- Transcript 'Harore.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.C5.431.v1....' >
- Transcript 'Harore.CG.MTP2014.S7...' >
- Transcript 'Phmamm.CG.MTP2014.S9...' >
- Transcript 'Moocci.CG.ELv1_2.S54...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S548031.g21206.01.t
Possible name(s)
GRWD1; RBBP4; RBBP7
Gene model
Location
S548031 [9,599 / 11,420]
Amino acid sequence
Length: 302
>Moocci.CG.ELv1_2.S548031.g21206.01.p
AAMVLHRGCVNRVRTTRHGGRHLAATWSEKSTVNLWDLTKQLNATEGSQQLQNFVKNQQK
KCLPLYTFTGHMDEGYGMDWSPTESGNLLTGDCKAHIHLWKPREDGSWHIDQRPFASHTD
SVEDIQWSPNEKTVFMTCSADKTVKVWDTRAKPSSACMLTVQAHESDVNVINWNKHEPFI
VSGGDDAMIKVWDLRQIKSEKPIASFKHHTKSITSVEWHPTESSVFAASSSDDQVTQWDL
AVEPVSANETKLDPKLKDIPPQLLFIHQGQTDVKEVHWHPQIPGLLISTAQSGVNVFKTI
SV
Nucleotide sequence
Length: 909
>Moocci.CG.ELv1_2.S548031.g21206.01.t
GCTGCGATGGTTCTACATAGAGGATGTGTAAACAGAGTCCGAACTACAAGACATGGCGGA
AGACACTTGGCAGCAACATGGTCTGAAAAGAGTACAGTTAACTTGTGGGATCTAACAAAA
CAATTAAACGCTACAGAAGGGTCTCAACAATTACAAAACTTTGTAAAAAATCAACAAAAG
AAATGCTTACCATTGTATACTTTTACAGGTCACATGGATGAAGGTTATGGTATGGATTGG
AGTCCAACTGAGTCTGGGAATTTATTGACAGGTGACTGCAAAGCACATATCCATCTTTGG
AAACCTCGTGAAGATGGGTCATGGCATATTGATCAGCGACCATTTGCATCACATACCGAC
TCGGTTGAAGATATTCAGTGGTCTCCTAATGAAAAAACTGTTTTTATGACTTGCTCTGCT
GATAAAACTGTAAAAGTTTGGGACACTAGAGCTAAACCATCATCTGCTTGCATGCTTACT
GTTCAAGCACATGAATCTGATGTTAATGTTATTAACTGGAATAAACATGAACCTTTTATA
GTAAGTGGTGGAGATGATGCAATGATAAAGGTGTGGGATCTTCGCCAAATAAAAAGTGAA
AAACCTATTGCGAGTTTTAAACATCATACTAAATCTATTACCTCTGTTGAATGGCACCCA
ACAGAAAGCAGTGTATTTGCTGCATCTAGCTCAGATGATCAAGTCACTCAGTGGGATTTA
GCAGTTGAGCCTGTGAGTGCAAATGAAACTAAACTAGATCCAAAACTAAAAGACATTCCA
CCACAGTTGCTATTTATCCACCAAGGCCAAACTGATGTCAAGGAAGTTCACTGGCATCCC
CAAATTCCAGGCTTATTAATTTCTACAGCGCAATCTGGTGTTAATGTTTTTAAAACAATA
AGCGTGTAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-301] 3.5E-81 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[5-299] 6.26E-47 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[24-38] 1.6E-6 - T[135-149] 1.6E-6 - T[180-194] 1.6E-6 |
| SMART |
WD40_repeat (IPR001680) - T[61-101] 0.038 - T[111-148] 2.4E-6 - T[154-193] 6.0E-7 - T[199-239] 1.7E-7 - T[260-298] 29.0 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[68-248] 31.138 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[115-150] 13.483 - T[161-202] 14.585 - T[206-240] 11.444 |
| Pfam |
TIF_beta_prop-like (IPR013979) - T[119-231] 1.4E-7 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[180-194] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GRWD1_HUMAN | 56.436 % | 382 | 4.19E-132 |
| RBBP7_HUMAN | 29.831 % | 132 | 1.36E-35 |
| RBBP4_HUMAN | 30.64 % | 137 | 1.9E-37 |