTTCTTGGCA
ATTTGGAGTGAACCAGCCCCAACATGCAAACGCGTTATGTGCTACCCTAAACGCTTTGAC
TTTGAATACGGCAAAGTAAATTGTACGGATGAAAATAGCGTTAACAGTAAATGTAAATTT
GAATGTAATCCTGGATTTAAATTAGACGGGAATCCTCATTCTATATGCCAAGATGATGGG
AACGGTGATGAACTTGGTGTTTGGAGTGACATCCCTCCACGTTGCAGACCTATCCAGTGT
TTACCGGAACAGAAAAGTCCAGAAAATGGTTACGTAAACTGCTCACAACATAACTTGTTA
GGGACCAACTGCGAATTTTCTTGCTTTAATGATTACCAGATTGTAGGATCAAAAGAAATA
ACATGCAATCACAGAGAAGGGTTAAATGACATAGGATTATGGAGCGACTCATCACCAACT
TGTGGCAAAAAAGCGTGTACGAACGAAATAGCGAAGCCAGAAAAAGGTCGAGTAAGCTGT
AGTGACAACAACTACATTAACTCTGTGTGCAGTTTCACGTGTAAGGAATCGTACAAGCTA
ATTGGAGATGCAACCAGTGTTTGTGTTGAATTGAACGAAGAAATGCAATGGAGTGGGACA
GTTCCTATGTGCATTTATATACCAAGTTGTGAAAATCAAATTCTCCCCCATGGTAAAGTT
ACATGTTCAAACTCCAACAAAATCGATTCAATTTGCGAGTTTCAATGCATGGAAGAAAAT
TACCAGATTTATCCAAGCGGAGCTGATTGGAATGTTTGTACCAATGATACCGAATGGAAC
CGACCAAAACCGTGCTGTGCCCGTACCTGTCCACCATTTGCAGTTATGGACTTAATACTA
ATATTGGATTCGTCATCTTCAATGGGTGGCTATAATTTTGGAAAAGTGAAACAATTTGTT
CAAATGTTTGTAAGTCGTTTTGAAATCTCGGAAGATGCTGCAAAATTTGGCGTGTTCAGA
TTCAACAAAGAAATTGATACAGAAACACAGATTCTGCTGAGCCAAAACATTGATGTAAGT
CAAGTCACTTATGACATTGATAACATTCCATACGATGGATCTGGAACACATACAGGAAAA
GCAATCAACCACACTGTTAATGTTATGTTATCAAAAGAGAATGGAAACAGAGAAAAAGTA
AAAGATATCGTCGTTATAATTACAGACGGAAAATCTCAAGACGATATCAGTGAACCAGCT
AGGAGACTACATGAAACCGGTGCCTTAGTATACGCTTTGCCCATCTCTCCTCCAAAGGGT
AAATTGGATATGAAACAAATAGAAGAAATAACAGGTGATGGTGGTAGAGTGATAAAAACA
GCGTTTGAGGAAGGATTTGAAGCTTTAACTAATGAATTTTCCTACAAATTGGGAGAGAAA
ATATGTGGAAATCCTTGTGATCATGTCACACACGATCACGACTAA
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[149-206] 1.15E-9 - T[213-273] 1.24E-14 - T[278-340] 1.53E-13 - T[330-399] 8.06E-13 - T[389-452] 1.08E-13 - T[443-505] 5.28E-12 - T[508-577] 1.67E-12 - T[632-696] 3.89E-12 - T[701-762] 1.0E-11 - T[755-821] 5.14E-9 - T[832-898] 1.81E-11 - T[890-951] 9.59E-7 |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[150-207] 9.142 - T[209-268] 11.317 - T[269-328] 10.219 - T[329-387] 9.452 - T[388-446] 10.353 - T[447-506] 10.032 - T[507-565] 9.846 - T[566-624] 7.816 - T[625-691] 8.707 - T[692-757] 8.489 - T[758-823] 8.624 - T[824-886] 8.883 - T[888-948] 7.557 |
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[152-205] 6.2E-9 - T[211-266] 2.1E-12 - T[271-326] 1.1E-10 - T[331-385] 4.1E-11 - T[390-444] 2.5E-11 - T[449-504] 1.6E-8 - T[509-563] 9.3E-9 - T[567-622] 1.2E-8 - T[627-689] 1.3E-9 - T[694-755] 2.2E-9 - T[760-821] 4.3E-8 - T[826-884] 6.3E-8 - T[890-946] 1.4 |
| Pfam |
Sushi_SCR_CCP_dom (IPR000436) - T[152-205] 4.8E-6 - T[213-266] 6.6E-12 - T[278-326] 4.6E-8 - T[336-385] 7.2E-8 - T[390-444] 1.9E-10 - T[451-504] 2.0E-8 - T[509-563] 4.7E-7 - T[567-622] 4.2E-8 - T[632-689] 3.6E-5 - T[700-755] 2.4E-7 - T[833-884] 2.1E-5 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[152-205] 1.36572E-5 - T[213-267] 1.03132E-12 - T[280-327] 6.00165E-10 - T[331-385] 2.93754E-10 - T[390-445] 3.82595E-10 - T[451-505] 5.70634E-9 - T[509-564] 1.50707E-7 - T[567-622] 2.90304E-9 - T[629-690] 1.62907E-9 - T[702-756] 3.32935E-8 - T[767-821] 5.36914E-6 - T[833-885] 2.00295E-7 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[608-632] 3.42E-43 - T[941-1142] 3.42E-43 |
| SMART |
VWF_A (IPR002035) - T[955-1130] 4.7E-27 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[955-1150] 3.6E-40 |
| Pfam |
VWF_A (IPR002035) - T[957-1116] 5.1E-33 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[957-1141] 26.296 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SVEP1_HUMAN | 25.856 % | 249 | 2.41E-67 |
| LYAM3_HUMAN | 30.192 % | 259 | 5.86E-73 |
| CSMD3_HUMAN | 25.193 % | 229 | 5.83E-61 |