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  1. Transcript 'Moocci.CG.ELv1_2.S54...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S541615.g20756.01.t

Possible name(s)

SLCO1B3; SLCO1C1; SLCO2A1

Location

S541615 [13,761 / 18,140]

Sequences

Amino acid sequence

Length: 708

>Moocci.CG.ELv1_2.S541615.g20756.01.p
MQSLRPTPTNRSRSSSKVREVDKCFVKYFYTVKTFVFFLTSFQLVNLLTLTYTDSVLNYI
AKRFRIPNTMASFIPSSYMIGSVVSVLPVSYIGSGWHRPRAISVGVVIMVFGLGLCILPH
FIISETHITNSSASILCRRSKISILRHLSTPVELPCNQNSSFYNPSLLLILGHFLIGSGS
SPLWPLGVAYLDDHIPARKMPIYLGIFVGTTLTGPVGGFLLGSVSSAIYVSSNLRKLTPK
DPQWIGAWWLGYVIAAALLVLLLVPFCYFPPSLPLSDEKSAEKIQLQLEKDKHKQNLKLR
CLLYQLDEKEEVRNISELPLIEDNPGTASECSESSSLLRNSPASRITSFFQGAVLATKQI
LMKPVAVGCIVAYTALANLLAGVTTFGSTYIQREFNVLRITSDMLIGGLCVPLAILGTIG
GGYIVKTYNLTLKNIILFNIIMSSIGVVFFISLFPIGCNLPRIAGLPLLLQNKPTIRYFL
CPKVKFGTRLVFLCNSGYVSCLTFKLILITRESNLMNFNATCNFGCNCTKGQIKLVCGND
NITYISPCYAGCTSEYHSKKHSSYKYEKCGCIHTLESKATLGPCKVHGCTIRLVVFMFIG
AIAITSLCFCQAPSYSALLRVLADANKPYGIGIMTIISRLLGFIPAPIWFASIIDRSCIY
RGEKCNGRSVCKLYDNAGLRNNYVAACVMCGIVYSLVDKRDFKLKPIH

Nucleotide sequence

Length: 2,127

>Moocci.CG.ELv1_2.S541615.g20756.01.t
ATGCAAAGTTTAAGGCCTACTCCAACCAATCGGTCCAGATCTTCTTCGAAAGTAAGGGAA
GTTGACAAGTGTTTTGTTAAATACTTTTATACTGTCAAGACGTTTGTGTTCTTTTTAACA
AGTTTTCAACTGGTAAATTTGCTGACTCTGACTTATACCGACAGTGTGTTGAATTATATC
GCAAAAAGGTTTCGAATTCCAAACACAATGGCATCATTTATTCCAAGCAGTTATATGATT
GGATCAGTTGTTTCTGTATTACCAGTATCGTACATTGGTTCTGGATGGCACAGACCAAGG
GCAATTAGTGTAGGGGTTGTTATTATGGTGTTTGGATTGGGATTATGTATTTTACCGCAT
TTCATAATATCAGAAACCCACATAACCAACTCATCGGCAAGTATTTTATGCAGAAGGTCG
AAAATCAGTATTCTTAGACATTTATCGACCCCGGTGGAACTTCCTTGTAACCAAAACTCT
TCTTTTTACAACCCTTCATTGCTTCTAATATTAGGTCACTTTTTAATTGGATCGGGATCT
TCGCCACTTTGGCCACTTGGCGTTGCATATTTAGACGACCATATTCCTGCCAGGAAGATG
CCTATATACTTGGGTATATTTGTCGGAACAACATTAACAGGACCGGTTGGTGGATTTTTA
TTAGGGAGCGTTAGCTCTGCTATTTACGTTTCAAGTAACTTACGAAAACTTACTCCTAAA
GATCCACAGTGGATCGGAGCTTGGTGGCTAGGCTATGTCATTGCTGCAGCTTTGCTGGTT
TTGTTGCTTGTTCCATTCTGCTATTTTCCGCCAAGTTTACCTTTATCAGACGAGAAAAGT
GCTGAAAAAATTCAATTACAACTTGAAAAGGATAAGCATAAACAAAACCTAAAGTTAAGG
TGTTTACTTTACCAGCTTGATGAAAAAGAGGAAGTACGTAATATTTCCGAATTACCGTTA
ATAGAAGATAATCCGGGAACTGCCTCCGAATGCAGCGAATCGTCGTCGCTTTTGCGAAAT
AGTCCTGCGAGCAGAATTACGTCATTTTTTCAAGGAGCTGTTTTAGCAACGAAGCAGATT
CTAATGAAGCCTGTTGCAGTAGGATGCATTGTTGCCTACACAGCATTGGCGAATCTGCTT
GCCGGGGTCACAACTTTTGGATCAACCTACATCCAACGAGAGTTCAATGTATTGCGCATT
ACGTCTGACATGCTGATTGGTGGTCTATGTGTTCCTCTAGCAATTTTGGGAACCATAGGA
GGCGGATATATAGTTAAAACCTATAACTTGACTTTAAAGAATATCATTTTATTTAACATC
ATAATGTCCTCTATCGGAGTGGTGTTTTTTATAAGTCTTTTTCCGATTGGGTGCAATCTT
CCGCGTATTGCTGGCCTACCATTATTACTTCAAAATAAGCCAACAATCAGATATTTTTTA
TGTCCAAAAGTGAAATTTGGGACACGTTTGGTTTTTCTCTGCAATTCTGGTTACGTTTCT
TGTCTGACTTTTAAACTTATATTAATAACTAGAGAGTCAAATTTGATGAATTTCAACGCT
ACTTGCAATTTCGGATGCAACTGCACAAAAGGTCAAATAAAATTGGTATGCGGCAATGAC
AACATTACATACATATCTCCATGTTATGCAGGTTGCACATCCGAATACCACAGTAAAAAA
CACTCAAGTTATAAATATGAAAAATGTGGTTGCATCCATACTTTGGAATCCAAAGCGACG
TTGGGACCATGTAAAGTACATGGATGCACTATTCGTCTCGTTGTGTTTATGTTTATCGGT
GCCATAGCCATCACATCTTTGTGTTTCTGCCAAGCTCCATCTTACTCGGCTTTGTTGCGA
GTTCTAGCAGATGCCAACAAACCTTACGGTATTGGCATAATGACCATTATATCGCGTTTA
TTAGGGTTTATTCCTGCTCCTATCTGGTTCGCATCAATAATTGATAGAAGCTGCATCTAC
CGAGGTGAAAAATGTAATGGCAGATCAGTTTGTAAGCTGTATGACAACGCCGGACTCCGC
AACAATTACGTAGCTGCTTGCGTGATGTGTGGAATTGTTTACTCTCTTGTAGATAAAAGA
GATTTTAAATTAAAACCTATACACTAA

InterProScan

TIGRFAM
OATP (IPR004156) - T[9-686] 5.7E-110
PANTHER
OATP (IPR004156) - T[11-680] 2.0E-177
SUPERFAMILY
MFS_trans_sf (IPR036259) - T[31-123] 2.22E-24 - T[169-281] 2.22E-24 - T[347-455] 2.22E-24
Pfam
OATP (IPR004156) - T[35-677] 1.3E-124
CDD
MFS_dom (IPR020846) - T[36-224] 3.86097E-6
SUPERFAMILY
Kazal_dom_sf (IPR036058) - T[515-569] 1.43E-7
ProSiteProfiles
Kazal_dom (IPR002350) - T[516-570] 9.951
Pfam
Kazal_dom (IPR002350) - T[526-571] 6.0E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SO1C1_HUMAN 28.757 % 271 1.33E-80
SO1B3_HUMAN 26.609 % 234 2.79E-67
SO2A1_HUMAN 26.377 % 233 2.49E-67